Conservation of cofitness between GFF2440 and GFF2017 in Hydrogenophaga sp. GW460-11-11-14-LB1

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF2440 Adenine phosphoribosyltransferase (EC 2.4.2.7) 1.0 GFF2017 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.85 2
Acidovorax sp. GW101-3H11 0.88 Ac3H11_4267 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.62 Ac3H11_4955 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 79
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS02125 adenine phosphoribosyltransferase 0.36 RR42_RS20210 16S rRNA methyltransferase low > 128
Ralstonia solanacearum PSI07 0.73 RPSI07_RS22085 adenine phosphoribosyltransferase 0.42 RPSI07_RS08415 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 81
Ralstonia solanacearum IBSBF1503 0.73 RALBFv3_RS11215 adenine phosphoribosyltransferase 0.42 RALBFv3_RS08860 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Ralstonia solanacearum UW163 0.73 UW163_RS02365 adenine phosphoribosyltransferase 0.42 UW163_RS04750 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS07105 adenine phosphoribosyltransferase 0.42 ABZR87_RS04120 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.43 45
Burkholderia phytofirmans PsJN 0.73 BPHYT_RS02940 adenine phosphoribosyltransferase 0.36 BPHYT_RS19435 16S rRNA methyltransferase low > 109
Ralstonia solanacearum GMI1000 0.72 RS_RS02065 adenine phosphoribosyltransferase 0.41 RS_RS16670 ribosomal RNA small subunit methyltransferase G — —
Paraburkholderia sabiae LMG 24235 0.72 QEN71_RS01790 adenine phosphoribosyltransferase 0.36 QEN71_RS29340 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 153
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_01920 adenine phosphoribosyltransferase 0.37 H281DRAFT_02386 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) low > 103
Paraburkholderia graminis OAS925 0.69 ABIE53_000725 adenine phosphoribosyltransferase 0.37 ABIE53_000263 16S rRNA (guanine527-N7)-methyltransferase low > 113
Castellaniella sp019104865 MT123 0.68 ABCV34_RS14375 adenine phosphoribosyltransferase 0.41 ABCV34_RS11720 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 48
Dechlorosoma suillum PS 0.62 Dsui_2706 adenine phosphoribosyltransferase 0.32 Dsui_0847 16S rRNA (guanine(527)-N(7))-methyltransferase GidB low > 51
Marinobacter adhaerens HP15 0.61 HP15_2549 adenine phosphoribosyltransferase 0.32 HP15_3689 glucose-inhibited division protein B low > 73
Pseudomonas sp. S08-1 0.54 OH686_02250 adenine phosphoribosyltransferase 0.35 OH686_12665 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 80
Shewanella loihica PV-4 0.54 Shew_2236 adenine phosphoribosyltransferase (RefSeq) 0.29 Shew_3855 gidB glucose-inhibited division protein B (RefSeq) low > 60
Serratia liquefaciens MT49 0.52 IAI46_05225 adenine phosphoribosyltransferase 0.31 IAI46_25115 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 86
Dickeya dianthicola ME23 0.52 DZA65_RS06150 adenine phosphoribosyltransferase 0.30 DZA65_RS22365 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Dickeya dadantii 3937 0.52 DDA3937_RS05775 adenine phosphoribosyltransferase 0.31 DDA3937_RS21600 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Rahnella sp. WP5 0.52 EX31_RS22505 adenine phosphoribosyltransferase 0.29 EX31_RS06135 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 89
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_05360 adenine phosphoribosyltransferase 0.33 CSW01_14050 ribosomal RNA small subunit methyltransferase G low > 62
Dickeya dianthicola 67-19 0.52 HGI48_RS05825 adenine phosphoribosyltransferase 0.31 HGI48_RS21385 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 71
Pseudomonas stutzeri RCH2 0.52 Psest_2539 adenine phosphoribosyltransferase 0.31 Psest_4364 16S rRNA (guanine(527)-N(7))-methyltransferase GidB low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_3426 adenine phosphoribosyltransferase 0.35 Psyr_5131 16S rRNA m(7)G-527 methyltransferase low > 86
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_00665 adenine phosphoribosyltransferase 0.37 AO353_10440 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 101
Shewanella amazonensis SB2B 0.51 Sama_1309 adenine phosphoribosyltransferase (RefSeq) 0.29 Sama_3654 gidB 16S rRNA methyltransferase GidB (RefSeq) low > 62
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_3426 adenine phosphoribosyltransferase 0.35 Psyr_5131 16S rRNA m(7)G-527 methyltransferase low > 86
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_3866 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.36 Pf1N1B4_1935 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB — —
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_4072 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.37 PfGW456L13_672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 87
Escherichia coli Nissle 1917 0.51 ECOLIN_RS02790 adenine phosphoribosyltransferase 0.32 ECOLIN_RS21510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli BL21 0.51 ECD_00420 adenine phosphoribosyltransferase 0.32 ECD_03624 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein 0.38 32
Escherichia coli ECOR27 0.51 NOLOHH_01100 apt adenine phosphoribosyltransferase 0.32 NOLOHH_06925 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 57
Escherichia coli ECRC62 0.51 BNILDI_22520 apt adenine phosphoribosyltransferase 0.32 BNILDI_04600 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia fergusonii Becca 0.51 EFB2_03589 Adenine phosphoribosyltransferase 0.32 EFB2_04893 Ribosomal RNA small subunit methyltransferase G low > 86
Pectobacterium carotovorum WPP14 0.51 HER17_RS15710 adenine phosphoribosyltransferase 0.31 HER17_RS21605 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_03205 Adenine phosphoribosyltransferase 0.32 OHPLBJKB_04313 Ribosomal RNA small subunit methyltransferase G low > 73
Escherichia coli BW25113 0.51 b0469 apt adenine phosphoribosyltransferase (NCBI) 0.32 b3740 gidB glucose-inhibited division protein B (NCBI) low > 76
Escherichia coli ECOR38 0.51 HEPCGN_06785 apt adenine phosphoribosyltransferase 0.32 HEPCGN_13505 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.70 27
Escherichia coli ECRC102 0.50 NIAGMN_06225 apt adenine phosphoribosyltransferase 0.32 NIAGMN_12545 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC101 0.50 OKFHMN_08170 apt adenine phosphoribosyltransferase 0.32 OKFHMN_14790 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_02490 adenine phosphoribosyltransferase 0.37 AO356_11670 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 104
Escherichia coli ECRC99 0.50 KEDOAH_19795 apt adenine phosphoribosyltransferase 0.32 KEDOAH_13360 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC101 0.50 MCAODC_27395 apt adenine phosphoribosyltransferase 0.32 MCAODC_05295 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC98 0.50 JDDGAC_11820 apt adenine phosphoribosyltransferase 0.32 JDDGAC_18410 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Pseudomonas sp. RS175 0.50 PFR28_01078 Adenine phosphoribosyltransferase 0.38 PFR28_04586 Ribosomal RNA small subunit methyltransferase G low > 88
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS22400 adenine phosphoribosyltransferase 0.35 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_2324 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.37 Pf6N2E2_4204 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 103
Pseudomonas fluorescens SBW25 0.50 PFLU_RS22400 adenine phosphoribosyltransferase 0.35 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF4387 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.32 GFF1717 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 78
Klebsiella michiganensis M5al 0.50 BWI76_RS06815 adenine phosphoribosyltransferase 0.32 BWI76_RS00225 16S rRNA methyltransferase G low > 92
Erwinia tracheiphila SCR3 0.49 LU632_RS18140 apt adenine phosphoribosyltransferase 0.32 LU632_RS24810 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Alteromonas macleodii MIT1002 0.49 MIT1002_02655 Adenine phosphoribosyltransferase 0.37 MIT1002_04123 Ribosomal RNA small subunit methyltransferase G low > 70
Enterobacter sp. TBS_079 0.49 MPMX20_01071 Adenine phosphoribosyltransferase 0.32 MPMX20_04627 Ribosomal RNA small subunit methyltransferase G low > 85
Pseudomonas simiae WCS417 0.49 PS417_20790 adenine phosphoribosyltransferase 0.35 PS417_28515 16S rRNA methyltransferase low > 88
Pseudomonas putida KT2440 0.49 PP_4266 Adenine phosphoribosyltransferase 0.38 PP_0003 16S RNA methyltransferase low > 96
Shewanella sp. ANA-3 0.49 Shewana3_2447 adenine phosphoribosyltransferase (RefSeq) 0.30 Shewana3_0001 gidB 16S rRNA methyltransferase GidB (RefSeq) low > 73
Dinoroseobacter shibae DFL-12 0.49 Dshi_2074 adenine phosphoribosyltransferase (RefSeq) 0.16 Dshi_3456 methyltransferase GidB (RefSeq) low > 64
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2489 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.33 EX28DRAFT_4016 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 76
Shewanella oneidensis MR-1 0.48 SO2012 apt adenine phosphoribosyltransferase (NCBI ptt file) 0.30 SO4757 gidB glucose-inhibited division protein B (NCBI ptt file) low > 76
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_3222 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.13 Ga0059261_2206 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 68
Pantoea sp. MT58 0.43 IAI47_14480 adenine phosphoribosyltransferase 0.33 IAI47_00295 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 76
Fusobacterium nucleatum SB010 0.39 HUW76_09035 adenine phosphoribosyltransferase 0.17 HUW76_10165 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 35
Lysobacter sp. OAE881 0.38 ABIE51_RS05465 adenine phosphoribosyltransferase 0.32 ABIE51_RS01740 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 62
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_01965 adenine phosphoribosyltransferase 0.38 OKGIIK_15445 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 52
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS19335 adenine phosphoribosyltransferase 0.36 ABZR86_RS14875 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.2273.1 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.30 Xcc-8004.5135.1 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 74
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS04790 adenine phosphoribosyltransferase 0.38 LRK54_RS08680 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 59
Rhodanobacter denitrificans MT42 0.30 LRK55_RS04570 adenine phosphoribosyltransferase 0.38 LRK55_RS08445 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 63
Acinetobacter radioresistens SK82 0.27 MPMX26_02330 Adenine phosphoribosyltransferase 0.33 MPMX26_01214 Ribosomal RNA small subunit methyltransferase G low > 36

Not shown: 19 genomes with orthologs for GFF2440 only; 3 genomes with orthologs for GFF2017 only