Conservation of cofitness between GFF633 and GFF2132 in Sphingobium sp. HT1-2

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF633 Homoserine dehydrogenase (EC 1.1.1.3) 1.0 GFF2132 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.94 6
Sphingomonas koreensis DSMZ 15582 0.63 Ga0059261_2711 homoserine dehydrogenase (EC 1.1.1.3) (from data) 0.76 Ga0059261_0730 glyceraldehyde-3-phosphate dehydrogenase, type I — —
Rhodospirillum rubrum S1H 0.52 Rru_A2410 Homoserine dehydrogenase (NCBI) 0.62 Rru_A0222 Glyceraldehyde-3-phosphate dehydrogenase, type I (NCBI) — —
Azospirillum brasilense Sp245 0.52 AZOBR_RS07835 homoserine dehydrogenase 0.63 AZOBR_RS10375 glyceraldehyde-3-phosphate dehydrogenase — —
Azospirillum sp. SherDot2 0.51 MPMX19_00805 Homoserine dehydrogenase 0.62 MPMX19_02850 Glyceraldehyde-3-phosphate dehydrogenase 1 — —
Dinoroseobacter shibae DFL-12 0.47 Dshi_2273 Homoserine dehydrogenase (RefSeq) 0.61 Dshi_1742 glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) — —
Bosea sp. OAE506 0.44 ABIE41_RS19165 homoserine dehydrogenase 0.64 ABIE41_RS09420 type I glyceraldehyde-3-phosphate dehydrogenase — —
Sinorhizobium meliloti 1021 0.44 SMc00293 homoserine dehydrogenase 0.67 SMc03979 glyceraldehyde-3-phosphate dehydrogenase 0.87 56
Agrobacterium fabrum C58 0.43 Atu1588 homoserine dehydrogenase 0.67 Atu3737 glyceraldehyde 3-phosphate dehydrogenase — —
Rhizobium sp. OAE497 0.42 ABIE40_RS08650 homoserine dehydrogenase 0.67 ABIE40_RS15870 type I glyceraldehyde-3-phosphate dehydrogenase — —
Magnetospirillum magneticum AMB-1 0.41 AMB_RS18865 homoserine dehydrogenase 0.42 AMB_RS02635 type I glyceraldehyde-3-phosphate dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.40 PGA1_c08650 homoserine dehydrogenase Hom 0.61 PGA1_c27490 glyceraldehyde-3-phosphate dehydrogenase Gap — —
Xanthobacter sp. DMC5 0.40 GFF1323 Homoserine dehydrogenase 0.62 GFF89 Glyceraldehyde-3-phosphate dehydrogenase 1 — —
Marinobacter adhaerens HP15 0.39 HP15_764 homoserine dehydrogenase 0.54 HP15_2175 glyceraldehyde-3-phosphate dehydrogenase, type I — —
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_1290 homoserine dehydrogenase 0.54 Psyr_1108 glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas sp. BP01 0.38 JOY50_RS11710 homoserine dehydrogenase 0.48 JOY50_RS11385 gap type I glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_1290 homoserine dehydrogenase 0.54 Psyr_1108 glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas sp. S08-1 0.38 OH686_17760 Homoserine dehydrogenase 0.48 OH686_04710 glyceraldehyde-3-phosphate dehydrogenase, type I low > 80
Pseudomonas sp. SVBP6 0.38 COO64_RS04935 homoserine dehydrogenase 0.51 COO64_RS04530 gap type I glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas putida KT2440 0.38 PP_1470 Homoserine dehydrogenase 0.48 PP_1009 glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas segetis P6 0.38 MPMX49_01577 Homoserine dehydrogenase 0.54 MPMX49_02842 Glyceraldehyde-3-phosphate dehydrogenase 0.70 39
Pseudomonas simiae WCS417 0.38 PS417_22885 homoserine dehydrogenase 0.54 PS417_22695 glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS24550 homoserine dehydrogenase 0.54 PFLU_RS24335 type I glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas fluorescens SBW25 0.38 PFLU_RS24550 homoserine dehydrogenase 0.54 PFLU_RS24335 type I glyceraldehyde-3-phosphate dehydrogenase low > 109
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_04727 Homoserine dehydrogenase 0.53 GEMAOFIL_04693 Glyceraldehyde-3-phosphate dehydrogenase 1 low > 93
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS10460 homoserine dehydrogenase 0.62 HSERO_RS07125 glyceraldehyde-3-phosphate dehydrogenase — —
Dechlorosoma suillum PS 0.38 Dsui_2907 homoserine dehydrogenase 0.51 Dsui_1560 glyceraldehyde-3-phosphate dehydrogenase, type I — —
Pseudomonas stutzeri RCH2 0.38 Psest_3126 Homoserine dehydrogenase 0.51 Psest_3784 glyceraldehyde-3-phosphate dehydrogenase, type I — —
Pseudomonas sp. RS175 0.38 PFR28_00333 Homoserine dehydrogenase 0.52 PFR28_00560 Glyceraldehyde-3-phosphate dehydrogenase 1 — —
Pseudomonas aeruginosa PA14 0.38 IKLFDK_19075 Homoserine dehydrogenase 0.57 IKLFDK_16235 type I glyceraldehyde-3-phosphate dehydrogenase 0.36 15
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_1723 Homoserine dehydrogenase (EC 1.1.1.3) 0.52 PfGW456L13_1888 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) — —
Rhodopseudomonas palustris CGA009 0.38 TX73_012940 homoserine dehydrogenase 0.63 TX73_004865 type I glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_06375 homoserine dehydrogenase 0.52 AO356_05225 glyceraldehyde-3-phosphate dehydrogenase — —
Pseudomonas sp. DMC3 0.38 GFF1989 Homoserine dehydrogenase 0.53 GFF5153 Glyceraldehyde-3-phosphate dehydrogenase 1 — —
Methylophilus sp. DMC18 0.38 GFF1163 Homoserine dehydrogenase 0.42 GFF1711 Glyceraldehyde-3-phosphate dehydrogenase A — —
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_3143 Homoserine dehydrogenase (EC 1.1.1.3) 0.52 Pf6N2E2_2899 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) — —
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_04355 homoserine dehydrogenase 0.52 AO353_03425 glyceraldehyde-3-phosphate dehydrogenase low > 101
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_3013 Homoserine dehydrogenase (EC 1.1.1.3) 0.52 Pf1N1B4_602 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) — —
Acidovorax sp. GW101-3H11 0.37 Ac3H11_1507 Homoserine dehydrogenase (EC 1.1.1.3) 0.47 Ac3H11_648 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) — —
Variovorax sp. OAS795 0.37 ABID97_RS10890 homoserine dehydrogenase 0.48 ABID97_RS02440 type I glyceraldehyde-3-phosphate dehydrogenase — —
Acinetobacter baumannii LAC-4 0.37 RR41_RS17775 homoserine dehydrogenase 0.43 RR41_RS10005 glyceraldehyde-3-phosphate dehydrogenase — —
Variovorax sp. SCN45 0.37 GFF2801 Homoserine dehydrogenase (EC 1.1.1.3) 0.48 GFF7175 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) — —
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS12540 homoserine dehydrogenase 0.46 RR42_RS17570 glyceraldehyde-3-phosphate dehydrogenase — —
Castellaniella sp019104865 MT123 0.36 ABCV34_RS02295 homoserine dehydrogenase 0.61 ABCV34_RS15455 type I glyceraldehyde-3-phosphate dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF3935 Homoserine dehydrogenase (EC 1.1.1.3) 0.42 GFF1114 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) — —
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_01447 homoserine dehydrogenase 0.66 CCNA_03358 glyceraldehyde 3-phosphate dehydrogenase — —
Caulobacter crescentus NA1000 0.36 CCNA_01447 homoserine dehydrogenase 0.66 CCNA_03358 glyceraldehyde 3-phosphate dehydrogenase — —
Paraburkholderia graminis OAS925 0.35 ABIE53_002026 homoserine dehydrogenase 0.62 ABIE53_003536 glyceraldehyde 3-phosphate dehydrogenase — —
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS08955 homoserine dehydrogenase 0.62 BPHYT_RS16835 glyceraldehyde-3-phosphate dehydrogenase 0.83 41
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS22405 homoserine dehydrogenase 0.61 QEN71_RS27005 type I glyceraldehyde-3-phosphate dehydrogenase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_00810 homoserine dehydrogenase 0.62 H281DRAFT_06315 glyceraldehyde-3-phosphate dehydrogenase (NAD+) — —
Synechocystis sp000284455 PCC 6803 0.34 SGL_RS14120 homoserine dehydrogenase 0.47 SGL_RS07215 type I glyceraldehyde-3-phosphate dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS11445 homoserine dehydrogenase 0.47 ABZR87_RS01435 type I glyceraldehyde-3-phosphate dehydrogenase — —
Ralstonia solanacearum PSI07 0.34 RPSI07_RS17490 homoserine dehydrogenase 0.47 RPSI07_RS11435 type I glyceraldehyde-3-phosphate dehydrogenase — —
Acinetobacter radioresistens SK82 0.33 MPMX26_00167 Homoserine dehydrogenase 0.42 MPMX26_01087 D-erythrose-4-phosphate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS15875 homoserine dehydrogenase 0.47 RALBFv3_RS05865 type I glyceraldehyde-3-phosphate dehydrogenase — —
Ralstonia solanacearum UW163 0.33 UW163_RS13320 homoserine dehydrogenase 0.47 UW163_RS07760 type I glyceraldehyde-3-phosphate dehydrogenase — —
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_2090 thrA homoserine dehydrogenase 0.46 Synpcc7942_1742 gap2 glyceraldehyde-3-phosphate dehydrogenase — —
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU0890 hom homoserine dehydrogenase (TIGR) 0.47 DVU0565 gap-1 glyceraldehyde 3-phosphate dehydrogenase (TIGR) — —
Ralstonia solanacearum GMI1000 0.32 RS_RS06655 homoserine dehydrogenase 0.47 RS_RS13755 aldehyde dehydrogenase — —
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_1412 homoserine dehydrogenase (EC 1.1.1.3) (from data) 0.48 DvMF_1440 glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) low > 51
Bifidobacterium breve UCC2003 0.29 BBR_RS19540 homoserine dehydrogenase 0.38 BBR_RS16790 type I glyceraldehyde-3-phosphate dehydrogenase — —
Mycobacterium tuberculosis H37Rv 0.28 Rv1294 Probable homoserine dehydrogenase ThrA 0.50 Rv1436 Probable glyceraldehyde 3-phosphate dehydrogenase Gap (GAPDH) — —

Not shown: 0 genomes with orthologs for GFF633 only; 56 genomes with orthologs for GFF2132 only