Conservation of cofitness between PGA1_c29490 and PGA1_c10910 in Phaeobacter inhibens DSM 17395

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c29490 dihydroxy-acid dehydratase LivD 1.0 PGA1_c10910 dihydroorotase PyrC 0.87 16
Sinorhizobium meliloti 1021 0.77 SMc04045 dihydroxy-acid dehydratase 0.70 SMc02166 dihydroorotase 0.88 57
Rhizobium sp. OAE497 0.76 ABIE40_RS08005 dihydroxy-acid dehydratase 0.67 ABIE40_RS02105 dihydroorotase — —
Agrobacterium fabrum C58 0.76 Atu1918 dihydroxy-acid dehydratase 0.68 Atu0399 dihydroorotase — —
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.55 PfGW456L13_1747 Dihydroorotase (EC 3.5.2.3) — —
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_08345 dihydroxy-acid dehydratase 0.54 AO353_04115 dihydroorotase — —
Pseudomonas fluorescens SBW25 0.75 PFLU_RS28535 dihydroxy-acid dehydratase 0.55 PFLU_RS05715 dihydroorotase — —
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS28535 dihydroxy-acid dehydratase 0.55 PFLU_RS05715 dihydroorotase — —
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.55 Pf1N1B4_744 Dihydroorotase (EC 3.5.2.3) — —
Pseudomonas sp. RS175 0.75 PFR28_04278 Dihydroxy-acid dehydratase 0.54 PFR28_03355 Dihydroorotase — —
Pseudomonas simiae WCS417 0.74 PS417_26890 dihydroxy-acid dehydratase 0.55 PS417_05630 dihydroorotase — —
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.54 Pf6N2E2_5588 Dihydroorotase (EC 3.5.2.3) — —
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_13250 dihydroxy-acid dehydratase 0.54 AO356_18315 dihydroorotase — —
Pseudomonas sp. S08-1 0.74 OH686_14100 dihydroxy-acid dehydratase 0.54 OH686_03940 dihydroorotase, homodimeric type — —
Pseudomonas putida KT2440 0.74 PP_5128 Dihydroxy-acid dehydratase 0.55 PP_1086 dihydroorotase — —
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0469 dihydroxyacid dehydratase 0.54 Psyr_3894 dihydroorotase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0469 dihydroxyacid dehydratase 0.54 Psyr_3894 dihydroorotase — —
Pseudomonas stutzeri RCH2 0.74 Psest_0234 dihydroxy-acid dehydratase 0.55 Psest_3123 dihydroorotase, homodimeric type — —
Paraburkholderia sabiae LMG 24235 0.73 QEN71_RS21095 dihydroxy-acid dehydratase 0.58 QEN71_RS26855 dihydroorotase low > 153
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS00240 dihydroxy-acid dehydratase 0.58 ABZR87_RS07550 dihydroorotase — —
Acidovorax sp. GW101-3H11 0.73 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.53 Ac3H11_1963 Dihydroorotase (EC 3.5.2.3) — —
Azospirillum brasilense Sp245 0.73 AZOBR_RS15015 dihydroxy-acid dehydratase 0.56 AZOBR_RS04460 dihydroorotase low > 97
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_00140 dihydroxy-acid dehydratase 0.52 CSW01_18760 dihydroorotase low > 62
Paraburkholderia bryophila 376MFSha3.1 0.72 H281DRAFT_05312 dihydroxyacid dehydratase 0.57 H281DRAFT_04265 dihydroorotase — —
Azospirillum sp. SherDot2 0.72 MPMX19_05356 Dihydroxy-acid dehydratase 0.57 MPMX19_01633 Dihydroorotase — —
Paraburkholderia graminis OAS925 0.72 ABIE53_006513 dihydroxy-acid dehydratase 0.57 ABIE53_003505 dihydroorotase — —
Dechlorosoma suillum PS 0.72 Dsui_1122 dihydroxy-acid dehydratase 0.57 Dsui_0250 dihydroorotase, homodimeric type — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.49 GFF3342 Dihydroorotase (EC 3.5.2.3) low > 78
Escherichia coli Nissle 1917 0.71 ECOLIN_RS21665 dihydroxy-acid dehydratase 0.51 ECOLIN_RS06160 dihydroorotase low > 52
Escherichia fergusonii Becca 0.71 EFB2_04865 Dihydroxy-acid dehydratase 0.52 EFB2_02912 Dihydroorotase low > 86
Alteromonas macleodii MIT1002 0.71 MIT1002_04041 Dihydroxy-acid dehydratase 0.51 MIT1002_03750 Dihydroorotase — —
Enterobacter sp. TBS_079 0.71 MPMX20_04499 Dihydroxy-acid dehydratase 0.52 MPMX20_01741 Dihydroorotase 0.81 61
Escherichia coli BW25113 0.71 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.52 b1062 pyrC dihydroorotase (NCBI) 0.79 71
Escherichia coli ECRC62 0.71 BNILDI_04750 ilvD dihydroxy-acid dehydratase 0.52 BNILDI_19420 pyrC dihydroorotase — —
Escherichia coli ECOR27 0.71 NOLOHH_06775 ilvD dihydroxy-acid dehydratase 0.52 NOLOHH_21260 pyrC dihydroorotase 0.64 20
Escherichia coli ECOR38 0.71 HEPCGN_13350 ilvD dihydroxy-acid dehydratase 0.52 HEPCGN_23760 pyrC dihydroorotase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_04282 Dihydroxy-acid dehydratase 0.52 OHPLBJKB_02603 Dihydroorotase low > 73
Escherichia coli BL21 0.71 ECD_03649 dihydroxyacid dehydratase 0.52 ECD_01058 dihydro-orotase low > 60
Escherichia coli ECRC102 0.71 NIAGMN_12395 ilvD dihydroxy-acid dehydratase 0.52 NIAGMN_24100 pyrC dihydroorotase — —
Escherichia coli ECRC98 0.71 JDDGAC_18260 ilvD dihydroxy-acid dehydratase 0.52 JDDGAC_07390 pyrC dihydroorotase — —
Escherichia coli ECRC101 0.71 MCAODC_05145 ilvD dihydroxy-acid dehydratase 0.52 MCAODC_23090 pyrC dihydroorotase — —
Escherichia coli ECRC101 0.71 OKFHMN_14640 ilvD dihydroxy-acid dehydratase 0.52 OKFHMN_03730 pyrC dihydroorotase — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_4443 dihydroxy-acid dehydratase 0.53 EX28DRAFT_1869 dihydroorotase (EC 3.5.2.3) — —
Escherichia coli ECRC99 0.71 KEDOAH_13510 ilvD dihydroxy-acid dehydratase 0.52 KEDOAH_24025 pyrC dihydroorotase — —
Pectobacterium carotovorum WPP14 0.71 HER17_RS01075 dihydroxy-acid dehydratase 0.54 HER17_RS08600 dihydroorotase 0.97 25
Klebsiella michiganensis M5al 0.71 BWI76_RS00975 dihydroxy-acid dehydratase 0.51 BWI76_RS10990 dihydroorotase low > 92
Pantoea sp. MT58 0.71 IAI47_01035 dihydroxy-acid dehydratase 0.52 IAI47_12215 dihydroorotase 0.79 64
Herbaspirillum seropedicae SmR1 0.70 HSERO_RS02650 dihydroxy-acid dehydratase 0.58 HSERO_RS19235 dihydroorotase — —
Dickeya dadantii 3937 0.70 DDA3937_RS20155 dihydroxy-acid dehydratase 0.57 DDA3937_RS13170 dihydroorotase low > 74
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS10100 dihydroxy-acid dehydratase 0.57 BPHYT_RS16675 dihydroorotase 0.54 81
Dickeya dianthicola 67-19 0.70 HGI48_RS20295 dihydroxy-acid dehydratase 0.56 HGI48_RS13235 dihydroorotase low > 71
Dickeya dianthicola ME23 0.69 DZA65_RS21335 dihydroxy-acid dehydratase 0.56 DZA65_RS13710 dihydroorotase 0.72 51
Serratia liquefaciens MT49 0.69 IAI46_24345 dihydroxy-acid dehydratase 0.54 IAI46_09740 dihydroorotase 0.72 24
Shewanella loihica PV-4 0.69 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.50 Shew_0728 dihydroorotase (RefSeq) low > 60
Shewanella sp. ANA-3 0.69 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.53 Shewana3_3263 dihydroorotase (RefSeq) 0.87 73
Castellaniella sp019104865 MT123 0.69 ABCV34_RS14810 dihydroxy-acid dehydratase 0.53 ABCV34_RS09730 dihydroorotase — —
Shewanella amazonensis SB2B 0.69 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.53 Sama_2870 dihydroorotase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.68 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.52 SO3695 pyrC dihydroorotase, homodimeric type (NCBI ptt file) low > 76
Erwinia tracheiphila SCR3 0.68 LU632_RS24400 ilvD dihydroxy-acid dehydratase 0.52 LU632_RS10340 pyrC dihydroorotase low > 74
Marinobacter adhaerens HP15 0.68 HP15_595 dihydroxy-acid dehydratase 0.54 HP15_1216 dihydroorotase, homodimeric type low > 73
Rahnella sp. WP5 0.66 EX31_RS15005 dihydroxy-acid dehydratase 0.54 EX31_RS24385 dihydroorotase 0.93 57
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.54 GFF523 Dihydroorotase (EC 3.5.2.3) low > 90
Dinoroseobacter shibae DFL-12 0.32 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) 0.73 Dshi_2371 dihydroorotase, homodimeric type (RefSeq) — —
Variovorax sp. OAS795 0.31 ABID97_RS17500 dihydroxy-acid dehydratase 0.54 ABID97_RS06040 dihydroorotase — —
Variovorax sp. SCN45 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.54 GFF4557 Dihydroorotase (EC 3.5.2.3) — —
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS16210 dihydroxy-acid dehydratase 0.59 RR42_RS02610 dihydroorotase — —
Ralstonia solanacearum UW163 0.30 UW163_RS09135 dihydroxy-acid dehydratase 0.57 UW163_RS01995 dihydroorotase — —
Ralstonia solanacearum GMI1000 0.30 RS_RS12105 dihydroxy-acid dehydratase 0.58 RS_RS02420 dihydroorotase — —
Ralstonia solanacearum PSI07 0.30 RPSI07_RS12840 dihydroxy-acid dehydratase 0.58 RPSI07_RS21625 dihydroorotase — —
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS04535 dihydroxy-acid dehydratase 0.57 RALBFv3_RS11590 dihydroorotase — —
Acinetobacter radioresistens SK82 0.30 MPMX26_03019 Dihydroxy-acid dehydratase 0.51 MPMX26_02262 Dihydroorotase — —
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_13600 ilvD dihydroxy-acid dehydratase 0.52 OKGIIK_12970 pyrC dihydroorotase — —
Rhodanobacter denitrificans MT42 0.26 LRK55_RS09960 dihydroxy-acid dehydratase 0.52 LRK55_RS10600 dihydroorotase low > 63
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS10320 dihydroxy-acid dehydratase 0.52 LRK54_RS10900 dihydroorotase — —

Not shown: 28 genomes with orthologs for PGA1_c29490 only; 1 genomes with orthologs for PGA1_c10910 only