| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_10570 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 1.0 | CSW01_13860 | | nitrogen regulation protein NR(II) | 0.47 | 19 |
| Rahnella sp. WP5 | 0.78 | EX31_RS19690 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.55 | EX31_RS15875 | | nitrogen regulation protein NR(II) | low | > 89 |
| Dickeya dadantii 3937 | 0.77 | DDA3937_RS14585 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.53 | DDA3937_RS00130 | | nitrogen regulation protein NR(II) | low | > 74 |
| Dickeya dianthicola 67-19 | 0.77 | HGI48_RS14535 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.52 | HGI48_RS21230 | | nitrogen regulation protein NR(II) | low | > 71 |
| Dickeya dianthicola ME23 | 0.77 | DZA65_RS15470 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.52 | DZA65_RS22205 | | nitrogen regulation protein NR(II) | low | > 75 |
| Serratia liquefaciens MT49 | 0.77 | IAI46_18030 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.55 | IAI46_24955 | | nitrogen regulation protein NR(II) | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.77 | HER17_RS06930 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.51 | HER17_RS21435 | | nitrogen regulation protein NR(II) | low | > 75 |
| Escherichia fergusonii Becca | 0.76 | EFB2_01528 | | 50S ribosomal protein L3 glutamine methyltransferase | 0.55 | EFB2_04747 | | Sensory histidine kinase/phosphatase NtrB | low | > 86 |
| Escherichia coli BW25113 | 0.76 | b2330 | yfcB | putative adenine-specific methylase (VIMSS) | 0.55 | b3869 | glnL | sensory histidine kinase in two-component regulatory system with GlnG (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.76 | OHPLBJKB_01375 | | 50S ribosomal protein L3 glutamine methyltransferase | 0.55 | OHPLBJKB_04183 | | Sensory histidine kinase/phosphatase NtrB | low | > 74 |
| Klebsiella pneumoniae MKP103 | 0.76 | KDGMDA_27275 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.54 | KDGMDA_09005 | | nitrogen regulation protein NR(II) | low | > 95 |
| Escherichia coli BL21 | 0.76 | ECD_02255 | | N5-glutamine methyltransferase | 0.55 | ECD_03754 | | sensory histidine kinase in two-component regulatory system with GlnG | low | > 61 |
| Pantoea sp. MT58 | 0.76 | IAI47_06145 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.54 | IAI47_00455 | | nitrogen regulation protein NR(II) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.76 | ECOLIN_RS13495 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.55 | ECOLIN_RS22300 | | nitrogen regulation protein NR(II) | low | > 55 |
| Klebsiella michiganensis M5al | 0.76 | BWI76_RS20440 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.54 | BWI76_RS00390 | | two-component system sensor histidine kinase NtrB | low | > 92 |
| Escherichia coli ECOR38 | 0.76 | HEPCGN_21815 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.55 | HEPCGN_12735 | glnL | nitrogen regulation protein NR(II) | low | > 88 |
| Enterobacter sp. TBS_079 | 0.76 | MPMX20_03265 | | 50S ribosomal protein L3 glutamine methyltransferase | 0.54 | MPMX20_04596 | | Sensory histidine kinase/phosphatase NtrB | 0.26 | 4 |
| Enterobacter asburiae PDN3 | 0.76 | EX28DRAFT_0274 | | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | 0.54 | EX28DRAFT_4351 | | Signal transduction histidine kinase, nitrogen specific | low | > 76 |
| Escherichia coli ECRC62 | 0.76 | BNILDI_13165 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.55 | BNILDI_05295 | glnL | nitrogen regulation protein NR(II) | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.76 | GFF1951 | | Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p | 0.55 | GFF2221 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 78 |
| Escherichia coli ECRC102 | 0.76 | NIAGMN_20385 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.55 | NIAGMN_11860 | glnL | nitrogen regulation protein NR(II) | low | > 80 |
| Pantoea agglomerans CFBP13505 P0401 | 0.76 | PagCFBP13505_RS00100 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.54 | PagCFBP13505_RS18890 | | nitrogen regulation protein NR(II) | low | > 74 |
| Escherichia coli ECRC100 | 0.76 | OKFHMN_22610 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.55 | OKFHMN_14105 | glnL | nitrogen regulation protein NR(II) | low | > 79 |
| Escherichia coli ECRC101 | 0.76 | MCAODC_13650 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.55 | MCAODC_04605 | glnL | nitrogen regulation protein NR(II) | low | > 88 |
| Escherichia coli ECRC98 | 0.76 | JDDGAC_26570 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.55 | JDDGAC_17730 | glnL | nitrogen regulation protein NR(II) | low | > 87 |
| Escherichia coli ECOR27 | 0.76 | NOLOHH_14245 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.55 | NOLOHH_06235 | glnL | nitrogen regulation protein NR(II) | low | > 76 |
| Escherichia coli ECRC99 | 0.76 | KEDOAH_05585 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.55 | KEDOAH_14045 | glnL | nitrogen regulation protein NR(II) | — | — |
| Erwinia tracheiphila HP pepo 2.2 | 0.76 | IJEDHG_17820 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.54 | IJEDHG_08290 | glnL | nitrogen regulation protein NR(II) | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.75 | LU632_RS07770 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.54 | LU632_RS22140 | glnL | nitrogen regulation protein NR(II) | 0.83 | 1 |
| Erwinia amylovora T8 | 0.74 | OLJFJH_11150 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.54 | OLJFJH_05500 | | nitrogen regulation protein NR(II) | low | > 58 |
| Shewanella amazonensis SB2B | 0.65 | Sama_2160 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) | 0.44 | Sama_3426 | | nitrogen regulation protein (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.65 | Shew_2417 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) | 0.44 | Shew_3560 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.64 | Shewana3_1468 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) | 0.47 | Shewana3_0259 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.62 | SO3080 | | hemK family protein (NCBI ptt file) | 0.47 | SO4471 | ntrB | nitrogen regulation protein (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.58 | MIT1002_01228 | | 50S ribosomal protein L3 glutamine methyltransferase | 0.43 | MIT1002_03185 | | Nitrogen regulation protein NR(II) | low | > 70 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_03129 | | 50S ribosomal protein L3 glutamine methyltransferase | 0.45 | PFR28_04945 | | Sensory histidine kinase/phosphatase NtrB | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.56 | AO356_19525 | | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | 0.45 | AO356_09725 | | histidine kinase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.56 | Pf6N2E2_5819 | | Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p | 0.45 | Pf6N2E2_3825 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_3777 | | Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p | 0.45 | Pf1N1B4_1610 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 87 |
| Pseudomonas putida KT2440 | 0.56 | PP_1827 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | 0.44 | PP_5047 | | two-component system sensory histidine kinase/phosphatase GlnL/GlnG | low | > 96 |
| Pseudomonas sp. S08-1 | 0.55 | OH686_00665 | | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | 0.44 | OH686_10635 | | Nitrogen regulation protein NtrB | low | > 80 |
| Pseudomonas sp. BP01 | 0.55 | JOY50_RS15810 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.45 | JOY50_RS09455 | glnL | nitrogen regulation protein NR(II) | low | > 84 |
| Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_02265 | | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | 0.44 | AO353_12150 | | histidine kinase | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_4168 | | Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p | 0.44 | PfGW456L13_346 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.55 | Psyr_1850 | | [LSU ribosomal protein L3P]-glutamine N5-methyltransferase | 0.45 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | low | > 86 |
| Pseudomonas sp. DMC3 | 0.55 | GFF2628 | | 50S ribosomal protein L3 glutamine methyltransferase | 0.45 | GFF4080 | | Sensory histidine kinase/phosphatase NtrB | low | > 89 |
| Pseudomonas syringae pv. syringae B728a | 0.55 | Psyr_1850 | | [LSU ribosomal protein L3P]-glutamine N5-methyltransferase | 0.45 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | low | > 86 |
| Pseudomonas aeruginosa PA14 | 0.55 | IKLFDK_08085 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.44 | IKLFDK_27900 | | two-component system sensor histidine kinase NtrB | low | > 100 |
| Pseudomonas lactucae CFBP13502 | 0.55 | GEMAOFIL_04068 | | 50S ribosomal protein L3 glutamine methyltransferase | 0.44 | GEMAOFIL_00548 | | Sensory histidine kinase/phosphatase NtrB | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.55 | PFLU_RS21295 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.44 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | low | > 109 |
| Pseudomonas segetis P6 | 0.55 | MPMX49_02188 | | 50S ribosomal protein L3 glutamine methyltransferase | 0.44 | MPMX49_04286 | | Sensory histidine kinase/phosphatase NtrB | low | > 75 |
| Pseudomonas fluorescens SBW25-INTG | 0.55 | PFLU_RS21295 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.44 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | low | > 109 |
| Pseudomonas stutzeri RCH2 | 0.54 | Psest_1995 | | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | 0.43 | Psest_3931 | | Signal transduction histidine kinase, nitrogen specific | low | > 67 |
| Pseudomonas sp. SVBP6 | 0.54 | COO64_RS06255 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.44 | COO64_RS13330 | glnL | nitrogen regulation protein NR(II) | low | > 93 |
| Pseudomonas simiae WCS417 | 0.54 | PS417_19330 | | SAM-dependent methyltransferase | 0.45 | PS417_01640 | | histidine kinase | — | — |
| Marinobacter adhaerens HP15 | 0.54 | HP15_1839 | | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | 0.43 | HP15_426 | | signal transduction histidine kinase, nitrogen specific, NtrB | low | > 73 |
| Kangiella aquimarina DSM 16071 | 0.50 | B158DRAFT_1297 | | [LSU ribosomal protein L3P]-glutamine N5-methyltransferase (EC 2.1.1.-) | 0.26 | B158DRAFT_0715 | | Signal transduction histidine kinase, nitrogen specific | low | > 40 |
| Acinetobacter radioresistens SK82 | 0.46 | MPMX26_01339 | | 50S ribosomal protein L3 glutamine methyltransferase | 0.34 | MPMX26_01293 | | Sensory histidine kinase/phosphatase NtrB | low | > 36 |
| Dechlorosoma suillum PS | 0.45 | Dsui_2712 | | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | 0.40 | Dsui_1050 | | signal transduction histidine kinase, nitrogen specific | low | > 51 |
| Azospirillum brasilense Sp245 | 0.45 | AZOBR_RS10950 | | SAM-dependent methyltransferase | 0.23 | AZOBR_RS14425 | | ATPase | low | > 97 |
| Acinetobacter baumannii LAC-4 | 0.44 | RR41_RS12710 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.34 | RR41_RS08035 | | PAS domain-containing protein | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.44 | LRK53_RS08300 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.24 | LRK53_RS00565 | | ATP-binding protein | low | > 59 |
| Castellaniella sp019104865 MT123 | 0.44 | ABCV34_RS05175 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.30 | ABCV34_RS03535 | | nitrogen regulation protein NR(II) | low | > 48 |
| Methylophilus sp. DMC18 | 0.44 | GFF893 | | 50S ribosomal protein L3 glutamine methyltransferase | 0.37 | GFF2023 | | Sensory histidine kinase/phosphatase NtrB | low | > 43 |
| Azospirillum sp. SherDot2 | 0.44 | MPMX19_00751 | | 50S ribosomal protein L3 glutamine methyltransferase | 0.23 | MPMX19_01111 | | Sensory histidine kinase/phosphatase NtrB | low | > 112 |
| Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_04795 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.22 | OKGIIK_14470 | | PAS domain-containing sensor histidine kinase | low | > 53 |
| Rhodanobacter denitrificans MT42 | 0.44 | LRK55_RS01515 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.21 | LRK55_RS07735 | | ATP-binding protein | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS01735 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.21 | LRK54_RS07985 | | ATP-binding protein | low | > 59 |
| Paraburkholderia sabiae LMG 24235 | 0.42 | QEN71_RS06350 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.31 | QEN71_RS05670 | | nitrogen regulation protein NR(II) | low | > 153 |
| Ralstonia solanacearum GMI1000 | 0.42 | RS_RS06960 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.32 | RS_RS06315 | | PAS domain-containing sensor histidine kinase | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.42 | ABIE53_002520 | | ribosomal protein L3 glutamine methyltransferase | 0.31 | ABIE53_002805 | | two-component system nitrogen regulation sensor histidine kinase GlnL | low | > 113 |
| Ralstonia solanacearum PSI07 | 0.42 | RPSI07_RS17185 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.31 | RPSI07_RS17820 | | PAS domain-containing sensor histidine kinase | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.42 | RALBFv3_RS00290 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.31 | RALBFv3_RS15535 | | PAS domain-containing sensor histidine kinase | — | — |
| Ralstonia solanacearum UW163 | 0.42 | UW163_RS13620 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.31 | UW163_RS12995 | | PAS domain-containing sensor histidine kinase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.41 | ABZR87_RS11740 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.30 | ABZR87_RS11065 | | nitrogen regulation protein NR(II) | low | > 80 |
| Herbaspirillum seropedicae SmR1 | 0.41 | HSERO_RS10785 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | 0.36 | HSERO_RS15685 | | histidine kinase | low | > 78 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.39 | H281DRAFT_00596 | | [LSU ribosomal protein L3P]-glutamine N5-methyltransferase | 0.31 | H281DRAFT_00453 | | two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.39 | BPHYT_RS12205 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | 0.31 | BPHYT_RS12940 | | signal transduction histidine kinase | low | > 109 |
| Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS11955 | | SAM-dependent methyltransferase | 0.33 | RR42_RS12985 | | histidine kinase | low | > 128 |
| Rhodopseudomonas palustris CGA009 | 0.38 | TX73_005990 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | 0.24 | TX73_013415 | | nitrogen regulation protein NR(II) | low | > 86 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.33 | GFF4549 | | Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p | 0.30 | GFF5270 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 90 |
Not shown: 6 genomes with orthologs for CSW01_10570 only; 11 genomes with orthologs for CSW01_13860 only