Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Rahnella sp. WP5 | 1.0 | EX31_RS21480 | | 5-formyltetrahydrofolate cyclo-ligase | 1.0 | EX31_RS23440 | | 2-oxoglutarate dehydrogenase E1 component | 0.48 | 15 |
Pectobacterium carotovorum WPP14 | 0.69 | HER17_RS19095 | | 5-formyltetrahydrofolate cyclo-ligase | 0.85 | HER17_RS14930 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Serratia liquefaciens MT49 | 0.65 | IAI46_20895 | | 5-formyltetrahydrofolate cyclo-ligase | 0.92 | IAI46_06275 | | 2-oxoglutarate dehydrogenase E1 component | low | > 86 |
Dickeya dadantii 3937 | 0.63 | DDA3937_RS02410 | | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | DDA3937_RS06460 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Dickeya dianthicola 67-19 | 0.62 | HGI48_RS02370 | | 5-formyltetrahydrofolate cyclo-ligase | 0.88 | HGI48_RS06500 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Escherichia coli ECOR38 | 0.62 | HEPCGN_18775 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | HEPCGN_01305 | sucA | 2-oxoglutarate dehydrogenase E1 component | low | > 87 |
Escherichia coli Nissle 1917 | 0.62 | ECOLIN_RS16205 | | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | ECOLIN_RS03870 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Escherichia coli ECRC101 | 0.62 | MCAODC_10005 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | MCAODC_26145 | sucA | 2-oxoglutarate dehydrogenase E1 component | low | > 87 |
Escherichia fergusonii Becca | 0.62 | EFB2_00991 | | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | EFB2_03380 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Escherichia coli ECRC99 | 0.62 | KEDOAH_08655 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | KEDOAH_21040 | sucA | 2-oxoglutarate dehydrogenase E1 component | — | — |
Escherichia coli ECRC102 | 0.62 | NIAGMN_17250 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | NIAGMN_04975 | sucA | 2-oxoglutarate dehydrogenase E1 component | — | — |
Escherichia coli ECOR27 | 0.62 | NOLOHH_11395 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | NOLOHH_23315 | sucA | 2-oxoglutarate dehydrogenase E1 component | low | > 75 |
Escherichia coli ECRC98 | 0.62 | JDDGAC_23125 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | JDDGAC_10580 | sucA | 2-oxoglutarate dehydrogenase E1 component | — | — |
Escherichia coli ECRC62 | 0.62 | BNILDI_09930 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | BNILDI_21310 | sucA | 2-oxoglutarate dehydrogenase E1 component | low | > 75 |
Escherichia coli ECRC100 | 0.62 | OKFHMN_19485 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | OKFHMN_06925 | sucA | 2-oxoglutarate dehydrogenase E1 component | — | — |
Enterobacter sp. TBS_079 | 0.60 | MPMX20_03770 | | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | MPMX20_01354 | | 2-oxoglutarate dehydrogenase E1 component | low | > 85 |
Klebsiella michiganensis M5al | 0.60 | BWI76_RS23915 | | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | BWI76_RS08415 | | 2-oxoglutarate dehydrogenase subunit E1 | — | — |
Escherichia coli BL21 | 0.60 | ECD_02743 | | 5-formyltetrahydrofolate cyclo-ligase family protein | 0.89 | ECD_00685 | | 2-oxoglutarate decarboxylase, thiamine triphosphate-binding | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.60 | OHPLBJKB_00804 | | 5-formyltetrahydrofolate cyclo-ligase | 0.89 | OHPLBJKB_02991 | | 2-oxoglutarate dehydrogenase E1 component | low | > 73 |
Escherichia coli BW25113 | 0.60 | b2912 | ygfA | putative ligase (VIMSS) | 0.89 | b0726 | sucA | alpha-ketoglutarate decarboxylase (NCBI) | 0.27 | 56 |
Dickeya dianthicola ME23 | 0.59 | DZA65_RS02475 | | 5-formyltetrahydrofolate cyclo-ligase | 0.88 | DZA65_RS06845 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF3012 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.88 | GFF4639 | | 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) | low | > 78 |
Pantoea sp. MT58 | 0.56 | IAI47_03730 | | 5-formyltetrahydrofolate cyclo-ligase | 0.88 | IAI47_13745 | | 2-oxoglutarate dehydrogenase E1 component | low | > 76 |
Enterobacter asburiae PDN3 | 0.55 | EX28DRAFT_2964 | | 5,10-methenyltetrahydrofolate synthetase | 0.89 | EX28DRAFT_2266 | | 2-oxoglutarate dehydrogenase, E1 component | — | — |
Erwinia tracheiphila SCR3 | 0.53 | LU632_RS05860 | | 5-formyltetrahydrofolate cyclo-ligase | 0.87 | LU632_RS16095 | sucA | 2-oxoglutarate dehydrogenase E1 component | — | — |
Shewanella loihica PV-4 | 0.52 | Shew_3069 | | 5-formyltetrahydrofolate cyclo-ligase (RefSeq) | 0.69 | Shew_1655 | kgd | alpha-ketoglutarate decarboxylase (RefSeq) | — | — |
Shewanella oneidensis MR-1 | 0.51 | SO0774 | | 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) | 0.69 | SO1930 | sucA | 2-oxoglutarate dehydrogenase, E1 component (NCBI ptt file) | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.51 | CSW01_12545 | | 5-formyltetrahydrofolate cyclo-ligase | 0.74 | CSW01_10430 | | 2-oxoglutarate dehydrogenase subunit E1 | — | — |
Shewanella sp. ANA-3 | 0.50 | Shewana3_3506 | | 5-formyltetrahydrofolate cyclo-ligase (RefSeq) | 0.69 | Shewana3_1710 | sucA | 2-oxoglutarate dehydrogenase E1 component (RefSeq) | — | — |
Shewanella amazonensis SB2B | 0.41 | Sama_2726 | | 5-formyltetrahydrofolate cyclo-ligase family protein (RefSeq) | 0.69 | Sama_1427 | sucA | 2-oxoglutarate dehydrogenase E1 component (RefSeq) | — | — |
Pseudomonas stutzeri RCH2 | 0.31 | Psest_0170 | | 5,10-methenyltetrahydrofolate synthetase | 0.58 | Psest_2494 | | 2-oxoglutarate dehydrogenase, E1 component | — | — |
Pseudomonas syringae pv. syringae B728a | 0.29 | Psyr_0317 | | 5-formyltetrahydrofolate cyclo-ligase | 0.59 | Psyr_2009 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.29 | Psyr_0317 | | 5-formyltetrahydrofolate cyclo-ligase | 0.59 | Psyr_2009 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Marinobacter adhaerens HP15 | 0.28 | HP15_3211 | | 5-formyltetrahydrofolate cyclo-ligase | 0.59 | HP15_1521 | | alpha-ketoglutarate decarboxylase | — | — |
Kangiella aquimarina DSM 16071 | 0.28 | B158DRAFT_0528 | | 5-formyltetrahydrofolate cyclo-ligase | 0.61 | B158DRAFT_1424 | | 2-oxoglutarate dehydrogenase, E1 component | — | — |
Pseudomonas simiae WCS417 | 0.28 | PS417_27305 | | 5-formyltetrahydrofolate cyclo-ligase | 0.59 | PS417_08895 | | 2-oxoglutarate dehydrogenase | — | — |
Pseudomonas fluorescens SBW25 | 0.27 | PFLU_RS28965 | | 5-formyltetrahydrofolate cyclo-ligase | 0.59 | PFLU_RS08955 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.27 | PFLU_RS28965 | | 5-formyltetrahydrofolate cyclo-ligase | 0.59 | PFLU_RS08955 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.26 | AO353_08780 | | 5-formyltetrahydrofolate cyclo-ligase | 0.59 | AO353_01835 | | 2-oxoglutarate dehydrogenase subunit E1 | — | — |
Pseudomonas fluorescens GW456-L13 | 0.26 | PfGW456L13_892 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.60 | PfGW456L13_4269 | | 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.25 | Pf1N1B4_2225 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.60 | Pf1N1B4_3681 | | 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) | — | — |
Pseudomonas putida KT2440 | 0.25 | PP_5203 | | 5-formyltetrahydrofolate cyclo-ligase | 0.58 | PP_4189 | | 2-oxoglutarate decarboxylase, thiamine-requiring E1 subunit | — | — |
Pseudomonas sp. RS175 | 0.25 | PFR28_04325 | | 5-formyltetrahydrofolate cyclo-ligase | 0.60 | PFR28_03096 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.24 | Pf6N2E2_4476 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.59 | Pf6N2E2_5855 | | 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.24 | AO356_12990 | | 5-formyltetrahydrofolate cyclo-ligase | 0.59 | AO356_19695 | | 2-oxoglutarate dehydrogenase subunit E1 | — | — |
Sinorhizobium meliloti 1021 | 0.24 | SMc03974 | | hypothetical protein | 0.41 | SMc02482 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Acinetobacter radioresistens SK82 | 0.24 | MPMX26_02298 | | 5-formyltetrahydrofolate cyclo-ligase | 0.57 | MPMX26_00751 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Pseudomonas sp. S08-1 | 0.24 | OH686_11225 | | 5-formyltetrahydrofolate cyclo-ligase | 0.59 | OH686_01970 | | oxoglutarate dehydrogenase (succinyl-transferring), E1 component | — | — |
Lysobacter sp. OAE881 | 0.23 | ABIE51_RS17355 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | ABIE51_RS08990 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.23 | Xcc-8004.1138.1 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.53 | Xcc-8004.3412.1 | | 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) | — | — |
Agrobacterium fabrum C58 | 0.22 | Atu3731 | | 5-formyltetrahydrofolate cyclo-ligase | 0.42 | Atu2636 | | oxoglutarate dehydrogenase E1 component | — | — |
Rhodospirillum rubrum S1H | 0.22 | Rru_A1084 | | 5-formyltetrahydrofolate cyclo-ligase (NCBI) | 0.41 | Rru_A1213 | kgd | alpha-ketoglutarate decarboxylase (RefSeq) | — | — |
Rhodanobacter sp. FW510-T8 | 0.20 | OKGIIK_12225 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | OKGIIK_05940 | sucA | 2-oxoglutarate dehydrogenase E1 component | — | — |
Rhodopseudomonas palustris CGA009 | 0.19 | TX73_023120 | | 5-formyltetrahydrofolate cyclo-ligase | 0.41 | TX73_000980 | | 2-oxoglutarate dehydrogenase E1 component | low | > 86 |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.19 | CA264_15880 | | 5-formyltetrahydrofolate cyclo-ligase | 0.39 | CA264_18485 | | 2-oxoglutarate dehydrogenase subunit E1 | — | — |
Sphingomonas koreensis DSMZ 15582 | 0.19 | Ga0059261_0735 | | 5,10-methenyltetrahydrofolate synthetase | 0.39 | Ga0059261_1341 | | 2-oxoglutarate dehydrogenase, E1 component | — | — |
Caulobacter crescentus NA1000 Δfur | 0.19 | CCNA_03354 | | 5-formyltetrahydrofolate cyclo-ligase | 0.43 | CCNA_00342 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.19 | LRK54_RS11670 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | LRK54_RS00950 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Caulobacter crescentus NA1000 | 0.19 | CCNA_03354 | | 5-formyltetrahydrofolate cyclo-ligase | 0.43 | CCNA_00342 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Rhodanobacter denitrificans MT42 | 0.19 | LRK55_RS11395 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | LRK55_RS00725 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Azospirillum brasilense Sp245 | 0.18 | AZOBR_RS09025 | | 5-formyltetrahydrofolate cyclo-ligase | 0.44 | AZOBR_RS14075 | | MFS transporter | — | — |
Herbaspirillum seropedicae SmR1 | 0.17 | HSERO_RS21420 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | HSERO_RS14885 | | 2-oxoglutarate dehydrogenase E1 | — | — |
Magnetospirillum magneticum AMB-1 | 0.17 | AMB_RS16280 | | 5-formyltetrahydrofolate cyclo-ligase | 0.40 | AMB_RS20040 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.16 | ABZR86_RS11995 | | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | ABZR86_RS05920 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Bosea sp. OAE506 | 0.16 | ABIE41_RS09445 | | 5-formyltetrahydrofolate cyclo-ligase | 0.41 | ABIE41_RS08975 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Ralstonia sp. UNC404CL21Col | 0.15 | ABZR87_RS04880 | | 5-formyltetrahydrofolate cyclo-ligase | 0.53 | ABZR87_RS11110 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Castellaniella sp019104865 MT123 | 0.15 | ABCV34_RS13555 | | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | ABCV34_RS01720 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Paraburkholderia sabiae LMG 24235 | 0.15 | QEN71_RS28640 | | 5-formyltetrahydrofolate cyclo-ligase | 0.54 | QEN71_RS23060 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Dinoroseobacter shibae DFL-12 | 0.15 | Dshi_2769 | | 5-formyltetrahydrofolate cyclo-ligase (RefSeq) | 0.41 | Dshi_2883 | | 2-oxoglutarate dehydrogenase, E1 subunit (RefSeq) | — | — |
Phaeobacter inhibens DSM 17395 | 0.13 | PGA1_c21820 | | 5-formyltetrahydrofolate cycloligase-like protein | 0.41 | PGA1_c03600 | | 2-oxoglutarate dehydrogenase E1 component SucA | — | — |
Cupriavidus basilensis FW507-4G11 | 0.13 | RR42_RS01400 | | 5-formyltetrahydrofolate cyclo-ligase | 0.54 | RR42_RS12940 | | 2-oxoglutarate dehydrogenase | — | — |
Azospirillum sp. SherDot2 | 0.12 | MPMX19_00693 | | 5-formyltetrahydrofolate cyclo-ligase | 0.43 | MPMX19_00104 | | 2-oxoglutarate dehydrogenase E1 component | — | — |
Not shown: 7 genomes with orthologs for EX31_RS21480 only; 17 genomes with orthologs for EX31_RS23440 only