| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF2535 | | FIG003879: Predicted amidohydrolase | 1.0 | GFF2032 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | 0.70 | 17 |
| Variovorax sp. OAS795 | 0.62 | ABID97_RS02000 | | carbon-nitrogen hydrolase family protein | 0.22 | ABID97_RS04045 | | ABC transporter permease | low | > 91 |
| Variovorax sp. SCN45 | 0.62 | GFF5445 | | FIG003879: Uncharacterized subgroup of the nitrilase superfamily | 0.23 | GFF5033 | | ABC-type spermidine/putrescine transport system, permease component II | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.61 | Ac3H11_1207 | | FIG003879: Predicted amidohydrolase | 0.21 | Ac3H11_1612 | | ABC transporter, permease protein | low | > 79 |
| Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS26550 | | carbon-nitrogen hydrolase family protein | 0.45 | QEN71_RS12960 | | ABC transporter permease subunit | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_04689 | | nitrilase | 0.43 | H281DRAFT_05183 | | putrescine transport system permease protein | low | > 103 |
| Castellaniella sp019104865 MT123 | 0.55 | ABCV34_RS02585 | | carbon-nitrogen hydrolase family protein | 0.41 | ABCV34_RS02375 | | ABC transporter permease subunit | low | > 48 |
| Paraburkholderia graminis OAS925 | 0.55 | ABIE53_000852 | | putative amidohydrolase | 0.43 | ABIE53_002367 | | putrescine transport system permease protein | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.54 | BPHYT_RS03545 | | apolipoprotein acyltransferase | 0.49 | BPHYT_RS23135 | | putrescine/spermidine ABC transporter permease | — | — |
| Ralstonia solanacearum UW163 | 0.52 | UW163_RS08175 | | carbon-nitrogen hydrolase family protein | 0.15 | UW163_RS14560 | | ABC transporter permease | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.52 | RALBFv3_RS05450 | | carbon-nitrogen hydrolase family protein | 0.15 | RALBFv3_RS01250 | | ABC transporter permease | — | — |
| Ralstonia solanacearum GMI1000 | 0.52 | RS_RS13310 | | carbon-nitrogen hydrolase family protein | 0.15 | RS_RS08745 | | ABC transporter permease | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.52 | RPSI07_RS11855 | | carbon-nitrogen hydrolase family protein | 0.15 | RPSI07_RS16225 | | ABC transporter permease | low | > 81 |
| Herbaspirillum seropedicae SmR1 | 0.52 | HSERO_RS07150 | | apolipoprotein acyltransferase | 0.18 | HSERO_RS05400 | | polyamine ABC transporter permease | low | > 78 |
| Ralstonia sp. UNC404CL21Col | 0.51 | ABZR87_RS01100 | | carbon-nitrogen hydrolase family protein | 0.20 | ABZR87_RS22470 | | ABC transporter permease | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.41 | Psyr_4157 | | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase | 0.39 | Psyr_4861 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.41 | PfGW456L13_5027 | | FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) | 0.39 | PfGW456L13_932 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.41 | PFLU_RS04335 | | carbon-nitrogen hydrolase family protein | 0.40 | PFLU_RS28755 | | ABC transporter permease subunit | low | > 109 |
| Pseudomonas sp. S08-1 | 0.41 | OH686_08585 | | Uncharacterized subgroup of the nitrilase superfamily | 0.41 | OH686_11445 | | Putrescine transport system permease protein PotI | low | > 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.41 | Psyr_4157 | | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase | 0.39 | Psyr_4861 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.41 | PFLU_RS04335 | | carbon-nitrogen hydrolase family protein | 0.40 | PFLU_RS28755 | | ABC transporter permease subunit | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.41 | AO353_05220 | | carbon-nitrogen hydrolase | 0.41 | AO353_29320 | | putrescine ABC transporter, permease component (from data) | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_3281 | | FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) | 0.39 | Pf6N2E2_4517 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | low | > 103 |
| Pseudomonas sp. RS175 | 0.41 | PFR28_00160 | | Deaminated glutathione amidase | 0.41 | PFR28_04291 | | Inner membrane ABC transporter permease protein YdcV | low | > 88 |
| Pseudomonas putida KT2440 | 0.41 | PP_0939 | | Carbon-nitrogen hydrolase family protein | 0.40 | PP_5177 | | spermidine/putrescine ABC transporter - permease subunit | low | > 96 |
| Pseudomonas simiae WCS417 | 0.41 | PS417_04280 | | carbon-nitrogen hydrolase | 0.40 | PS417_27105 | | spermidine/putrescine ABC transporter permease | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.40 | Pf1N1B4_1093 | | FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) | 0.41 | Pf1N1B4_4350 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_07100 | | carbon-nitrogen hydrolase | 0.39 | AO356_13175 | | spermidine/putrescine ABC transporter permease | low | > 104 |
| Pseudomonas stutzeri RCH2 | 0.40 | Psest_3321 | | Predicted amidohydrolase | 0.41 | Psest_4280 | | ABC-type spermidine/putrescine transport system, permease component II | low | > 67 |
| Marinobacter adhaerens HP15 | 0.38 | HP15_2449 | | nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase | 0.43 | HP15_937 | | spermidine/putrescine ABC transporter, permease protein | low | > 73 |
| Azospirillum sp. SherDot2 | 0.36 | MPMX19_02429 | | Deaminated glutathione amidase | 0.47 | MPMX19_04880 | | Inner membrane ABC transporter permease protein YdcV | low | > 112 |
| Azospirillum brasilense Sp245 | 0.35 | AZOBR_RS02920 | | amidohydrolase | 0.46 | AZOBR_RS08830 | | putrescine/spermidine ABC transporter permease | low | > 97 |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_003100 | | carbon-nitrogen hydrolase family protein | 0.40 | TX73_021555 | | ABC transporter permease subunit | low | > 86 |
| Shewanella loihica PV-4 | 0.34 | Shew_0409 | | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) | 0.41 | Shew_0976 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.32 | CSW01_02215 | | carbon-nitrogen hydrolase family protein | 0.25 | CSW01_07150 | | spermidine/putrescine ABC transporter permease PotC | low | > 62 |
| Shewanella sp. ANA-3 | 0.32 | Shewana3_3642 | | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) | 0.43 | Shewana3_3094 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 73 |
| Rhizobium sp. OAE497 | 0.32 | ABIE40_RS17345 | | carbon-nitrogen hydrolase family protein | 0.40 | ABIE40_RS03280 | | ABC transporter permease subunit | low | > 107 |
| Shewanella oneidensis MR-1 | 0.32 | SO4092 | | hydrolase, carbon-nitrogen family (NCBI ptt file) | 0.44 | SO1273 | | polyamine ABC transporter, permease protein (NCBI ptt file) | low | > 76 |
| Rhodospirillum rubrum S1H | 0.32 | Rru_A0739 | | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (NCBI) | 0.46 | Rru_A1015 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | low | > 58 |
| Serratia liquefaciens MT49 | 0.32 | IAI46_22690 | | carbon-nitrogen hydrolase family protein | 0.43 | IAI46_08385 | | putrescine ABC transporter permease PotI | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.32 | SMc02442 | | hydrolase | 0.41 | SMc00773 | | putrescine ABC transporter permease | low | > 103 |
| Caulobacter crescentus NA1000 | 0.31 | CCNA_00871 | | carbon-nitrogen hydrolase family protein | 0.28 | CCNA_03236 | | spermidine/putrescine transport system permease protein potC | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.31 | CCNA_00871 | | carbon-nitrogen hydrolase family protein | 0.28 | CCNA_03236 | | spermidine/putrescine transport system permease protein potC | low | > 67 |
| Agrobacterium fabrum C58 | 0.31 | Atu3510 | | amidohydrolase | 0.39 | Atu0612 | | ABC transporter, membrane spanning protein | low | > 89 |
| Magnetospirillum magneticum AMB-1 | 0.31 | AMB_RS08115 | | carbon-nitrogen hydrolase family protein | 0.47 | AMB_RS13195 | | putrescine ABC transporter permease PotI | — | — |
| Phaeobacter inhibens DSM 17395 | 0.31 | PGA1_c34700 | | putative carbon-nitrogen hydrolase | 0.40 | PGA1_c34450 | | putrescine transport system permease protein PotI | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.29 | Dshi_3506 | | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) | 0.18 | Dshi_1598 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 64 |
| Shewanella amazonensis SB2B | 0.29 | Sama_0473 | | carbon-nitrogen family hydrolase (RefSeq) | 0.43 | Sama_2639 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 62 |
| Dickeya dianthicola 67-19 | 0.22 | HGI48_RS19475 | | deaminated glutathione amidase | 0.41 | HGI48_RS09495 | | putrescine ABC transporter permease PotI | low | > 71 |
| Pantoea sp. MT58 | 0.22 | IAI47_14065 | | deaminated glutathione amidase | 0.43 | IAI47_13030 | | putrescine ABC transporter permease PotI | low | > 76 |
| Dickeya dadantii 3937 | 0.22 | DDA3937_RS06130 | | deaminated glutathione amidase | 0.42 | DDA3937_RS09475 | | putrescine ABC transporter permease PotI | low | > 74 |
| Dickeya dianthicola ME23 | 0.21 | DZA65_RS06520 | | deaminated glutathione amidase | 0.41 | DZA65_RS09805 | | putrescine ABC transporter permease PotI | low | > 75 |
| Rahnella sp. WP5 | 0.21 | EX31_RS23065 | | deaminated glutathione amidase | 0.42 | EX31_RS09615 | | putrescine ABC transporter permease PotI | low | > 89 |
| Enterobacter asburiae PDN3 | 0.20 | EX28DRAFT_2337 | | Predicted amidohydrolase | 0.41 | EX28DRAFT_2096 | | ABC-type spermidine/putrescine transport system, permease component II | low | > 76 |
| Enterobacter sp. TBS_079 | 0.19 | MPMX20_01285 | | Deaminated glutathione amidase | 0.41 | MPMX20_01498 | | Inner membrane ABC transporter permease protein YdcV | low | > 85 |
| Klebsiella michiganensis M5al | 0.18 | BWI76_RS07990 | | carbon-nitrogen hydrolase | 0.39 | BWI76_RS09475 | | putrescine ABC transporter permease PotI | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.18 | GFF4538 | | Aliphatic amidase AmiE (EC 3.5.1.4) | 0.42 | GFF761 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | low | > 78 |
| Escherichia coli ECRC62 | 0.18 | BNILDI_21795 | tatE | deaminated glutathione amidase | 0.40 | BNILDI_20570 | potH | putrescine ABC transporter permease PotH | — | — |
| Pectobacterium carotovorum WPP14 | 0.18 | HER17_RS04570 | | amidohydrolase | 0.41 | HER17_RS12485 | | putrescine ABC transporter permease PotI | low | > 75 |
| Escherichia coli ECOR38 | 0.18 | HEPCGN_00865 | tatE | deaminated glutathione amidase | 0.39 | HEPCGN_02085 | potI | putrescine ABC transporter permease PotI | low | > 85 |
| Escherichia coli Nissle 1917 | 0.18 | ECOLIN_RS03410 | | deaminated glutathione amidase | 0.40 | ECOLIN_RS04565 | | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECRC102 | 0.18 | NIAGMN_05465 | tatE | deaminated glutathione amidase | 0.40 | NIAGMN_03990 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECRC99 | 0.18 | KEDOAH_20560 | tatE | deaminated glutathione amidase | 0.40 | KEDOAH_21965 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECOR27 | 0.18 | NOLOHH_23785 | tatE | deaminated glutathione amidase | 0.40 | NOLOHH_22315 | potI | putrescine ABC transporter permease PotI | low | > 57 |
| Escherichia coli ECRC101 | 0.18 | OKFHMN_07410 | tatE | deaminated glutathione amidase | 0.40 | OKFHMN_05945 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli BL21 | 0.18 | ECD_00595 | | putative NAD(P)-binding amidase-type enzyme YbeM (C-N hydrolase family) | 0.39 | ECD_00862 | | putrescine ABC transporter permease | low | > 60 |
| Escherichia coli ECRC98 | 0.18 | JDDGAC_11055 | tatE | deaminated glutathione amidase | 0.40 | JDDGAC_09580 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECRC101 | 0.18 | MCAODC_26625 | tatE | deaminated glutathione amidase | 0.40 | MCAODC_25160 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia fergusonii Becca | 0.17 | EFB2_03466 | | Deaminated glutathione amidase | 0.40 | EFB2_03204 | | Inner membrane ABC transporter permease protein YdcV | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.17 | OHPLBJKB_03080 | | Deaminated glutathione amidase | 0.39 | OHPLBJKB_02811 | | Inner membrane ABC transporter permease protein YdcV | low | > 73 |
| Escherichia coli BW25113 | 0.16 | b0219 | yafV | predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) | 0.40 | b0857 | potI | putrescine transporter subunit: membrane component of ABC superfamily (NCBI) | low | > 76 |
| Phocaeicola dorei CL03T12C01 | 0.15 | ABI39_RS16695 | | carbon-nitrogen hydrolase | 0.18 | ABI39_RS17810 | | ABC transporter permease | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.14 | HMPREF1058_RS04375 | | carbon-nitrogen hydrolase | 0.18 | HMPREF1058_RS03230 | | ABC transporter permease | low | > 67 |
| Bacteroides stercoris CC31F | 0.14 | HMPREF1181_RS04595 | | amidohydrolase | 0.20 | HMPREF1181_RS12430 | | ABC transporter permease | low | > 56 |
| Bosea sp. OAE506 | 0.11 | ABIE41_RS22010 | | N-carbamoyl-D-amino-acid hydrolase | 0.35 | ABIE41_RS21635 | | ABC transporter permease subunit | low | > 77 |
Not shown: 20 genomes with orthologs for GFF2535 only; 5 genomes with orthologs for GFF2032 only