Conservation of cofitness between CSW01_06530 and CSW01_14085 in Vibrio cholerae E7946 ATCC 55056

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06530 aromatic amino acid aminotransferase 1.0 CSW01_14085 transcriptional regulator 0.61 14
Shewanella sp. ANA-3 0.66 Shewana3_2121 aromatic amino acid aminotransferase (RefSeq) 0.70 Shewana3_1155 hypothetical protein (RefSeq) low > 73
Shewanella loihica PV-4 0.66 Shew_1999 aromatic amino acid aminotransferase (RefSeq) 0.73 Shew_3408 hypothetical protein (RefSeq) low > 60
Enterobacter sp. TBS_079 0.66 MPMX20_01586 Aspartate aminotransferase 0.32 MPMX20_02769 putative transcriptional regulatory protein YebC low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.33 EX28DRAFT_0693 DNA-binding regulatory protein, YebC/PmpR family low > 76
Shewanella amazonensis SB2B 0.65 Sama_1805 aromatic amino acid aminotransferase (RefSeq) 0.70 Sama_2410 hypothetical protein (RefSeq) low > 62
Escherichia coli ECRC62 0.65 BNILDI_20195 aspC aspartate transaminase 0.39 BNILDI_14915 ycdB putative transcriptional regulatory protein YcdB low > 75
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS04565 aspartate/tyrosine/aromatic aminotransferase 0.33 PagCFBP13505_RS02315 YebC/PmpR family DNA-binding transcriptional regulator low > 74
Shewanella oneidensis MR-1 0.65 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) 0.69 SO3401 conserved hypothetical protein TIGR01033 (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.65 BWI76_RS09870 aromatic amino acid aminotransferase 0.33 BWI76_RS18160 YebC/PmpR family DNA-binding transcriptional regulator — —
Escherichia coli Nissle 1917 0.65 ECOLIN_RS04910 aspartate transaminase 0.39 ECOLIN_RS11460 YebC/PmpR family DNA-binding transcriptional regulator — —
Erwinia amylovora T8 0.65 OLJFJH_16045 aromatic amino acid aminotransferase 0.30 OLJFJH_12845 YebC/PmpR family DNA-binding transcriptional regulator low > 58
Escherichia fergusonii Becca 0.65 EFB2_03136 Aspartate aminotransferase 0.39 EFB2_01929 putative transcriptional regulatory protein YeeN low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_02738 Aspartate aminotransferase 0.39 OHPLBJKB_01725 putative transcriptional regulatory protein YeeN low > 74
Escherichia coli BL21 0.65 ECD_00932 aspartate aminotransferase, PLP-dependent 0.39 ECD_01895 UPF0082 family protein — —
Escherichia coli BW25113 0.65 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.39 b1983 yeeN hypothetical protein (NCBI) low > 76
Escherichia coli ECOR38 0.65 HEPCGN_23140 aspC aspartate transaminase 0.39 HEPCGN_03510 ycdB putative transcriptional regulatory protein YcdB low > 88
Escherichia coli ECOR27 0.65 NOLOHH_21940 aspC aspartate transaminase 0.39 NOLOHH_16120 ycdB putative transcriptional regulatory protein YcdB — —
Erwinia tracheiphila HP pepo 2.2 0.64 IJEDHG_20410 aromatic amino acid aminotransferase 0.31 IJEDHG_22125 tACO1 YebC/PmpR family DNA-binding transcriptional regulator — —
Klebsiella pneumoniae MKP103 0.64 KDGMDA_18070 Aspartate aminotransferase 0.33 KDGMDA_25425 putative transcriptional regulatory protein KPK_1906 low > 95
Escherichia coli ECRC102 0.64 NIAGMN_03105 aspC aspartate transaminase 0.39 NIAGMN_22680 ycdB putative transcriptional regulatory protein YcdB — —
Erwinia tracheiphila SCR3 0.64 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.31 LU632_RS13425 YebC/PmpR family DNA-binding transcriptional regulator low > 74
Escherichia coli ECRC98 0.64 JDDGAC_08995 aspC aspartate transaminase 0.39 JDDGAC_29305 ycdB putative transcriptional regulatory protein YcdB low > 87
Escherichia coli ECRC100 0.64 OKFHMN_05385 aspC aspartate transaminase 0.39 OKFHMN_25175 ycdB putative transcriptional regulatory protein YcdB low > 79
Escherichia coli ECRC99 0.64 KEDOAH_22350 aspC aspartate transaminase 0.39 KEDOAH_02935 ycdB putative transcriptional regulatory protein YcdB — —
Escherichia coli ECRC101 0.64 MCAODC_24775 aspC aspartate transaminase 0.39 MCAODC_20215 ycdB putative transcriptional regulatory protein YcdB low > 88
Pantoea sp. MT58 0.64 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.33 IAI47_08435 YebC/PmpR family DNA-binding transcriptional regulator low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.38 GFF969 FIG007491: hypothetical protein YeeN low > 78
Rahnella sp. WP5 0.64 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.32 EX31_RS11685 YebC/PmpR family DNA-binding transcriptional regulator low > 89
Dickeya dianthicola 67-19 0.64 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.31 HGI48_RS10095 YebC/PmpR family DNA-binding transcriptional regulator low > 71
Dickeya dadantii 3937 0.63 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.32 DDA3937_RS10065 YebC/PmpR family DNA-binding transcriptional regulator low > 74
Serratia liquefaciens MT49 0.63 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.32 IAI46_14635 YebC/PmpR family DNA-binding transcriptional regulator low > 86
Pectobacterium carotovorum WPP14 0.63 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 0.33 HER17_RS11855 YebC/PmpR family DNA-binding transcriptional regulator low > 75
Dickeya dianthicola ME23 0.63 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.31 DZA65_RS10510 YebC/PmpR family DNA-binding transcriptional regulator low > 75
Pseudomonas segetis P6 0.49 MPMX49_03092 Aromatic-amino-acid aminotransferase 0.27 MPMX49_01682 Transcriptional regulatory protein PmpR low > 75
Pseudomonas putida KT2440 0.47 PP_1972 aromatic-amino-acid aminotransferase 0.27 PP_1214 putative transcriptional regulatory protein low > 96
Pseudomonas sp. BP01 0.47 JOY50_RS16720 amino acid aminotransferase 0.28 JOY50_RS01830 YebC/PmpR family DNA-binding transcriptional regulator low > 84
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.130.1 hypothetical protein 0.29 Xcc-8004.1434.1 FIG000859: hypothetical protein YebC low > 74
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_50 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.31 Pf6N2E2_5534 FIG000859: hypothetical protein YebC low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF4777 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) @ Aspartate aminotransferase (EC 2.6.1.1) 0.27 GFF4523 FIG000859: hypothetical protein YebC — —
Pseudomonas simiae WCS417 0.46 PS417_18690 aromatic amino acid aminotransferase 0.30 PS417_22460 hypothetical protein — —
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS05990 aromatic amino acid aminotransferase 0.33 RR42_RS04735 hypothetical protein low > 128
Pseudomonas sp. DMC3 0.46 GFF773 Aromatic-amino-acid aminotransferase 0.32 GFF5187 Transcriptional regulatory protein PmpR low > 89
Paraburkholderia graminis OAS925 0.46 ABIE53_001644 aromatic-amino-acid transaminase 0.34 ABIE53_001546 YebC/PmpR family DNA-binding regulatory protein low > 113
Acidovorax sp. GW101-3H11 0.46 Ac3H11_4115 Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.29 Ac3H11_2422 FIG000859: hypothetical protein — —
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_3960 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.32 PfGW456L13_1850 FIG000859: hypothetical protein YebC low > 87
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS06900 aspartate aminotransferase 0.33 BPHYT_RS06410 transcriptional regulator low > 109
Pseudomonas stutzeri RCH2 0.46 Psest_1295 Aspartate/tyrosine/aromatic aminotransferase 0.28 Psest_1494 DNA-binding regulatory protein, YebC/PmpR family — —
Pseudomonas sp. SVBP6 0.46 COO64_RS05735 amino acid aminotransferase 0.30 COO64_RS20085 YebC/PmpR family DNA-binding transcriptional regulator low > 93
Pseudomonas fluorescens SBW25 0.46 PFLU_RS20660 aspartate/tyrosine/aromatic aminotransferase 0.30 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS20660 aspartate/tyrosine/aromatic aminotransferase 0.30 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator low > 109
Pseudomonas sp. S08-1 0.46 OH686_04585 Biosynthetic Aromatic amino acid aminotransferase alpha or Aromatic-amino-acid aminotransferase 0.27 OH686_19120 Probable transcriptional regulatory protein YebC low > 80
Ralstonia solanacearum PSI07 0.46 RPSI07_RS19245 aspartate/tyrosine/aromatic aminotransferase 0.32 RPSI07_RS13685 YebC/PmpR family DNA-binding transcriptional regulator — —
Castellaniella sp019104865 MT123 0.46 ABCV34_RS05115 amino acid aminotransferase 0.28 ABCV34_RS02555 YebC/PmpR family DNA-binding transcriptional regulator — —
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS23875 amino acid aminotransferase 0.32 QEN71_RS24395 YebC/PmpR family DNA-binding transcriptional regulator low > 153
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_20540 aromatic amino acid aminotransferase 0.30 AO353_03595 hypothetical protein low > 101
Ralstonia solanacearum GMI1000 0.46 RS_RS05000 aspartate/tyrosine/aromatic aminotransferase 0.32 RS_RS10990 YebC/PmpR family DNA-binding transcriptional regulator — —
Variovorax sp. SCN45 0.46 GFF944 Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.29 GFF303 Probable transcriptional regulatory protein YebC low > 127
Pseudomonas sp. RS175 0.46 PFR28_02838 Aromatic-amino-acid aminotransferase 0.31 PFR28_03415 Transcriptional regulatory protein PmpR low > 88
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_27 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.31 Pf1N1B4_640 FIG000859: hypothetical protein YebC — —
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_21330 aromatic amino acid aminotransferase 0.31 AO356_18010 hypothetical protein low > 104
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04974 aromatic-amino-acid transaminase 0.33 H281DRAFT_04522 DNA-binding regulatory protein, YebC/PmpR family — —
Dechlorosoma suillum PS 0.46 Dsui_2433 aspartate/tyrosine/aromatic aminotransferase 0.32 Dsui_0489 DNA-binding regulatory protein, YebC/PmpR family low > 51
Pseudomonas lactucae CFBP13502 0.46 GEMAOFIL_03965 Aromatic-amino-acid aminotransferase 0.29 GEMAOFIL_04644 Transcriptional regulatory protein PmpR low > 93
Variovorax sp. OAS795 0.46 ABID97_RS13990 amino acid aminotransferase 0.28 ABID97_RS16740 YebC/PmpR family DNA-binding transcriptional regulator low > 91
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS16490 amino acid aminotransferase 0.25 ABZR86_RS10850 YebC/PmpR family DNA-binding transcriptional regulator — —
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS09935 amino acid aminotransferase 0.33 ABZR87_RS15405 YebC/PmpR family DNA-binding transcriptional regulator low > 80
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_13195 Aminotransferase 0.26 OKGIIK_01830 tACO1 YebC/PmpR family DNA-binding transcriptional regulator low > 53
Pseudomonas aeruginosa PA14 0.45 IKLFDK_15990 Aspartate aminotransferase 0.28 IKLFDK_04360 YebC/PmpR family DNA-binding transcriptional regulator low > 100
Ralstonia solanacearum UW163 0.45 UW163_RS11685 aspartate/tyrosine/aromatic aminotransferase 0.32 UW163_RS10130 YebC/PmpR family DNA-binding transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS14220 aspartate/tyrosine/aromatic aminotransferase 0.32 RALBFv3_RS03540 YebC/PmpR family DNA-binding transcriptional regulator — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS10685 aspartate/tyrosine/aromatic aminotransferase 0.26 LRK54_RS04920 YebC/PmpR family DNA-binding transcriptional regulator low > 59
Rhodanobacter denitrificans MT42 0.45 LRK55_RS10325 amino acid aminotransferase 0.26 LRK55_RS04700 YebC/PmpR family DNA-binding transcriptional regulator low > 63
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS15835 aspartate aminotransferase 0.33 HSERO_RS17750 transcriptional regulator — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_1973 Aspartate transaminase 0.32 Psyr_1407 Protein of unknown function DUF28 low > 86
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_1973 Aspartate transaminase 0.32 Psyr_1407 Protein of unknown function DUF28 low > 86
Rhodanobacter sp000427505 FW510-R12 0.44 LRK53_RS03475 aspartate/tyrosine/aromatic aminotransferase 0.25 LRK53_RS05110 YebC/PmpR family DNA-binding transcriptional regulator low > 59
Acinetobacter radioresistens SK82 0.43 MPMX26_01473 Aromatic-amino-acid aminotransferase 0.28 MPMX26_01851 putative transcriptional regulatory protein YebC low > 36
Acinetobacter baumannii LAC-4 0.43 RR41_RS18495 aspartate/tyrosine/aromatic aminotransferase 0.28 RR41_RS11700 YebC/PmpR family DNA-binding transcriptional regulator — —

Not shown: 0 genomes with orthologs for CSW01_06530 only; 40 genomes with orthologs for CSW01_14085 only