Conservation of cofitness between ECD_03281 and ECD_00403 in Escherichia coli BL21

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03281 glycogen synthase 1.0 ECD_00403 ammonium transporter low > 61
Escherichia coli ECRC102 1.00 NIAGMN_14670 glgA glycogen synthase GlgA 1.00 NIAGMN_06315 amtB ammonium transporter AmtB
Escherichia coli ECRC101 1.00 MCAODC_07430 glgA glycogen synthase GlgA 1.00 MCAODC_27485 amtB ammonium transporter AmtB low > 87
Escherichia coli ECOR27 1.00 NOLOHH_08690 glgA glycogen synthase GlgA 1.00 NOLOHH_01195 amtB ammonium transporter AmtB low > 75
Escherichia coli ECRC98 1.00 JDDGAC_20530 glgA glycogen synthase GlgA 1.00 JDDGAC_11915 amtB ammonium transporter AmtB low > 86
Escherichia coli ECRC100 1.00 OKFHMN_16900 glgA glycogen synthase GlgA 1.00 OKFHMN_08260 amtB ammonium transporter AmtB low > 80
Escherichia coli ECRC99 1.00 KEDOAH_11240 glgA glycogen synthase GlgA 1.00 KEDOAH_19705 amtB ammonium transporter AmtB
Escherichia coli Nissle 1917 1.00 ECOLIN_RS19625 glycogen synthase GlgA 0.99 ECOLIN_RS02700 ammonium transporter AmtB low > 55
Escherichia coli BW25113 1.00 b3429 glgA glycogen synthase (NCBI) 1.00 b0451 amtB ammonium transporter (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_02825 glgA glycogen synthase GlgA 1.00 BNILDI_22610 amtB ammonium transporter AmtB 0.59 9
Escherichia coli ECOR38 1.00 HEPCGN_15715 glgA glycogen synthase GlgA 1.00 HEPCGN_06875 amtB ammonium transporter AmtB low > 87
Escherichia fergusonii Becca 1.00 EFB2_00390 Glycogen synthase 0.99 EFB2_03606 Ammonia channel low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00272 Glycogen synthase 1.00 OHPLBJKB_03222 Ammonia channel low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.94 GFF4368 Ammonium transporter low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4118 glycogen/starch synthase, ADP-glucose type 0.90 EX28DRAFT_2518 ammonium transporter low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_04311 Glycogen synthase 0.90 MPMX20_01043 Ammonia channel low > 85
Klebsiella michiganensis M5al 0.92 BWI76_RS26200 starch synthase 0.89 BWI76_RS06605 ammonium transporter low > 92
Pantoea sp. MT58 0.83 IAI47_01695 glycogen synthase GlgA 0.87 IAI47_14580 ammonium transporter AmtB low > 76
Dickeya dadantii 3937 0.81 DDA3937_RS19730 glycogen synthase GlgA 0.70 DDA3937_RS05700 ammonium transporter AmtB low > 74
Dickeya dianthicola 67-19 0.80 HGI48_RS19840 glycogen synthase GlgA 0.74 HGI48_RS05745 ammonium transporter AmtB low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS20915 glycogen synthase GlgA 0.74 DZA65_RS06070 ammonium transporter AmtB low > 75
Pectobacterium carotovorum WPP14 0.79 HER17_RS01500 glycogen synthase GlgA 0.79 HER17_RS15785 ammonium transporter AmtB low > 75
Serratia liquefaciens MT49 0.74 IAI46_23925 glycogen synthase GlgA 0.78 IAI46_05085 ammonium transporter AmtB low > 86
Rahnella sp. WP5 0.71 EX31_RS05010 glycogen synthase GlgA 0.73 EX31_RS22320 ammonium transporter AmtB low > 89
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_04861 starch synthase 0.44 H281DRAFT_02012 ammonium transporter low > 103
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS23430 glycogen synthase GlgA 0.46 QEN71_RS01405 ammonium transporter low > 153
Variovorax sp. SCN45 0.48 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.56 GFF5119 Ammonium transporter low > 127
Variovorax sp. OAS795 0.48 ABID97_RS04535 glycogen synthase GlgA 0.51 ABID97_RS03635 ammonium transporter low > 91
Rhodopseudomonas palustris CGA009 0.45 TX73_001985 glycogen synthase GlgA 0.44 TX73_001435 ammonium transporter low > 86
Paraburkholderia graminis OAS925 0.45 ABIE53_001742 starch synthase 0.44 ABIE53_000655 Amt family ammonium transporter low > 113
Azospirillum brasilense Sp245 0.45 AZOBR_RS00855 glycogen synthase 0.43 AZOBR_RS00845 ammonia channel protein
Azospirillum sp. SherDot2 0.43 MPMX19_02225 Glycogen synthase 0.43 MPMX19_02223 Ammonia channel
Magnetospirillum magneticum AMB-1 0.43 AMB_RS10650 glycogen synthase 0.41 AMB_RS00080 ammonium transporter
Marinobacter adhaerens HP15 0.42 HP15_1713 glycogen/starch synthase, ADP-glucose type 0.17 HP15_274 ammonium/methylammonium permease low > 73
Sinorhizobium meliloti 1021 0.41 SMc03924 glycogen synthase 0.48 SMc03807 ammonium transporter low > 103
Rhodospirillum rubrum S1H 0.40 Rru_A2245 Glycogen/starch synthases, ADP-glucose type (NCBI) 0.46 Rru_A1129 Ammonium transporter (NCBI)
Agrobacterium fabrum C58 0.39 Atu4075 glycogen synthase 0.41 Atu2758 ammonium transporter low > 89
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS17230 glycogen synthase GlgA 0.56 ABZR87_RS06700 ammonium transporter low > 80
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_2992 Starch (bacterial glycogen) synthase 0.41 Psyr_2277 ammonium transporter low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_2992 Starch (bacterial glycogen) synthase 0.41 Psyr_2277 ammonium transporter low > 86
Pseudomonas sp. S08-1 0.37 OH686_01280 Glycogen synthase, ADP-glucose transglucosylase 0.45 OH686_13760 Ammonium transporter low > 80
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_23775 glycogen synthase 0.42 AO353_09070 ammonia channel protein low > 101
Pseudomonas sp. RS175 0.36 PFR28_02145 Glycogen synthase 0.46 PFR28_04382 Ammonia channel low > 88
Ralstonia solanacearum PSI07 0.36 RPSI07_RS00900 glycogen synthase GlgA 0.57 RPSI07_RS22460 ammonia channel protein low > 81
Pseudomonas simiae WCS417 0.36 PS417_14480 glycogen synthase 0.41 PS417_27615 ammonia channel protein low > 88
Pseudomonas fluorescens SBW25 0.36 PFLU_RS16410 glycogen synthase GlgA 0.43 PFLU_RS29300 ammonium transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS16410 glycogen synthase GlgA 0.43 PFLU_RS29300 ammonium transporter low > 109
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_3245 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.42 PfGW456L13_838 Ammonium transporter low > 87
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_1078 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.46 Pf6N2E2_4412 Ammonium transporter low > 103
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_26025 glycogen synthase 0.46 AO356_12705 ammonia channel protein low > 104
Pseudomonas stutzeri RCH2 0.36 Psest_2172 glycogen/starch synthases, ADP-glucose type 0.45 Psest_3772 ammonium transporter low > 67
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_4687 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.43 Pf1N1B4_2167 Ammonium transporter low > 87
Pseudomonas putida KT2440 0.35 PP_4050 glycogen synthase 0.39 PP_5233 ammonium transporter AmtB low > 96
Ralstonia solanacearum UW163 0.35 UW163_RS22835 glycogen synthase GlgA 0.56 UW163_RS02730 ammonia channel protein
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS22290 glycogen synthase GlgA 0.56 RALBFv3_RS10850 ammonia channel protein 0.30 55
Ralstonia solanacearum GMI1000 0.34 RS_RS18320 glycogen synthase 0.57 RS_RS01690 ammonium transporter low > 80
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS12515 glycogen synthase 0.56 HSERO_RS00425 ammonia channel protein low > 78
Bosea sp. OAE506 0.33 ABIE41_RS13060 glycogen synthase GlgA 0.45 ABIE41_RS04755 ammonium transporter low > 77
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.537.1 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.50 Xcc-8004.249.1 Ammonium transporter low > 74
Alteromonas macleodii MIT1002 0.30 MIT1002_00235 Glycogen synthase 0.15 MIT1002_00417 Ammonia transporter low > 70
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU2244 glgA glycogen synthase (TIGR) 0.37 DVU1231 amt ammonium transporter (TIGR) low > 55
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_2518 glgA glycogen synthase 0.27 Synpcc7942_2279 amtB ammonium transporter low > 38
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_0841 glycogen/starch synthase, ADP-glucose type (RefSeq) 0.36 DvMF_0866 ammonium transporter (RefSeq) low > 51
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_08685 glycogen synthase 0.14 CSW01_03200 ammonium transporter low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS18980 glycogen synthase 0.33 ABZR88_RS18240 ammonium transporter low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS04140 glycogen synthase 0.32 CA265_RS14975 ammonia channel protein low > 88
Shewanella amazonensis SB2B 0.16 Sama_2449 starch synthase (RefSeq) 0.17 Sama_0651 Rh-like protein/ammonium transporter (RefSeq) 0.45 2
Shewanella oneidensis MR-1 0.15 SO1499 glgA glycogen synthase (NCBI ptt file) 0.18 SO0760 amt ammonium transporter (NCBI ptt file) 0.55 8
Shewanella sp. ANA-3 0.15 Shewana3_2930 starch synthase catalytic subunit (RefSeq) 0.39 Shewana3_0778 ammonium transporter (RefSeq) low > 73
Methanococcus maripaludis S2 0.14 MMP_RS06665 glycogen/starch synthase 0.15 MMP_RS00390 ammonium transporter low > 25
Methanococcus maripaludis JJ 0.14 MMJJ_RS07685 glycogen/starch synthase 0.16 MMJJ_RS05110 ammonium transporter low > 28
Shewanella loihica PV-4 0.13 Shew_1172 starch synthase (RefSeq) 0.19 Shew_0847 Rh family protein/ammonium transporter (RefSeq) low > 60

Not shown: 2 genomes with orthologs for ECD_03281 only; 28 genomes with orthologs for ECD_00403 only