Conservation of cofitness between EX31_RS21480 and EX31_RS23440 in Rahnella sp. WP5

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase 1.0 EX31_RS23440 2-oxoglutarate dehydrogenase E1 component 0.48 15
Pectobacterium carotovorum WPP14 0.69 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase 0.85 HER17_RS14930 2-oxoglutarate dehydrogenase E1 component
Serratia liquefaciens MT49 0.65 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase 0.92 IAI46_06275 2-oxoglutarate dehydrogenase E1 component low > 86
Dickeya dadantii 3937 0.63 DDA3937_RS02410 5-formyltetrahydrofolate cyclo-ligase 0.89 DDA3937_RS06460 2-oxoglutarate dehydrogenase E1 component
Dickeya dianthicola 67-19 0.62 HGI48_RS02370 5-formyltetrahydrofolate cyclo-ligase 0.88 HGI48_RS06500 2-oxoglutarate dehydrogenase E1 component
Escherichia coli ECOR38 0.62 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.89 HEPCGN_01305 sucA 2-oxoglutarate dehydrogenase E1 component low > 87
Escherichia coli Nissle 1917 0.62 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase 0.89 ECOLIN_RS03870 2-oxoglutarate dehydrogenase E1 component
Escherichia coli ECRC101 0.62 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.89 MCAODC_26145 sucA 2-oxoglutarate dehydrogenase E1 component low > 87
Escherichia fergusonii Becca 0.62 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase 0.89 EFB2_03380 2-oxoglutarate dehydrogenase E1 component
Escherichia coli ECRC99 0.62 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.89 KEDOAH_21040 sucA 2-oxoglutarate dehydrogenase E1 component
Escherichia coli ECRC102 0.62 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.89 NIAGMN_04975 sucA 2-oxoglutarate dehydrogenase E1 component
Escherichia coli ECOR27 0.62 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.89 NOLOHH_23315 sucA 2-oxoglutarate dehydrogenase E1 component low > 75
Escherichia coli ECRC98 0.62 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.89 JDDGAC_10580 sucA 2-oxoglutarate dehydrogenase E1 component
Escherichia coli ECRC62 0.62 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.89 BNILDI_21310 sucA 2-oxoglutarate dehydrogenase E1 component low > 75
Escherichia coli ECRC100 0.62 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.89 OKFHMN_06925 sucA 2-oxoglutarate dehydrogenase E1 component
Enterobacter sp. TBS_079 0.60 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase 0.89 MPMX20_01354 2-oxoglutarate dehydrogenase E1 component low > 85
Klebsiella michiganensis M5al 0.60 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase 0.89 BWI76_RS08415 2-oxoglutarate dehydrogenase subunit E1
Escherichia coli BL21 0.60 ECD_02743 5-formyltetrahydrofolate cyclo-ligase family protein 0.89 ECD_00685 2-oxoglutarate decarboxylase, thiamine triphosphate-binding
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00804 5-formyltetrahydrofolate cyclo-ligase 0.89 OHPLBJKB_02991 2-oxoglutarate dehydrogenase E1 component low > 73
Escherichia coli BW25113 0.60 b2912 ygfA putative ligase (VIMSS) 0.89 b0726 sucA alpha-ketoglutarate decarboxylase (NCBI) 0.27 56
Dickeya dianthicola ME23 0.59 DZA65_RS02475 5-formyltetrahydrofolate cyclo-ligase 0.88 DZA65_RS06845 2-oxoglutarate dehydrogenase E1 component
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.88 GFF4639 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) low > 78
Pantoea sp. MT58 0.56 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase 0.88 IAI47_13745 2-oxoglutarate dehydrogenase E1 component low > 76
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2964 5,10-methenyltetrahydrofolate synthetase 0.89 EX28DRAFT_2266 2-oxoglutarate dehydrogenase, E1 component
Erwinia tracheiphila SCR3 0.53 LU632_RS05860 5-formyltetrahydrofolate cyclo-ligase 0.87 LU632_RS16095 sucA 2-oxoglutarate dehydrogenase E1 component
Shewanella loihica PV-4 0.52 Shew_3069 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.69 Shew_1655 kgd alpha-ketoglutarate decarboxylase (RefSeq)
Shewanella oneidensis MR-1 0.51 SO0774 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) 0.69 SO1930 sucA 2-oxoglutarate dehydrogenase, E1 component (NCBI ptt file)
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase 0.74 CSW01_10430 2-oxoglutarate dehydrogenase subunit E1
Shewanella sp. ANA-3 0.50 Shewana3_3506 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.69 Shewana3_1710 sucA 2-oxoglutarate dehydrogenase E1 component (RefSeq)
Shewanella amazonensis SB2B 0.41 Sama_2726 5-formyltetrahydrofolate cyclo-ligase family protein (RefSeq) 0.69 Sama_1427 sucA 2-oxoglutarate dehydrogenase E1 component (RefSeq)
Pseudomonas stutzeri RCH2 0.31 Psest_0170 5,10-methenyltetrahydrofolate synthetase 0.58 Psest_2494 2-oxoglutarate dehydrogenase, E1 component
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase 0.59 Psyr_2009 2-oxoglutarate dehydrogenase E1 component
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase 0.59 Psyr_2009 2-oxoglutarate dehydrogenase E1 component
Marinobacter adhaerens HP15 0.28 HP15_3211 5-formyltetrahydrofolate cyclo-ligase 0.59 HP15_1521 alpha-ketoglutarate decarboxylase
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_0528 5-formyltetrahydrofolate cyclo-ligase 0.61 B158DRAFT_1424 2-oxoglutarate dehydrogenase, E1 component
Pseudomonas simiae WCS417 0.28 PS417_27305 5-formyltetrahydrofolate cyclo-ligase 0.59 PS417_08895 2-oxoglutarate dehydrogenase
Pseudomonas fluorescens SBW25 0.27 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.59 PFLU_RS08955 2-oxoglutarate dehydrogenase E1 component
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.59 PFLU_RS08955 2-oxoglutarate dehydrogenase E1 component
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_08780 5-formyltetrahydrofolate cyclo-ligase 0.59 AO353_01835 2-oxoglutarate dehydrogenase subunit E1
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_892 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.60 PfGW456L13_4269 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_2225 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.60 Pf1N1B4_3681 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Pseudomonas putida KT2440 0.25 PP_5203 5-formyltetrahydrofolate cyclo-ligase 0.58 PP_4189 2-oxoglutarate decarboxylase, thiamine-requiring E1 subunit
Pseudomonas sp. RS175 0.25 PFR28_04325 5-formyltetrahydrofolate cyclo-ligase 0.60 PFR28_03096 2-oxoglutarate dehydrogenase E1 component
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_4476 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.59 Pf6N2E2_5855 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_12990 5-formyltetrahydrofolate cyclo-ligase 0.59 AO356_19695 2-oxoglutarate dehydrogenase subunit E1
Sinorhizobium meliloti 1021 0.24 SMc03974 hypothetical protein 0.41 SMc02482 2-oxoglutarate dehydrogenase E1 component
Acinetobacter radioresistens SK82 0.24 MPMX26_02298 5-formyltetrahydrofolate cyclo-ligase 0.57 MPMX26_00751 2-oxoglutarate dehydrogenase E1 component
Pseudomonas sp. S08-1 0.24 OH686_11225 5-formyltetrahydrofolate cyclo-ligase 0.59 OH686_01970 oxoglutarate dehydrogenase (succinyl-transferring), E1 component
Lysobacter sp. OAE881 0.23 ABIE51_RS17355 5-formyltetrahydrofolate cyclo-ligase 0.53 ABIE51_RS08990 2-oxoglutarate dehydrogenase E1 component
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.1138.1 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.53 Xcc-8004.3412.1 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Agrobacterium fabrum C58 0.22 Atu3731 5-formyltetrahydrofolate cyclo-ligase 0.42 Atu2636 oxoglutarate dehydrogenase E1 component
Rhodospirillum rubrum S1H 0.22 Rru_A1084 5-formyltetrahydrofolate cyclo-ligase (NCBI) 0.41 Rru_A1213 kgd alpha-ketoglutarate decarboxylase (RefSeq)
Rhodanobacter sp. FW510-T8 0.20 OKGIIK_12225 5-formyltetrahydrofolate cyclo-ligase 0.53 OKGIIK_05940 sucA 2-oxoglutarate dehydrogenase E1 component
Rhodopseudomonas palustris CGA009 0.19 TX73_023120 5-formyltetrahydrofolate cyclo-ligase 0.41 TX73_000980 2-oxoglutarate dehydrogenase E1 component low > 86
Pontibacter actiniarum KMM 6156, DSM 19842 0.19 CA264_15880 5-formyltetrahydrofolate cyclo-ligase 0.39 CA264_18485 2-oxoglutarate dehydrogenase subunit E1
Sphingomonas koreensis DSMZ 15582 0.19 Ga0059261_0735 5,10-methenyltetrahydrofolate synthetase 0.39 Ga0059261_1341 2-oxoglutarate dehydrogenase, E1 component
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_03354 5-formyltetrahydrofolate cyclo-ligase 0.43 CCNA_00342 2-oxoglutarate dehydrogenase E1 component
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS11670 5-formyltetrahydrofolate cyclo-ligase 0.53 LRK54_RS00950 2-oxoglutarate dehydrogenase E1 component
Caulobacter crescentus NA1000 0.19 CCNA_03354 5-formyltetrahydrofolate cyclo-ligase 0.43 CCNA_00342 2-oxoglutarate dehydrogenase E1 component
Rhodanobacter denitrificans MT42 0.19 LRK55_RS11395 5-formyltetrahydrofolate cyclo-ligase 0.53 LRK55_RS00725 2-oxoglutarate dehydrogenase E1 component
Azospirillum brasilense Sp245 0.18 AZOBR_RS09025 5-formyltetrahydrofolate cyclo-ligase 0.44 AZOBR_RS14075 MFS transporter
Herbaspirillum seropedicae SmR1 0.17 HSERO_RS21420 5-formyltetrahydrofolate cyclo-ligase 0.53 HSERO_RS14885 2-oxoglutarate dehydrogenase E1
Magnetospirillum magneticum AMB-1 0.17 AMB_RS16280 5-formyltetrahydrofolate cyclo-ligase 0.40 AMB_RS20040 2-oxoglutarate dehydrogenase E1 component
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS11995 5-formyltetrahydrofolate cyclo-ligase 0.52 ABZR86_RS05920 2-oxoglutarate dehydrogenase E1 component
Bosea sp. OAE506 0.16 ABIE41_RS09445 5-formyltetrahydrofolate cyclo-ligase 0.41 ABIE41_RS08975 2-oxoglutarate dehydrogenase E1 component
Ralstonia sp. UNC404CL21Col 0.15 ABZR87_RS04880 5-formyltetrahydrofolate cyclo-ligase 0.53 ABZR87_RS11110 2-oxoglutarate dehydrogenase E1 component
Castellaniella sp019104865 MT123 0.15 ABCV34_RS13555 5-formyltetrahydrofolate cyclo-ligase 0.52 ABCV34_RS01720 2-oxoglutarate dehydrogenase E1 component
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS28640 5-formyltetrahydrofolate cyclo-ligase 0.54 QEN71_RS23060 2-oxoglutarate dehydrogenase E1 component
Dinoroseobacter shibae DFL-12 0.15 Dshi_2769 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.41 Dshi_2883 2-oxoglutarate dehydrogenase, E1 subunit (RefSeq)
Phaeobacter inhibens DSM 17395 0.13 PGA1_c21820 5-formyltetrahydrofolate cycloligase-like protein 0.41 PGA1_c03600 2-oxoglutarate dehydrogenase E1 component SucA
Cupriavidus basilensis FW507-4G11 0.13 RR42_RS01400 5-formyltetrahydrofolate cyclo-ligase 0.54 RR42_RS12940 2-oxoglutarate dehydrogenase
Azospirillum sp. SherDot2 0.12 MPMX19_00693 5-formyltetrahydrofolate cyclo-ligase 0.43 MPMX19_00104 2-oxoglutarate dehydrogenase E1 component

Not shown: 7 genomes with orthologs for EX31_RS21480 only; 17 genomes with orthologs for EX31_RS23440 only