Conservation of cofitness between CSW01_03755 and CSW01_11200 in Vibrio cholerae E7946 ATCC 55056

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03755 recombination-associated protein RdgC 1.0 CSW01_11200 flagellar basal-body rod protein FlgG 0.79 8
Dickeya dianthicola 67-19 0.59 HGI48_RS05465 recombination-associated protein RdgC 0.53 HGI48_RS13500 flagellar basal-body rod protein FlgG — —
Dickeya dianthicola ME23 0.59 DZA65_RS05790 recombination-associated protein RdgC 0.53 DZA65_RS13985 flagellar basal-body rod protein FlgG 0.73 24
Dickeya dadantii 3937 0.58 DDA3937_RS05405 recombination-associated protein RdgC 0.54 DDA3937_RS13455 flagellar basal-body rod protein FlgG 0.57 42
Erwinia amylovora T8 0.58 OLJFJH_18235 recombination-associated protein RdgC 0.54 OLJFJH_10070 flagellar basal-body rod protein FlgG low > 58
Rahnella sp. WP5 0.58 EX31_RS21990 recombination-associated protein RdgC 0.55 EX31_RS11290 flagellar basal-body rod protein FlgG 0.35 3
Pantoea sp. MT58 0.58 IAI47_14910 recombination-associated protein RdgC 0.51 IAI47_12140 flagellar basal-body rod protein FlgG 0.41 13
Serratia liquefaciens MT49 0.58 IAI46_04710 recombination-associated protein RdgC 0.57 IAI46_15935 flagellar basal-body rod protein FlgG low > 86
Escherichia coli ECRC62 0.57 BNILDI_22915 rdgC recombination-associated protein RdgC 0.55 BNILDI_19340 flgG flagellar basal-body rod protein FlgG low > 75
Escherichia fergusonii Becca 0.57 EFB2_03663 Recombination-associated protein RdgC 0.55 EFB2_02896 Flagellar basal-body rod protein FlgG low > 86
Escherichia coli Nissle 1917 0.57 ECOLIN_RS02385 recombination-associated protein RdgC 0.55 ECOLIN_RS06240 flagellar basal-body rod protein FlgG — —
Escherichia coli ECOR38 0.57 HEPCGN_07210 rdgC recombination-associated protein RdgC 0.55 HEPCGN_23840 flgG flagellar basal-body rod protein FlgG low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_03282 Recombination-associated protein RdgC 0.55 OHPLBJKB_02587 Flagellar basal-body rod protein FlgG low > 73
Escherichia coli ECOR27 0.57 NOLOHH_01500 rdgC recombination-associated protein RdgC 0.55 NOLOHH_21180 flgG flagellar basal-body rod protein FlgG low > 75
Escherichia coli BW25113 0.57 b0393 rdgC recombination associated protein (NCBI) 0.55 b1078 flgG flagellar component of cell-distal portion of basal-body rod (NCBI) low > 76
Escherichia coli BL21 0.57 ECD_00342 nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function 0.55 ECD_01074 flagellar component of cell-distal portion of basal-body rod low > 61
Escherichia coli ECRC100 0.57 OKFHMN_08570 rdgC recombination-associated protein RdgC 0.55 OKFHMN_03650 flgG flagellar basal-body rod protein FlgG low > 80
Erwinia tracheiphila SCR3 0.57 LU632_RS18955 rdgC recombination-associated protein RdgC 0.54 LU632_RS10420 flgG flagellar basal-body rod protein FlgG low > 74
Escherichia coli ECRC102 0.57 NIAGMN_06625 rdgC recombination-associated protein RdgC 0.55 NIAGMN_24180 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli ECRC98 0.57 JDDGAC_12225 rdgC recombination-associated protein RdgC 0.55 JDDGAC_07310 flgG flagellar basal-body rod protein FlgG low > 86
Escherichia coli ECRC99 0.57 KEDOAH_19395 rdgC recombination-associated protein RdgC 0.55 KEDOAH_24105 flgG flagellar basal-body rod protein FlgG — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF4290 DNA recombination-dependent growth factor C 0.56 GFF3359 Flagellar basal-body rod protein FlgG low > 78
Escherichia coli ECRC101 0.57 MCAODC_27795 rdgC recombination-associated protein RdgC 0.55 MCAODC_23010 flgG flagellar basal-body rod protein FlgG low > 87
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2579 DNA recombination-dependent growth factor C 0.55 EX28DRAFT_1854 flagellar basal-body rod protein FlgG, Gram-negative bacteria low > 76
Enterobacter sp. TBS_079 0.56 MPMX20_00982 Recombination-associated protein RdgC 0.55 MPMX20_01757 Flagellar basal-body rod protein FlgG low > 85
Pectobacterium carotovorum WPP14 0.55 HER17_RS16060 recombination-associated protein RdgC 0.55 HER17_RS08190 flagellar basal-body rod protein FlgG low > 75
Shewanella amazonensis SB2B 0.49 Sama_1072 rdgC recombination associated protein (RefSeq) 0.71 Sama_2313 flgG flagellar basal body rod protein FlgG (RefSeq) low > 62
Shewanella sp. ANA-3 0.49 Shewana3_2881 rdgC recombination associated protein (RefSeq) 0.72 Shewana3_1326 flgG flagellar basal body rod protein FlgG (RefSeq) low > 73
Shewanella oneidensis MR-1 0.49 SO1556 conserved hypothetical protein (NCBI ptt file) 0.71 SO3244 flgG flagellar basal-body rod protein FlgG (NCBI ptt file) 0.40 43
Shewanella loihica PV-4 0.48 Shew_2751 rdgC recombination associated protein (RefSeq) 0.72 Shew_1350 flgG flagellar basal body rod protein FlgG (RefSeq) low > 60
Pseudomonas aeruginosa PA14 0.44 IKLFDK_16705 recombination-associated protein RdgC 0.59 IKLFDK_04970 flagellar basal-body rod protein FlgG low > 101
Pseudomonas putida KT2440 0.43 PP_1702 Recombination-associated protein RdgC 0.59 PP_4385 flagellar basal-body rod protein FlgG low > 96
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_1588 Putative exonuclease, RdgC 0.57 Psyr_3475 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_1588 Putative exonuclease, RdgC 0.57 Psyr_3475 Flagellar basal body rod protein:Protein of unknown function DUF1078 — —
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_19265 recombination-associated protein RdgC 0.59 AO356_03925 flagellar basal-body rod protein FlgG 0.39 43
Pseudomonas sp. BP01 0.43 JOY50_RS28065 rdgC recombination-associated protein RdgC 0.59 JOY50_RS00765 flgG flagellar basal-body rod protein FlgG low > 84
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_5768 DNA recombination-dependent growth factor C 0.59 Pf6N2E2_2627 Flagellar basal-body rod protein FlgG 0.24 58
Pseudomonas sp. S08-1 0.42 OH686_19640 DNA recombination-dependent growth factor RdgC 0.59 OH686_02950 flagellar basal-body rod protein FlgG low > 80
Pseudomonas sp. RS175 0.42 PFR28_03182 Recombination-associated protein RdgC 0.59 PFR28_00805 Flagellar basal-body rod protein FlgG low > 88
Pseudomonas sp. SVBP6 0.42 COO64_RS07115 rdgC recombination-associated protein RdgC 0.58 COO64_RS21370 flgG flagellar basal-body rod protein FlgG low > 93
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_02515 recombination-associated protein RdgC 0.58 AO353_18600 flagellar basal-body rod protein FlgG low > 101
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_3731 DNA recombination-dependent growth factor C 0.59 Pf1N1B4_3569 Flagellar basal-body rod protein FlgG — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_4216 DNA recombination-dependent growth factor C 0.59 PfGW456L13_4386 Flagellar basal-body rod protein FlgG low > 87
Pseudomonas sp. DMC3 0.41 GFF2574 Recombination-associated protein RdgC 0.59 GFF2417 Flagellar basal-body rod protein FlgG low > 89
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS09255 recombination-associated protein RdgC 0.59 PFLU_RS21855 flagellar basal-body rod protein FlgG low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS09255 recombination-associated protein RdgC 0.59 PFLU_RS21855 flagellar basal-body rod protein FlgG low > 109
Marinobacter adhaerens HP15 0.40 HP15_1221 recombination-associated protein rdgC 0.56 HP15_1472 flagellar basal-body rod protein FlgG low > 73
Pseudomonas simiae WCS417 0.40 PS417_09245 recombinase RdgC 0.59 PS417_19885 flagellar basal body rod protein FlgG low > 88
Pseudomonas stutzeri RCH2 0.40 Psest_1532 DNA recombination-dependent growth factor C 0.59 Psest_2963 flagellar basal-body rod protein FlgG, Gram-negative bacteria low > 67
Alteromonas macleodii MIT1002 0.37 MIT1002_00749 Recombination-associated protein RdgC 0.65 MIT1002_01046 Distal rod protein low > 70
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS21640 recombinase RdgC 0.55 HSERO_RS10205 flagellar basal body rod protein FlgG 0.31 51
Castellaniella sp019104865 MT123 0.33 ABCV34_RS04480 recombination-associated protein RdgC 0.50 ABCV34_RS05745 flagellar basal-body rod protein FlgG — —
Lysobacter sp. OAE881 0.31 ABIE51_RS01300 recombination-associated protein RdgC 0.54 ABIE51_RS16695 flagellar basal-body rod protein FlgG — —
Dechlorosoma suillum PS 0.31 Dsui_2147 DNA recombination-dependent growth factor C 0.56 Dsui_1737 flagellar basal-body rod protein FlgG — —
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS16505 recombination-associated protein RdgC 0.58 ABZR86_RS20100 flagellar basal-body rod protein FlgG — —
Ralstonia solanacearum UW163 0.30 UW163_RS01150 recombination-associated protein RdgC 0.54 UW163_RS17470 flagellar basal-body rod protein FlgG — —
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS12420 recombination-associated protein RdgC 0.54 RALBFv3_RS21715 flagellar basal-body rod protein FlgG low > 76
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS10690 recombination-associated protein RdgC 0.57 LRK54_RS13430 flagellar basal-body rod protein FlgG — —
Rhodanobacter denitrificans MT42 0.30 LRK55_RS10330 recombination-associated protein RdgC 0.57 LRK55_RS13170 flagellar basal-body rod protein FlgG — —
Rhodanobacter sp000427505 FW510-R12 0.30 LRK53_RS03480 recombination-associated protein RdgC 0.57 LRK53_RS15150 flagellar basal-body rod protein FlgG — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.5210.1 DNA recombination-dependent growth factor C 0.54 Xcc-8004.2784.1 Flagellar basal-body rod protein FlgG — —
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS18475 recombination-associated protein RdgC 0.53 ABZR87_RS22265 flagellar basal-body rod protein FlgG low > 80
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS20685 recombination-associated protein RdgC 0.51 QEN71_RS28895 flagellar basal-body rod protein FlgG low > 153
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_00319 recombination associated protein RdgC 0.51 H281DRAFT_05767 flagellar basal-body rod protein FlgG low > 103
Paraburkholderia graminis OAS925 0.29 ABIE53_001446 recombination associated protein RdgC 0.52 ABIE53_000096 flagellar basal-body rod protein FlgG low > 113
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_13190 rdgC recombination-associated protein RdgC 0.57 OKGIIK_02675 flgG flagellar basal-body rod protein FlgG — —
Ralstonia solanacearum GMI1000 0.29 RS_RS03100 recombination-associated protein RdgC 0.54 RS_RS18820 flagellar basal-body rod protein FlgG low > 80
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS06215 recombinase RdgC 0.52 BPHYT_RS18870 flagellar basal body rod protein FlgG low > 109
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS17820 recombinase RdgC 0.52 RR42_RS35700 flagellar basal body rod protein FlgG low > 128
Ralstonia solanacearum PSI07 0.28 RPSI07_RS20910 recombination-associated protein RdgC 0.54 RPSI07_RS01415 flagellar basal-body rod protein FlgG low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF5355 DNA recombination-dependent growth factor C 0.50 GFF4077 Flagellar basal-body rod protein FlgG — —
Variovorax sp. SCN45 0.24 GFF5080 DNA recombination-dependent growth factor RdgC 0.52 GFF5720 Flagellar basal-body rod protein FlgG low > 127

Not shown: 2 genomes with orthologs for CSW01_03755 only; 20 genomes with orthologs for CSW01_11200 only