Conservation of cofitness between GFF1871 and GFF1179 in Hydrogenophaga sp. GW460-11-11-14-LB1

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF1871 Hypothetical metal-binding enzyme, YcbL homolog 1.0 GFF1179 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.47 8
Acidovorax sp. GW101-3H11 0.73 Ac3H11_3348 Hypothetical metal-binding enzyme, YcbL homolog 0.79 Ac3H11_2428 Uracil phosphoribosyltransferase (EC 2.4.2.9)
Marinobacter adhaerens HP15 0.65 HP15_1191 metallo-beta-lactamase family protein 0.49 HP15_2306 uracil phosphoribosyltransferase low > 73
Azospirillum sp. SherDot2 0.64 MPMX19_04818 Hydroxyacylglutathione hydrolase GloC 0.51 MPMX19_02205 Uracil phosphoribosyltransferase low > 112
Shewanella sp. ANA-3 0.63 Shewana3_1493 beta-lactamase domain-containing protein (RefSeq) 0.50 Shewana3_2544 upp uracil phosphoribosyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.63 SO3054 metallo-beta-lactamase family protein (NCBI ptt file) 0.50 SO2759 upp uracil phosphoribosyltransferase (NCBI ptt file) low > 76
Caulobacter crescentus NA1000 Δfur 0.62 CCNA_01241 Zn-dependent hydrolase, glyoxalase II family 0.60 CCNA_02351 uracil phosphoribosyltransferase low > 67
Caulobacter crescentus NA1000 0.62 CCNA_01241 Zn-dependent hydrolase, glyoxalase II family 0.60 CCNA_02351 uracil phosphoribosyltransferase low > 66
Dechlorosoma suillum PS 0.62 Dsui_3107 Zn-dependent hydrolase, glyoxylase 0.47 Dsui_2333 uracil phosphoribosyltransferase 0.59 17
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_06415 MBL fold metallo-hydrolase 0.49 CSW01_11345 uracil phosphoribosyltransferase low > 62
Azospirillum brasilense Sp245 0.61 AZOBR_RS19250 hypothetical protein 0.50 AZOBR_RS03150 uracil phosphoribosyltransferase
Serratia liquefaciens MT49 0.61 IAI46_08745 MBL fold metallo-hydrolase 0.49 IAI46_18880 uracil phosphoribosyltransferase low > 86
Dickeya dianthicola 67-19 0.61 HGI48_RS12995 MBL fold metallo-hydrolase 0.51 HGI48_RS06075 uracil phosphoribosyltransferase low > 71
Dickeya dianthicola ME23 0.61 DZA65_RS13455 MBL fold metallo-hydrolase 0.51 DZA65_RS06425 uracil phosphoribosyltransferase low > 75
Dickeya dadantii 3937 0.61 DDA3937_RS12920 MBL fold metallo-hydrolase 0.51 DDA3937_RS06030 uracil phosphoribosyltransferase low > 74
Paraburkholderia graminis OAS925 0.60 ABIE53_000468 hydroxyacylglutathione hydrolase 0.52 ABIE53_001547 uracil phosphoribosyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_02154 Glyoxylase, beta-lactamase superfamily II 0.52 H281DRAFT_04523 uracil phosphoribosyltransferase low > 103
Shewanella loihica PV-4 0.59 Shew_2269 beta-lactamase domain-containing protein (RefSeq) 0.50 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) low > 60
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS19750 MBL fold metallo-hydrolase 0.66 RR42_RS30815 uracil phosphoribosyltransferase low > 128
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS00645 MBL fold metallo-hydrolase 0.52 QEN71_RS24390 uracil phosphoribosyltransferase low > 153
Pectobacterium carotovorum WPP14 0.58 HER17_RS12035 MBL fold metallo-hydrolase 0.50 HER17_RS15460 uracil phosphoribosyltransferase low > 75
Rhodospirillum rubrum S1H 0.58 Rru_A1522 Beta-lactamase-like (NCBI) 0.56 Rru_A2255 Uracil phosphoribosyl transferase (NCBI)
Alteromonas macleodii MIT1002 0.58 MIT1002_03450 Beta-lactamase hydrolase-like protein 0.47 MIT1002_02893 Uracil phosphoribosyltransferase low > 70
Escherichia coli BW25113 0.58 b0927 ycbL predicted metal-binding enzyme (NCBI) 0.50 b2498 upp uracil phosphoribosyltransferase (VIMSS) low > 76
Escherichia coli BL21 0.58 ECD_00931 putative metal-binding enzyme 0.50 ECD_02390 uracil phosphoribosyltransferase 0.41 14
Escherichia coli ECRC101 0.58 MCAODC_24780 gloC hydroxyacylglutathione hydrolase GloC 0.50 MCAODC_12345 upp uracil phosphoribosyltransferase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_02740 Hydroxyacylglutathione hydrolase GloC 0.50 OHPLBJKB_01228 Uracil phosphoribosyltransferase low > 73
Escherichia coli ECRC62 0.58 BNILDI_20205 gloC hydroxyacylglutathione hydrolase GloC 0.50 BNILDI_12275 upp uracil phosphoribosyltransferase
Escherichia coli ECOR27 0.58 NOLOHH_21950 gloC hydroxyacylglutathione hydrolase GloC 0.50 NOLOHH_13465 upp uracil phosphoribosyltransferase
Escherichia coli ECRC102 0.58 NIAGMN_03110 gloC hydroxyacylglutathione hydrolase GloC 0.50 NIAGMN_19585 upp uracil phosphoribosyltransferase
Shewanella amazonensis SB2B 0.58 Sama_2142 metallo-beta-lactamase family protein (RefSeq) 0.49 Sama_2096 upp uracil phosphoribosyltransferase (RefSeq) low > 62
Escherichia coli ECRC99 0.58 KEDOAH_22345 gloC hydroxyacylglutathione hydrolase GloC 0.50 KEDOAH_06405 upp uracil phosphoribosyltransferase
Escherichia coli Nissle 1917 0.58 ECOLIN_RS04905 hydroxyacylglutathione hydrolase GloC 0.50 ECOLIN_RS14185 uracil phosphoribosyltransferase
Escherichia fergusonii Becca 0.58 EFB2_03137 Hydroxyacylglutathione hydrolase GloC 0.50 EFB2_01400 Uracil phosphoribosyltransferase low > 86
Escherichia coli ECRC101 0.58 OKFHMN_05390 gloC hydroxyacylglutathione hydrolase GloC 0.50 OKFHMN_21815 upp uracil phosphoribosyltransferase
Escherichia coli ECRC98 0.58 JDDGAC_09000 gloC hydroxyacylglutathione hydrolase GloC 0.50 JDDGAC_25760 upp uracil phosphoribosyltransferase
Klebsiella michiganensis M5al 0.57 BWI76_RS09865 MBL fold hydrolase 0.50 BWI76_RS20945 uracil phosphoribosyltransferase low > 92
Escherichia coli ECOR38 0.57 HEPCGN_23135 gloC hydroxyacylglutathione hydrolase GloC 0.50 HEPCGN_20980 upp uracil phosphoribosyltransferase low > 85
Pantoea sp. MT58 0.57 IAI47_12770 MBL fold metallo-hydrolase 0.49 IAI47_05185 uracil phosphoribosyltransferase low > 76
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS03825 MBL fold metallo-hydrolase 0.49 ABZR87_RS15395 uracil phosphoribosyltransferase low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF3684 Hypothetical metal-binding enzyme, YcbL homolog 0.50 GFF2171 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 78
Ralstonia solanacearum PSI07 0.57 RPSI07_RS08720 MBL fold metallo-hydrolase 0.51 RPSI07_RS13695 uracil phosphoribosyltransferase
Ralstonia solanacearum GMI1000 0.57 RS_RS16370 MBL fold metallo-hydrolase 0.51 RS_RS10980 uracil phosphoribosyltransferase
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS01930 hypothetical protein 0.52 BPHYT_RS06415 uracil phosphoribosyltransferase low > 109
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2009 Zn-dependent hydrolases, including glyoxylases 0.50 EX28DRAFT_0170 uracil phosphoribosyltransferase (EC 2.4.2.9) low > 76
Enterobacter sp. TBS_079 0.56 MPMX20_01585 Hydroxyacylglutathione hydrolase GloC 0.50 MPMX20_03352 Uracil phosphoribosyltransferase low > 85
Ralstonia solanacearum UW163 0.55 UW163_RS05105 MBL fold metallo-hydrolase 0.52 UW163_RS10140 uracil phosphoribosyltransferase
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS08505 MBL fold metallo-hydrolase 0.52 RALBFv3_RS03530 uracil phosphoribosyltransferase
Erwinia tracheiphila SCR3 0.55 LU632_RS09895 MBL fold metallo-hydrolase 0.49 LU632_RS08280 upp uracil phosphoribosyltransferase low > 74
Rahnella sp. WP5 0.55 EX31_RS18150 MBL fold metallo-hydrolase 0.50 EX31_RS22700 uracil phosphoribosyltransferase low > 89
Acinetobacter radioresistens SK82 0.54 MPMX26_00296 Hydroxyacylglutathione hydrolase GloC 0.50 MPMX26_02542 Uracil phosphoribosyltransferase low > 36
Sinorhizobium meliloti 1021 0.50 SMc01587 hypothetical protein 0.65 SMc04121 uracil phosphoribosyltransferase low > 103
Agrobacterium fabrum C58 0.50 Atu2201 hydrolase 0.66 Atu0135 uracil phosphoribosyltransferase low > 89
Bosea sp. OAE506 0.49 ABIE41_RS00100 MBL fold metallo-hydrolase 0.67 ABIE41_RS22700 uracil phosphoribosyltransferase
Rhizobium sp. OAE497 0.46 ABIE40_RS12965 MBL fold metallo-hydrolase 0.66 ABIE40_RS00825 uracil phosphoribosyltransferase low > 107
Bacteroides thetaiotaomicron VPI-5482 0.35 BT1146 putative metallo-beta-lactamase (NCBI ptt file) 0.21 BT2791 uracil phosphoribosyltransferase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.35 BACOVA_04039 metallo-beta-lactamase domain protein 0.21 BACOVA_02012 putative uracil phosphoribosyltransferase low > 94
Pontibacter actiniarum KMM 6156, DSM 19842 0.34 CA264_14615 MBL fold hydrolase 0.28 CA264_14760 uracil phosphoribosyltransferase low > 74
Bacteroides stercoris CC31F 0.34 HMPREF1181_RS16810 MBL fold metallo-hydrolase 0.23 HMPREF1181_RS01165 uracil phosphoribosyltransferase low > 56
Echinicola vietnamensis KMM 6221, DSM 17526 0.34 Echvi_2827 Zn-dependent hydrolases, including glyoxylases 0.26 Echvi_0597 Uracil phosphoribosyltransferase low > 79
Pseudomonas putida KT2440 0.33 PP_0772 Metallo-beta-lactamase family protein 0.53 PP_0746 Uracil phosphoribosyltransferase low > 96
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_1623 Hypothetical metal-binding enzyme, YcbL homolog 0.52 PfGW456L13_1597 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 87
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2963 Hypothetical metal-binding enzyme, YcbL homolog 0.51 Pf1N1B4_2934 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 87
Phocaeicola vulgatus CL09T03C04 0.32 HMPREF1058_RS18785 MBL fold metallo-hydrolase 0.22 HMPREF1058_RS10070 uracil phosphoribosyltransferase low > 67
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_15160 MBL fold metallo-hydrolase 0.51 AO353_14855 uracil phosphoribosyltransferase low > 101
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS19735 MBL fold hydrolase 0.21 CA265_RS19460 uracil phosphoribosyltransferase low > 88
Phocaeicola dorei CL03T12C01 0.31 ABI39_RS15105 MBL fold metallo-hydrolase 0.23 ABI39_RS06680 uracil phosphoribosyltransferase low > 72
Pseudomonas fluorescens SBW25 0.31 PFLU_RS04625 MBL fold metallo-hydrolase 0.51 PFLU_RS04485 uracil phosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS04625 MBL fold metallo-hydrolase 0.51 PFLU_RS04485 uracil phosphoribosyltransferase low > 109
Pseudomonas stutzeri RCH2 0.30 Psest_3219 Zn-dependent hydrolases, including glyoxylases 0.50 Psest_1120 uracil phosphoribosyltransferase low > 67
Pseudomonas simiae WCS417 0.30 PS417_04560 beta-lactamase 0.51 PS417_04435 uracil phosphoribosyltransferase low > 88
Pseudomonas sp. S08-1 0.30 OH686_06295 MBL-fold metallo-hydrolase superfamily 0.51 OH686_17985 uracil phosphoribosyltransferase low > 80
Desulfovibrio vulgaris Miyazaki F 0.29 DvMF_2853 beta-lactamase domain protein (RefSeq) 0.47 DvMF_0911 uracil phosphoribosyltransferase (RefSeq) low > 51
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS15120 MBL fold metallo-hydrolase 0.22 HMPREF1078_RS00655 uracil phosphoribosyltransferase low > 61
Desulfovibrio vulgaris Hildenborough JW710 0.26 DVU2765 metallo-beta-lactamase family protein (TIGR) 0.48 DVU1025 upp uracil phosphoribosyltransferase (TIGR)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS20045 MBL fold metallo-hydrolase 0.21 ABZR88_RS00770 uracil phosphoribosyltransferase low > 71
Mycobacterium tuberculosis H37Rv 0.26 Rv2581c Possible glyoxalase II (hydroxyacylglutathione hydrolase) (GLX II) 0.39 Rv3309c Probable uracil phosphoribosyltransferase Upp (UMP pyrophosphorylase) (uprtase) (UMP diphosphorylase) low > 58
Fusobacterium nucleatum SB010 0.20 HUW76_06550 MBL fold metallo-hydrolase 0.53 HUW76_07615 uracil phosphoribosyltransferase low > 35

Not shown: 4 genomes with orthologs for GFF1871 only; 21 genomes with orthologs for GFF1179 only