Conservation of cofitness between GFF581 and GFF1331 in Hydrogenophaga sp. GW460-11-11-14-LB1

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF581 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 1.0 GFF1331 3-dehydroquinate synthase (EC 4.2.3.4) 0.87 2
Acidovorax sp. GW101-3H11 0.86 Ac3H11_4034 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.71 Ac3H11_4705 3-dehydroquinate synthase (EC 4.2.3.4) 0.80 38
Variovorax sp. OAS795 0.84 ABID97_RS06345 3-deoxy-7-phosphoheptulonate synthase 0.69 ABID97_RS23255 3-dehydroquinate synthase — —
Variovorax sp. SCN45 0.84 GFF4447 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) 0.66 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) low > 127
Ralstonia solanacearum GMI1000 0.62 RS_RS13320 3-deoxy-7-phosphoheptulonate synthase 0.58 RS_RS14880 3-dehydroquinate synthase — —
Ralstonia solanacearum PSI07 0.62 RPSI07_RS11845 3-deoxy-7-phosphoheptulonate synthase 0.58 RPSI07_RS10300 3-dehydroquinate synthase — —
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS01110 3-deoxy-7-phosphoheptulonate synthase AroG 0.57 ABZR87_RS02590 3-dehydroquinate synthase 0.67 46
Ralstonia solanacearum UW163 0.61 UW163_RS08165 3-deoxy-7-phosphoheptulonate synthase 0.58 UW163_RS06680 3-dehydroquinate synthase — —
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS05460 3-deoxy-7-phosphoheptulonate synthase 0.58 RALBFv3_RS06935 3-dehydroquinate synthase — —
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS26560 3-deoxy-7-phosphoheptulonate synthase AroG 0.60 QEN71_RS28035 3-dehydroquinate synthase 0.62 17
Paraburkholderia graminis OAS925 0.60 ABIE53_000850 3-deoxy-7-phosphoheptulonate synthase 0.57 ABIE53_003740 3-dehydroquinate synthase — —
Dechlorosoma suillum PS 0.60 Dsui_3444 phospho-2-dehydro-3-deoxyheptonate aldolase 0.52 Dsui_1095 3-dehydroquinate synthase — —
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS03535 phospho-2-dehydro-3-deoxyheptonate aldolase 0.58 BPHYT_RS17885 3-dehydroquinate synthase 0.81 25
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04687 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.57 H281DRAFT_05615 3-dehydroquinate synthase — —
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS05860 phospho-2-dehydro-3-deoxyheptonate aldolase 0.59 RR42_RS19005 3-dehydroquinate synthase 0.93 1
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_19270 3-deoxy-7-phosphoheptulonate synthase 0.49 CSW01_13300 3-dehydroquinate synthase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.704.1 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) 0.37 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) low > 74
Shewanella sp. ANA-3 0.58 Shewana3_3528 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.49 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) low > 73
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS00390 3-deoxy-7-phosphoheptulonate synthase 0.39 ABZR86_RS10480 3-dehydroquinate synthase low > 74
Rhodanobacter denitrificans FW104-10B01 0.57 LRK54_RS02730 3-deoxy-7-phosphoheptulonate synthase 0.38 LRK54_RS04310 3-dehydroquinate synthase — —
Rhodanobacter denitrificans MT42 0.57 LRK55_RS02485 3-deoxy-7-phosphoheptulonate synthase 0.38 LRK55_RS04085 3-dehydroquinate synthase — —
Erwinia tracheiphila SCR3 0.57 LU632_RS15925 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.47 LU632_RS22865 aroB 3-dehydroquinate synthase low > 74
Enterobacter asburiae PDN3 0.57 EX28DRAFT_2241 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.48 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) low > 76
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_09785 3-deoxy-7-phosphoheptulonate synthase 0.39 OKGIIK_11185 aroB 3-dehydroquinate synthase — —
Shewanella loihica PV-4 0.57 Shew_0851 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.48 Shew_0214 3-dehydroquinate synthase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.57 SO0756 aroG phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive (NCBI ptt file) 0.50 SO0287 aroB 3-dehydroquinate synthase (NCBI ptt file) 0.20 58
Castellaniella sp019104865 MT123 0.57 ABCV34_RS06825 3-deoxy-7-phosphoheptulonate synthase AroG 0.53 ABCV34_RS12705 3-dehydroquinate synthase — —
Klebsiella michiganensis M5al 0.57 BWI76_RS08600 3-deoxy-7-phosphoheptulonate synthase 0.47 BWI76_RS26085 3-dehydroquinate synthase low > 92
Escherichia fergusonii Becca 0.57 EFB2_03352 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.48 EFB2_00439 3-dehydroquinate synthase low > 86
Escherichia coli Nissle 1917 0.57 ECOLIN_RS04015 3-deoxy-7-phosphoheptulonate synthase AroG 0.47 ECOLIN_RS19360 3-dehydroquinate synthase — —
Escherichia coli ECOR38 0.57 HEPCGN_01535 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.48 HEPCGN_15935 aroB 3-dehydroquinate synthase low > 85
Escherichia coli ECRC99 0.56 KEDOAH_21225 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.48 KEDOAH_11025 aroB 3-dehydroquinate synthase — —
Escherichia coli BW25113 0.56 b0754 aroG 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) 0.48 b3389 aroB 3-dehydroquinate synthase (NCBI) 0.21 25
Escherichia coli ECRC101 0.56 OKFHMN_06740 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.48 OKFHMN_17115 aroB 3-dehydroquinate synthase — —
Escherichia coli ECRC98 0.56 JDDGAC_10395 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.48 JDDGAC_20745 aroB 3-dehydroquinate synthase — —
Escherichia coli BL21 0.56 ECD_00707 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible 0.48 ECD_03241 3-dehydroquinate synthase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_02959 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.48 OHPLBJKB_00314 3-dehydroquinate synthase low > 73
Escherichia coli ECRC102 0.56 NIAGMN_04790 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.48 NIAGMN_14885 aroB 3-dehydroquinate synthase — —
Escherichia coli ECRC101 0.56 MCAODC_25960 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.48 MCAODC_07645 aroB 3-dehydroquinate synthase — —
Escherichia coli ECOR27 0.56 NOLOHH_23170 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.48 NOLOHH_08905 aroB 3-dehydroquinate synthase low > 57
Rahnella sp. WP5 0.56 EX31_RS23545 3-deoxy-7-phosphoheptulonate synthase AroG 0.49 EX31_RS04720 3-dehydroquinate synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF8 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.47 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) — —
Enterobacter sp. TBS_079 0.56 MPMX20_01381 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.48 MPMX20_04278 3-dehydroquinate synthase low > 85
Dickeya dadantii 3937 0.56 DDA3937_RS06560 3-deoxy-7-phosphoheptulonate synthase AroG 0.46 DDA3937_RS19545 3-dehydroquinate synthase — —
Pectobacterium carotovorum WPP14 0.56 HER17_RS14805 3-deoxy-7-phosphoheptulonate synthase AroG 0.46 HER17_RS01780 3-dehydroquinate synthase low > 75
Pantoea sp. MT58 0.56 IAI47_13605 3-deoxy-7-phosphoheptulonate synthase AroG 0.50 IAI47_01895 3-dehydroquinate synthase — —
Dickeya dianthicola 67-19 0.56 HGI48_RS06605 3-deoxy-7-phosphoheptulonate synthase AroG 0.46 HGI48_RS19675 3-dehydroquinate synthase — —
Escherichia coli ECRC62 0.56 BNILDI_21165 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.48 BNILDI_02615 aroB 3-dehydroquinate synthase — —
Dickeya dianthicola ME23 0.56 DZA65_RS06960 3-deoxy-7-phosphoheptulonate synthase AroG 0.46 DZA65_RS20760 3-dehydroquinate synthase — —
Serratia liquefaciens MT49 0.56 IAI46_06405 3-deoxy-7-phosphoheptulonate synthase AroG 0.48 IAI46_23700 3-dehydroquinate synthase low > 86
Shewanella amazonensis SB2B 0.55 Sama_0657 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.50 Sama_3367 3-dehydroquinate synthase (RefSeq) low > 62
Caulobacter crescentus NA1000 0.55 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase 0.40 CCNA_03104 3-dehydroquinate synthase low > 66
Caulobacter crescentus NA1000 Δfur 0.55 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase 0.40 CCNA_03104 3-dehydroquinate synthase low > 67
Rhodopseudomonas palustris CGA009 0.55 TX73_000140 3-deoxy-7-phosphoheptulonate synthase 0.36 TX73_002610 3-dehydroquinate synthase — —
Acinetobacter radioresistens SK82 0.48 MPMX26_01673 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.46 MPMX26_02810 3-dehydroquinate synthase — —
Synechococcus elongatus PCC 7942 0.47 Synpcc7942_2501 aroF phospho-2-dehydro-3-heoxyheptonate aldolase 0.38 Synpcc7942_0525 aroB 3-dehydroquinate synthase — —
Pseudomonas putida KT2440 0.47 PP_2324 tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase 0.51 PP_5078 3-dehydroquinate synthase — —
Pseudomonas stutzeri RCH2 0.47 Psest_2331 phospho-2-dehydro-3-deoxyheptonate aldolase 0.50 Psest_3713 3-dehydroquinate synthase — —
Pseudomonas simiae WCS417 0.47 PS417_08430 phospho-2-dehydro-3-deoxyheptonate aldolase 0.50 PS417_01985 3-dehydroquinate synthase — —
Pseudomonas fluorescens SBW25 0.47 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.50 PFLU_RS02030 3-dehydroquinate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.50 PFLU_RS02030 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_19030 phospho-2-dehydro-3-deoxyheptonate aldolase 0.50 AO353_12505 3-dehydroquinate synthase — —
Pseudomonas sp. RS175 0.47 PFR28_00962 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.50 PFR28_05013 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_289 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.51 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.49 Psyr_0409 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_2470 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.51 Pf6N2E2_3754 3-dehydroquinate synthase (EC 4.2.3.4) — —
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.49 Psyr_0409 3-dehydroquinate synthase — —
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_2224 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.51 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4) low > 87
Alteromonas macleodii MIT1002 0.46 MIT1002_01314 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.46 MIT1002_00447 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_03200 phospho-2-dehydro-3-deoxyheptonate aldolase 0.51 AO356_09385 3-dehydroquinate synthase — —
Pseudomonas sp. S08-1 0.46 OH686_01760 3-deoxy-7-phosphoheptulonate synthase 0.48 OH686_10015 3-dehydroquinate synthase — —
Marinobacter adhaerens HP15 0.46 HP15_1814 phospho-2-dehydro-3-heoxyheptonate aldolase 0.50 HP15_480 3-dehydroquinate synthase — —
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_1384 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.40 B158DRAFT_0764 3-dehydroquinate synthase (EC 4.2.3.4) low > 40

Not shown: 2 genomes with orthologs for GFF581 only; 16 genomes with orthologs for GFF1331 only