Conservation of cofitness between CSW01_03755 and CSW01_11190 in Vibrio cholerae E7946 ATCC 55056

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03755 recombination-associated protein RdgC 1.0 CSW01_11190 flagellar P-ring protein 0.78 18
Dickeya dianthicola 67-19 0.59 HGI48_RS05465 recombination-associated protein RdgC 0.42 HGI48_RS13490 flagellar basal body P-ring protein FlgI — —
Dickeya dianthicola ME23 0.59 DZA65_RS05790 recombination-associated protein RdgC 0.42 DZA65_RS13975 flagellar basal body P-ring protein FlgI 0.74 3
Dickeya dadantii 3937 0.58 DDA3937_RS05405 recombination-associated protein RdgC 0.43 DDA3937_RS13445 flagellar basal body P-ring protein FlgI low > 74
Erwinia amylovora T8 0.58 OLJFJH_18235 recombination-associated protein RdgC 0.44 OLJFJH_10080 flagellar biosynthesis protein FlgA low > 58
Rahnella sp. WP5 0.58 EX31_RS21990 recombination-associated protein RdgC 0.39 EX31_RS11280 flagellar basal body P-ring protein FlgI low > 89
Serratia liquefaciens MT49 0.58 IAI46_04710 recombination-associated protein RdgC 0.43 IAI46_15925 flagellar basal body P-ring protein FlgI low > 87
Pantoea sp. MT58 0.58 IAI47_14910 recombination-associated protein RdgC 0.37 IAI47_12130 flagellar basal body P-ring protein FlgI 0.38 29
Pantoea agglomerans CFBP13505 P0401 0.57 PagCFBP13516_RS15190 rdgC recombination-associated protein RdgC 0.37 PagCFBP13516_RS12190 flagellar basal body P-ring protein FlgI low > 80
Erwinia tracheiphila HP pepo 2.2 0.57 IJEDHG_26160 rdgC recombination-associated protein RdgC 0.43 IJEDHG_21080 flgI flagellar biosynthesis protein FlgA low > 61
Escherichia coli Nissle 1917 0.57 ECOLIN_RS02385 recombination-associated protein RdgC 0.43 ECOLIN_RS06250 flagellar basal body P-ring protein FlgI — —
Escherichia coli BL21 0.57 ECD_00342 nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function 0.43 ECD_01076 putative flagellar basal body protein low > 61
Escherichia fergusonii Becca 0.57 EFB2_03663 Recombination-associated protein RdgC 0.43 EFB2_02894 Flagellar P-ring protein low > 86
Escherichia coli ECRC62 0.57 BNILDI_22915 rdgC recombination-associated protein RdgC 0.43 BNILDI_19330 flgI flagellar basal body P-ring protein FlgI low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_03282 Recombination-associated protein RdgC 0.43 OHPLBJKB_02585 Flagellar P-ring protein low > 74
Escherichia coli ECOR27 0.57 NOLOHH_01500 rdgC recombination-associated protein RdgC 0.43 NOLOHH_21170 flgI flagellar basal body P-ring protein FlgI low > 75
Escherichia coli BW25113 0.57 b0393 rdgC recombination associated protein (NCBI) 0.43 b1080 flgI homolog of Salmonella P-ring of flagella basal body (VIMSS) low > 76
Escherichia coli ECRC102 0.57 NIAGMN_06625 rdgC recombination-associated protein RdgC 0.43 NIAGMN_24190 flgI flagellar basal body P-ring protein FlgI — —
Escherichia coli ECRC100 0.57 OKFHMN_08570 rdgC recombination-associated protein RdgC 0.43 OKFHMN_03640 flgI flagellar basal body P-ring protein FlgI — —
Escherichia coli ECRC99 0.57 KEDOAH_19395 rdgC recombination-associated protein RdgC 0.43 KEDOAH_24115 flgI flagellar basal body P-ring protein FlgI — —
Escherichia coli ECRC98 0.57 JDDGAC_12225 rdgC recombination-associated protein RdgC 0.43 JDDGAC_07300 flgI flagellar basal body P-ring protein FlgI low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF4290 DNA recombination-dependent growth factor C 0.43 GFF3361 Flagellar P-ring protein FlgI low > 78
Escherichia coli ECRC101 0.57 MCAODC_27795 rdgC recombination-associated protein RdgC 0.43 MCAODC_23000 flgI flagellar basal body P-ring protein FlgI low > 87
Erwinia tracheiphila SCR3 0.57 LU632_RS18955 rdgC recombination-associated protein RdgC 0.43 LU632_RS10430 flagellar basal body P-ring protein FlgI low > 73
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2579 DNA recombination-dependent growth factor C 0.43 EX28DRAFT_1852 Flagellar basal-body P-ring protein low > 76
Enterobacter sp. TBS_079 0.56 MPMX20_00982 Recombination-associated protein RdgC 0.43 MPMX20_01759 Flagellar P-ring protein low > 85
Pectobacterium carotovorum WPP14 0.55 HER17_RS16060 recombination-associated protein RdgC 0.42 HER17_RS08200 flagellar basal body P-ring protein FlgI low > 75
Shewanella amazonensis SB2B 0.49 Sama_1072 rdgC recombination associated protein (RefSeq) 0.66 Sama_2311 flgI flagellar basal body P-ring protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.49 Shewana3_2881 rdgC recombination associated protein (RefSeq) 0.67 Shewana3_1328 flgI flagellar basal body P-ring protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.49 SO1556 conserved hypothetical protein (NCBI ptt file) 0.67 SO3242 flgI flagellar P-ring protein FlgI (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.48 Shew_2751 rdgC recombination associated protein (RefSeq) 0.66 Shew_1352 flgI flagellar basal body P-ring protein (RefSeq) 0.47 43
Pseudomonas aeruginosa PA14 0.44 IKLFDK_16705 recombination-associated protein RdgC 0.57 IKLFDK_04980 flagellar P-ring protein precursor FlgI low > 98
Pseudomonas aeruginosa MRSN321 0.44 PFGADD_01700 rdgC recombination-associated protein RdgC 0.57 PFGADD_04046 flgI flagellar P-ring protein precursor FlgI low > 99
Pseudomonas aeruginosa PUPa3 0.44 NPBIFN_01736 rdgC recombination-associated protein RdgC 0.57 NPBIFN_04105 flgI flagellar P-ring protein precursor FlgI low > 101
Pseudomonas putida KT2440 0.43 PP_1702 Recombination-associated protein RdgC 0.58 PP_4383 Flagellar P-ring protein low > 96
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_1588 Putative exonuclease, RdgC 0.58 Psyr_3473 Flagellar P-ring protein low > 86
Pseudomonas sp. BP01 0.43 JOY50_RS28065 rdgC recombination-associated protein RdgC 0.58 JOY50_RS00755 flagellar basal body P-ring protein FlgI low > 84
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_1588 Putative exonuclease, RdgC 0.58 Psyr_3473 Flagellar P-ring protein low > 86
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_19265 recombination-associated protein RdgC 0.58 AO356_03915 flagellar biosynthesis protein FlgI 0.39 45
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_5768 DNA recombination-dependent growth factor C 0.58 Pf6N2E2_2625 Flagellar P-ring protein FlgI 0.27 31
Pseudomonas sp. S08-1 0.42 OH686_19640 DNA recombination-dependent growth factor RdgC 0.57 OH686_02940 Flagellar P-ring protein FlgI low > 80
Pseudomonas sp. RS175 0.42 PFR28_03182 Recombination-associated protein RdgC 0.58 PFR28_00807 Flagellar P-ring protein low > 88
Pseudomonas sp. SVBP6 0.42 COO64_RS07115 rdgC recombination-associated protein RdgC 0.58 COO64_RS21360 flagellar basal body P-ring protein FlgI low > 91
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_02515 recombination-associated protein RdgC 0.58 AO353_18610 flagellar biosynthesis protein FlgI low > 101
Pseudomonas protegens RBAN4 0.41 FABNJH_22770 rdgC recombination-associated protein RdgC 0.58 FABNJH_08400 flgI Flagellar P-ring protein — —
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_3731 DNA recombination-dependent growth factor C 0.58 Pf1N1B4_3571 Flagellar P-ring protein FlgI — —
Pseudomonas segetis P6 0.41 ACVTMO_RS08610 rdgC recombination-associated protein RdgC 0.60 ACVTMO_RS15655 flagellar basal body P-ring protein FlgI low > 75
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_4216 DNA recombination-dependent growth factor C 0.58 PfGW456L13_4384 Flagellar P-ring protein FlgI low > 87
Pseudomonas sp. DMC3 0.41 GFF2574 Recombination-associated protein RdgC 0.59 GFF2419 Flagellar P-ring protein low > 89
Pseudomonas fluorescens SBW25 0.40 PFLU_RS09255 recombination-associated protein RdgC 0.58 PFLU_RS21845 flagellar basal body P-ring protein FlgI low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS09255 recombination-associated protein RdgC 0.58 PFLU_RS21845 flagellar basal body P-ring protein FlgI low > 109
Marinobacter adhaerens HP15 0.40 HP15_1221 recombination-associated protein rdgC 0.61 HP15_1474 flagellar P-ring protein precursor I low > 73
Pseudomonas lactucae CFBP13502 0.40 GEMAOFIL_01972 Recombination-associated protein RdgC 0.58 GEMAOFIL_04173 Flagellar P-ring protein low > 96
Pseudomonas orientalis W4I3 0.40 QF045_RS11910 recombination-associated protein RdgC 0.58 QF045_RS22005 flagellar basal body P-ring protein FlgI low > 93
Pseudomonas simiae WCS417 0.40 PS417_09245 recombinase RdgC 0.58 PS417_19875 flagellar P-ring protein FlgI — —
Pseudomonas sp. FW215-L2 0.40 GFF5860 Recombination-associated protein RdgC 0.57 GFF1926 Flagellar P-ring protein low > 111
Pseudomonas stutzeri RCH2 0.40 Psest_1532 DNA recombination-dependent growth factor C 0.55 Psest_2961 Flagellar basal-body P-ring protein low > 67
Alteromonas macleodii MIT1002 0.37 MIT1002_00749 Recombination-associated protein RdgC 0.65 MIT1002_01048 Basal body P-ring protein low > 70
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS21640 recombinase RdgC 0.46 HSERO_RS10215 flagellar P-ring protein FlgI low > 78
Castellaniella sp019104865 MT123 0.33 ABCV34_RS04480 recombination-associated protein RdgC 0.42 ABCV34_RS05735 flagellar basal body P-ring protein FlgI — —
Dechlorosoma suillum PS 0.31 Dsui_2147 DNA recombination-dependent growth factor C 0.46 Dsui_1739 flagellar basal-body P-ring protein — —
Lysobacter sp. OAE881 0.31 ABIE51_RS01300 recombination-associated protein RdgC 0.52 ABIE51_RS16705 flagellar basal body P-ring protein FlgI — —
Collimonas humicola GW821-FHT01A05 0.31 MPMX01_04942 Recombination-associated protein RdgC 0.34 MPMX01_02350 Flagellar P-ring protein low > 87
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS16505 recombination-associated protein RdgC 0.49 ABZR86_RS20110 flagellar basal body P-ring protein FlgI — —
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS12420 recombination-associated protein RdgC 0.46 RALBFv3_RS21705 flagellar basal body P-ring protein FlgI low > 76
Ralstonia solanacearum UW163 0.30 UW163_RS01150 recombination-associated protein RdgC 0.46 UW163_RS17480 flagellar basal body P-ring protein FlgI — —
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS10690 recombination-associated protein RdgC 0.50 LRK54_RS13440 flagellar basal body P-ring protein FlgI — —
Rhodanobacter denitrificans MT42 0.30 LRK55_RS10330 recombination-associated protein RdgC 0.50 LRK55_RS13180 flagellar basal body P-ring protein FlgI — —
Rhodanobacter sp000427505 FW510-R12 0.30 LRK53_RS03480 recombination-associated protein RdgC 0.52 LRK53_RS15140 flagellar basal body P-ring protein FlgI — —
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS18475 recombination-associated protein RdgC 0.45 ABZR87_RS22255 flagellar basal body P-ring protein FlgI low > 80
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.5210.1 DNA recombination-dependent growth factor C 0.53 Xcc-8004.2786.1 Flagellar P-ring protein FlgI — —
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS20685 recombination-associated protein RdgC 0.40 QEN71_RS28885 flagellar basal body P-ring protein FlgI low > 153
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_00319 recombination associated protein RdgC 0.40 H281DRAFT_05769 flagellar P-ring protein precursor FlgI low > 103
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_13190 rdgC recombination-associated protein RdgC 0.50 OKGIIK_02685 flgI Flagellar basal body P-ring protein FlgI — —
Paraburkholderia graminis OAS925 0.29 ABIE53_001446 recombination associated protein RdgC 0.40 ABIE53_000094 flagellar P-ring protein precursor FlgI low > 113
Ralstonia solanacearum GMI1000 0.29 RS_RS03100 recombination-associated protein RdgC 0.45 RS_RS18830 flagellar P-ring protein FlgI low > 80
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS06215 recombinase RdgC 0.40 BPHYT_RS18860 flagellar P-ring protein FlgI low > 109
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS17820 recombinase RdgC 0.42 RR42_RS35690 flagellar P-ring protein FlgI low > 128
Ralstonia solanacearum PSI07 0.28 RPSI07_RS20910 recombination-associated protein RdgC 0.44 RPSI07_RS01425 flagellar basal body P-ring protein FlgI low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF5355 DNA recombination-dependent growth factor C 0.46 GFF1408 Flagellar P-ring protein FlgI — —

Not shown: 5 genomes with orthologs for CSW01_03755 only; 21 genomes with orthologs for CSW01_11190 only