Conservation of cofitness between Dsui_2149 and Dsui_2434 in Dechlorosoma suillum PS

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dechlorosoma suillum PS 1.0 Dsui_2149 DNA helicase, Rad3 1.0 Dsui_2434 excinuclease ABC, B subunit 0.65 15
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS07580 helicase 0.78 RR42_RS05995 excinuclease ABC subunit B 0.66 4
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS14855 helicase 0.76 HSERO_RS15840 excinuclease ABC subunit B low > 78
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS13325 ATP-dependent DNA helicase 0.80 ABZR87_RS09940 excinuclease ABC subunit UvrB low > 80
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS12495 helicase 0.77 BPHYT_RS06905 excinuclease ABC subunit B 0.21 70
Ralstonia solanacearum UW163 0.56 UW163_RS14840 ATP-dependent DNA helicase 0.79 UW163_RS11690 excinuclease ABC subunit UvrB — —
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS01530 ATP-dependent DNA helicase 0.79 RALBFv3_RS14225 excinuclease ABC subunit UvrB low > 76
Ralstonia solanacearum PSI07 0.56 RPSI07_RS15960 ATP-dependent DNA helicase 0.79 RPSI07_RS19240 excinuclease ABC subunit UvrB — —
Ralstonia solanacearum GMI1000 0.56 RS_RS08195 ATP-dependent DNA helicase 0.78 RS_RS05005 UvrABC system protein B 0.32 30
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_00533 ATP-dependent DNA helicase DinG 0.77 H281DRAFT_04973 Excinuclease ABC subunit B low > 103
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS06060 ATP-dependent DNA helicase 0.78 QEN71_RS23870 excinuclease ABC subunit UvrB low > 153
Paraburkholderia graminis OAS925 0.55 ABIE53_002724 ATP-dependent DNA helicase DinG 0.77 ABIE53_001645 excinuclease ABC subunit B 0.51 2
Castellaniella sp019104865 MT123 0.46 ABCV34_RS01875 ATP-dependent DNA helicase 0.71 ABCV34_RS05110 excinuclease ABC subunit UvrB low > 48
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_2492 Rad3-related DNA helicases 0.69 B158DRAFT_2341 Excinuclease ABC subunit B 0.56 12
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_02195 dinG helicase 0.63 OKGIIK_03100 uvrB excinuclease ABC subunit UvrB low > 52
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS12765 ATP-dependent DNA helicase 0.62 LRK54_RS14235 excinuclease ABC subunit UvrB low > 59
Rhodanobacter denitrificans MT42 0.42 LRK55_RS12465 ATP-dependent DNA helicase 0.62 LRK55_RS13955 excinuclease ABC subunit UvrB low > 63
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS19750 ATP-dependent DNA helicase 0.62 ABZR86_RS09750 excinuclease ABC subunit UvrB 0.37 45
Escherichia coli BL21 0.41 ECD_01778 putative ATP-dependent helicase, DinG family 0.63 ECD_00746 exision nuclease of nucleotide excision repair, DNA damage recognition component — —
Escherichia coli ECOR38 0.41 HEPCGN_04970 yoaA putative ATP-dependent DNA helicase YoaA 0.63 HEPCGN_01660 uvrB excinuclease ABC subunit UvrB low > 85
Escherichia coli ECRC98 0.41 JDDGAC_01155 yoaA putative ATP-dependent DNA helicase YoaA 0.63 JDDGAC_10015 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli ECRC101 0.41 OKFHMN_26580 yoaA putative ATP-dependent DNA helicase YoaA 0.63 OKFHMN_06380 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli ECOR27 0.41 NOLOHH_17100 yoaA putative ATP-dependent DNA helicase YoaA 0.63 NOLOHH_22750 uvrB excinuclease ABC subunit UvrB low > 57
Escherichia coli ECRC62 0.41 BNILDI_15885 yoaA putative ATP-dependent DNA helicase YoaA 0.63 BNILDI_21020 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli ECRC99 0.41 KEDOAH_01530 yoaA putative ATP-dependent DNA helicase YoaA 0.63 KEDOAH_21530 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli ECRC102 0.41 NIAGMN_01485 yoaA putative ATP-dependent DNA helicase YoaA 0.63 NIAGMN_04425 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS10055 ATP-dependent DNA helicase 0.63 ECOLIN_RS04150 excinuclease ABC subunit UvrB — —
Escherichia coli ECRC101 0.41 MCAODC_18830 yoaA putative ATP-dependent DNA helicase YoaA 0.63 MCAODC_25595 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_01925 putative ATP-dependent helicase DinG 0.63 OHPLBJKB_02934 UvrABC system protein B low > 73
Escherichia fergusonii Becca 0.41 EFB2_02192 putative ATP-dependent DNA helicase YoaA 0.63 EFB2_03326 UvrABC system protein B low > 86
Escherichia coli BW25113 0.40 b1808 yoaA conserved protein with nucleoside triphosphate hydrolase domain (NCBI) 0.63 b0779 uvrB excinuclease ABC subunit B (NCBI) 0.18 15
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF2823 DinG family ATP-dependent helicase YoaA 0.63 GFF675 Excinuclease ABC subunit B low > 78
Pantoea sp. MT58 0.40 IAI47_08820 ATP-dependent DNA helicase 0.65 IAI47_13505 excinuclease ABC subunit B low > 76
Dickeya dadantii 3937 0.40 DDA3937_RS11240 ATP-dependent DNA helicase 0.65 DDA3937_RS08530 excinuclease ABC subunit B low > 74
Dickeya dianthicola 67-19 0.40 HGI48_RS11275 ATP-dependent DNA helicase 0.64 HGI48_RS08695 excinuclease ABC subunit B low > 71
Enterobacter asburiae PDN3 0.40 EX28DRAFT_0750 Rad3-related DNA helicases 0.64 EX28DRAFT_2211 Excinuclease ABC subunit B low > 76
Dickeya dianthicola ME23 0.40 DZA65_RS11620 ATP-dependent DNA helicase 0.65 DZA65_RS08990 excinuclease ABC subunit B low > 75
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_09930 ATP-dependent DNA helicase 0.65 CSW01_05185 excinuclease ABC subunit UvrB low > 62
Enterobacter sp. TBS_079 0.40 MPMX20_02714 putative ATP-dependent DNA helicase YoaA 0.63 MPMX20_01408 UvrABC system protein B low > 85
Klebsiella michiganensis M5al 0.40 BWI76_RS17815 ATP-dependent helicase 0.64 BWI76_RS08785 excinuclease ABC subunit B low > 92
Pectobacterium carotovorum WPP14 0.40 HER17_RS11290 ATP-dependent DNA helicase 0.66 HER17_RS13420 excinuclease ABC subunit B low > 75
Serratia liquefaciens MT49 0.39 IAI46_14550 ATP-dependent DNA helicase 0.66 IAI46_06550 excinuclease ABC subunit B low > 86
Alteromonas macleodii MIT1002 0.39 MIT1002_02593 putative ATP-dependent helicase DinG 0.66 MIT1002_01261 Excinuclease ABC subunit B low > 70
Erwinia tracheiphila SCR3 0.39 LU632_RS13150 ATP-dependent DNA helicase 0.64 LU632_RS09160 uvrB excinuclease ABC subunit B low > 74
Rahnella sp. WP5 0.39 EX31_RS10615 ATP-dependent DNA helicase 0.66 EX31_RS23720 excinuclease ABC subunit B low > 89
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.1496.1 DinG family ATP-dependent helicase YoaA 0.62 Xcc-8004.2034.1 Excinuclease ABC subunit B low > 74
Variovorax sp. OAS795 0.36 ABID97_RS14180 ATP-dependent DNA helicase 0.72 ABID97_RS13995 excinuclease ABC subunit UvrB low > 91
Lysobacter sp. OAE881 0.36 ABIE51_RS05195 ATP-dependent DNA helicase 0.63 ABIE51_RS15310 excinuclease ABC subunit UvrB low > 62
Acidovorax sp. GW101-3H11 0.36 Ac3H11_2460 DinG family ATP-dependent helicase YoaA 0.73 Ac3H11_4114 Excinuclease ABC subunit B low > 79
Variovorax sp. SCN45 0.36 GFF986 DinG family ATP-dependent helicase YoaA 0.72 GFF945 Excinuclease ABC subunit B low > 127
Shewanella loihica PV-4 0.34 Shew_2196 helicase c2 (RefSeq) 0.66 Shew_2064 excinuclease ABC subunit B (RefSeq) 0.73 8
Shewanella amazonensis SB2B 0.34 Sama_1940 ATP-dependent helicase DinG (RefSeq) 0.65 Sama_1828 excinuclease ABC subunit B (RefSeq) 0.58 12
Shewanella oneidensis MR-1 0.34 SO2081 ATP-dependent helicase, DinG family (NCBI ptt file) 0.66 SO2506 uvrB excinuclease ABC, B subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.33 Shewana3_1859 helicase c2 (RefSeq) 0.66 Shewana3_2166 excinuclease ABC subunit B (RefSeq) low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF4872 DinG family ATP-dependent helicase YoaA 0.73 GFF4962 Excinuclease ABC subunit B low > 90
Mycobacterium tuberculosis H37Rv 0.18 Rv1329c Probable ATP-dependent helicase DinG 0.51 Rv1633 Probable excinuclease ABC (subunit B-helicase) UvrB low > 58
Pseudomonas sp. S08-1 0.16 OH686_04830 ATP-dependent helicase DinG/Rad3 0.66 OH686_04580 excinuclease ABC subunit B low > 80
Pseudomonas fluorescens GW456-L13 0.15 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 0.67 PfGW456L13_3959 Excinuclease ABC subunit B low > 87
Pseudomonas fluorescens FW300-N2E3 0.15 AO353_17020 ATP-dependent DNA helicase DinG 0.67 AO353_20545 excinuclease ABC subunit B 0.66 4
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.67 PFLU_RS20655 excinuclease ABC subunit B low > 109
Pseudomonas fluorescens SBW25 0.15 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.67 PFLU_RS20655 excinuclease ABC subunit B low > 109
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_05425 ATP-dependent DNA helicase DinG 0.68 AO356_21335 excinuclease ABC subunit B 0.84 1
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 0.68 Pf1N1B4_26 Excinuclease ABC subunit B — —
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 0.68 Pf6N2E2_52 Excinuclease ABC subunit B 0.63 3
Pseudomonas simiae WCS417 0.15 PS417_06510 ATP-dependent DNA helicase DinG 0.67 PS417_18685 excinuclease ABC subunit B 0.43 3
Pseudomonas sp. RS175 0.15 PFR28_00520 ATP-dependent DNA helicase DinG 0.68 PFR28_02837 UvrABC system protein B low > 88
Pseudomonas stutzeri RCH2 0.15 Psest_2857 Rad3-related DNA helicases 0.68 Psest_1296 excinuclease ABC, B subunit 0.39 3
Methanococcus maripaludis JJ 0.08 MMJJ_RS08075 ATP-dependent DNA helicase 0.49 MMJJ_RS01245 excinuclease ABC subunit UvrB low > 28
Methanococcus maripaludis S2 0.08 MMP_RS06275 ATP-dependent DNA helicase 0.48 MMP_RS03805 excinuclease ABC subunit UvrB low > 25

Not shown: 0 genomes with orthologs for Dsui_2149 only; 30 genomes with orthologs for Dsui_2434 only