Conservation of cofitness between CSW01_01500 and CSW01_09465 in Vibrio cholerae E7946 ATCC 55056

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01500 50S ribosomal protein L11 methyltransferase 1.0 CSW01_09465 NAD(P)/FAD-dependent oxidoreductase 0.57 16
Dickeya dadantii 3937 0.74 DDA3937_RS01380 50S ribosomal protein L11 methyltransferase 0.71 DDA3937_RS13040 NAD(P)/FAD-dependent oxidoreductase low > 74
Pectobacterium carotovorum WPP14 0.74 HER17_RS20225 50S ribosomal protein L11 methyltransferase 0.70 HER17_RS08735 NAD(P)/FAD-dependent oxidoreductase low > 75
Dickeya dianthicola 67-19 0.74 HGI48_RS01300 50S ribosomal protein L11 methyltransferase 0.70 HGI48_RS13105 NAD(P)/FAD-dependent oxidoreductase low > 71
Dickeya dianthicola ME23 0.74 DZA65_RS01360 50S ribosomal protein L11 methyltransferase 0.69 DZA65_RS13575 NAD(P)/FAD-dependent oxidoreductase low > 75
Rahnella sp. WP5 0.73 EX31_RS12190 50S ribosomal protein L11 methyltransferase 0.72 EX31_RS24510 NAD(P)/FAD-dependent oxidoreductase low > 89
Pantoea sp. MT58 0.72 IAI47_02390 50S ribosomal protein L11 methyltransferase 0.71 IAI47_11985 NAD(P)/FAD-dependent oxidoreductase low > 76
Serratia liquefaciens MT49 0.72 IAI46_22770 50S ribosomal protein L11 methyltransferase 0.72 IAI46_09910 NAD(P)/FAD-dependent oxidoreductase low > 87
Pantoea agglomerans CFBP13505 P0401 0.72 PagCFBP13505_RS10985 50S ribosomal protein L11 methyltransferase 0.71 PagCFBP13505_RS05350 NAD(P)/FAD-dependent oxidoreductase low > 74
Erwinia tracheiphila HP pepo 2.2 0.69 IJEDHG_13510 prmA 50S ribosomal protein L11 methyltransferase 0.71 IJEDHG_00570 NADH dehydrogenase low > 61
Erwinia tracheiphila SCR3 0.69 LU632_RS21500 prmA 50S ribosomal protein L11 methyltransferase 0.71 LU632_RS14740 NAD(P)/FAD-dependent oxidoreductase low > 73
Escherichia coli ECRC101 0.68 MCAODC_08210 prmA 50S ribosomal protein L11 methyltransferase 0.72 MCAODC_22855 ndh NADH-quinone dehydrogenase low > 87
Escherichia coli ECOR38 0.68 HEPCGN_16510 prmA 50S ribosomal protein L11 methyltransferase 0.73 HEPCGN_23990 ndh NADH-quinone dehydrogenase low > 88
Escherichia coli ECRC102 0.68 NIAGMN_15450 prmA 50S ribosomal protein L11 methyltransferase 0.72 NIAGMN_24335 ndh NADH-quinone dehydrogenase low > 80
Escherichia coli ECRC62 0.68 BNILDI_02045 prmA 50S ribosomal protein L11 methyltransferase 0.73 BNILDI_19185 ndh NADH-quinone dehydrogenase low > 75
Escherichia coli Nissle 1917 0.68 ECOLIN_RS18720 50S ribosomal protein L11 methyltransferase 0.73 ECOLIN_RS06400 NADH-quinone dehydrogenase low > 55
Escherichia coli ECRC99 0.68 KEDOAH_10460 prmA 50S ribosomal protein L11 methyltransferase 0.72 KEDOAH_24260 ndh NADH-quinone dehydrogenase — —
Escherichia coli ECRC98 0.68 JDDGAC_21315 prmA 50S ribosomal protein L11 methyltransferase 0.72 JDDGAC_07155 ndh NADH-quinone dehydrogenase low > 87
Escherichia coli BW25113 0.68 b3259 prmA ribosomal protein L11 methyltransferase (NCBI) 0.73 b1109 ndh respiratory NADH dehydrogenase 2/cupric reductase (NCBI) low > 76
Escherichia coli ECRC100 0.68 OKFHMN_17690 prmA 50S ribosomal protein L11 methyltransferase 0.72 OKFHMN_03495 ndh NADH-quinone dehydrogenase low > 79
Escherichia coli BL21 0.68 ECD_03117 methyltransferase for 50S ribosomal subunit protein L11 0.73 ECD_01105 respiratory NADH dehydrogenase 2/cupric reductase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_00446 Ribosomal protein L11 methyltransferase 0.73 OHPLBJKB_02557 NADH dehydrogenase low > 74
Escherichia coli ECOR27 0.68 NOLOHH_09475 prmA 50S ribosomal protein L11 methyltransferase 0.73 NOLOHH_21020 ndh NADH-quinone dehydrogenase low > 76
Escherichia fergusonii Becca 0.68 EFB2_00565 Ribosomal protein L11 methyltransferase 0.73 EFB2_02866 NADH dehydrogenase low > 86
Klebsiella pneumoniae MKP103 0.68 KDGMDA_06320 50S ribosomal protein L11 methyltransferase 0.72 KDGMDA_18770 Type II NADH:quinone oxidoreductase 0.21 24
Shewanella sp. ANA-3 0.68 Shewana3_0400 prmA ribosomal protein L11 methyltransferase (RefSeq) 0.41 Shewana3_3123 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.68 SO0395 prmA ribosomal protein L11 methyltransferase (NCBI ptt file) 0.42 SO3517 ndh NADH dehydrogenase (NCBI ptt file) low > 76
Enterobacter asburiae PDN3 0.67 EX28DRAFT_3311 ribosomal protein L11 methyltransferase 0.73 EX28DRAFT_1821 NADH dehydrogenase, FAD-containing subunit low > 76
Klebsiella michiganensis M5al 0.67 BWI76_RS25555 50S ribosomal protein L11 methyltransferase 0.72 BWI76_RS11175 NADH dehydrogenase — —
Enterobacter sp. TBS_079 0.67 MPMX20_04167 Ribosomal protein L11 methyltransferase 0.73 MPMX20_01790 NADH dehydrogenase low > 85
Erwinia amylovora T8 0.66 OLJFJH_06860 50S ribosomal protein L11 methyltransferase 0.70 OLJFJH_15455 FAD-dependent oxidoreductase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF2125 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) 0.73 GFF3392 NADH dehydrogenase (EC 1.6.99.3) low > 78
Shewanella amazonensis SB2B 0.63 Sama_3224 prmA ribosomal protein L11 methyltransferase (RefSeq) 0.44 Sama_0936 NADH dehydrogenase (RefSeq) low > 62
Shewanella loihica PV-4 0.63 Shew_0331 prmA ribosomal protein L11 methyltransferase (RefSeq) 0.56 Shew_2195 NADH dehydrogenase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.63 MIT1002_03956 Ribosomal protein L11 methyltransferase 0.53 MIT1002_03885 NADH dehydrogenase low > 70
Pseudomonas stutzeri RCH2 0.56 Psest_1018 ribosomal protein L11 methyltransferase 0.54 Psest_0715 NADH dehydrogenase, FAD-containing subunit low > 67
Pseudomonas sp. BP01 0.55 JOY50_RS17645 prmA 50S ribosomal protein L11 methyltransferase 0.54 JOY50_RS27170 NAD(P)/FAD-dependent oxidoreductase low > 84
Pseudomonas aeruginosa PA14 0.53 IKLFDK_29310 50S ribosomal protein L11 methyltransferase 0.54 IKLFDK_01385 FAD-dependent oxidoreductase low > 98
Pseudomonas aeruginosa PUPa3 0.53 DQ20_RS52025 prmA;go_function=S-adenosylmethionine-dependent 50S ribosomal protein L11 methyltransferase 0.54 DQ20_RS56240 NAD(P)/FAD-dependent oxidoreductase low > 101
Pseudomonas sp. S08-1 0.53 OH686_07600 ribosomal protein L11 methyltransferase 0.53 OH686_16450 NADH dehydrogenase low > 80
Pseudomonas aeruginosa MRSN321 0.53 DY961_RS10030 prmA;go_function=S-adenosylmethionine-dependent 50S ribosomal protein L11 methyltransferase 0.54 DY961_RS23775 NAD(P)/FAD-dependent oxidoreductase low > 100
Pseudomonas sp. SVBP6 0.52 COO64_RS18325 prmA 50S ribosomal protein L11 methyltransferase 0.54 COO64_RS11095 NAD(P)/FAD-dependent oxidoreductase low > 93
Pseudomonas segetis P6 0.52 MPMX49_04104 Ribosomal protein L11 methyltransferase 0.56 MPMX49_03913 NADH dehydrogenase low > 75
Pseudomonas putida KT2440 0.52 PP_4818 ribosomal protein L11 methyltransferase 0.54 PP_0626 NADH dehydrogenase low > 96
Pseudomonas lactucae CFBP13502 0.52 GEMAOFIL_00824 Ribosomal protein L11 methyltransferase 0.53 GEMAOFIL_00976 NADH dehydrogenase low > 96
Pseudomonas orientalis W4I3 0.52 QF045_RS05995 50S ribosomal protein L11 methyltransferase 0.52 QF045_RS06840 NAD(P)/FAD-dependent oxidoreductase low > 93
Pseudomonas fluorescens SBW25 0.51 PFLU_RS03035 50S ribosomal protein L11 methyltransferase 0.53 PFLU_RS03905 NAD(P)/FAD-dependent oxidoreductase low > 109
Pseudomonas simiae WCS417 0.51 PS417_02960 ribosomal protein L11 methyltransferase 0.53 PS417_03855 NADH dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_08205 ribosomal protein L11 methyltransferase 0.54 AO356_15965 NADH dehydrogenase low > 104
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS03035 50S ribosomal protein L11 methyltransferase 0.53 PFLU_RS03905 NAD(P)/FAD-dependent oxidoreductase low > 109
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_1310 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) 0.53 Pf1N1B4_2826 NADH dehydrogenase (EC 1.6.99.3) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_4402 [LSU ribosomal protein L11P]-lysine N-methyltransferase 0.53 Psyr_0790 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 86
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_4402 [LSU ribosomal protein L11P]-lysine N-methyltransferase 0.53 Psyr_0790 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 86
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_13670 ribosomal protein L11 methyltransferase 0.53 AO353_14255 NADH dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_3514 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) 0.54 Pf6N2E2_5132 NADH dehydrogenase (EC 1.6.99.3) low > 103
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_53 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) 0.53 PfGW456L13_1496 NADH dehydrogenase (EC 1.6.99.3) low > 87
Pseudomonas sp. DMC3 0.50 GFF3312 Ribosomal protein L11 methyltransferase 0.53 GFF4008 NADH dehydrogenase low > 89
Pseudomonas sp. RS175 0.49 PFR28_05218 Ribosomal protein L11 methyltransferase 0.54 PFR28_03740 NADH dehydrogenase low > 88
Marinobacter adhaerens HP15 0.47 HP15_3223 ribosomal protein L11 methyltransferase 0.51 HP15_3830 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 73
Acinetobacter baumannii LAC-4 0.42 RR41_RS06710 50S ribosomal protein L11 methyltransferase 0.40 RR41_RS05095 NAD(P)/FAD-dependent oxidoreductase low > 55
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS17065 50S ribosomal protein L11 methyltransferase 0.12 ABZR86_RS12540 NAD(P)/FAD-dependent oxidoreductase low > 74
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS06810 50S ribosomal protein L11 methyltransferase 0.36 LRK54_RS07490 NAD(P)/FAD-dependent oxidoreductase low > 59
Rhodanobacter denitrificans MT42 0.42 LRK55_RS06555 50S ribosomal protein L11 methyltransferase 0.36 LRK55_RS07230 NAD(P)/FAD-dependent oxidoreductase low > 63
Acinetobacter radioresistens SK82 0.42 MPMX26_01144 Ribosomal protein L11 methyltransferase 0.37 MPMX26_01006 NADH dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS01660 50S ribosomal protein L11 methyltransferase 0.42 ABZR87_RS15675 NAD(P)/FAD-dependent oxidoreductase low > 80
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS01920 50S ribosomal protein L11 methyltransferase 0.19 HSERO_RS08760 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 78
Methylophilus sp. DMC18 0.38 GFF2034 Ribosomal protein L11 methyltransferase 0.47 GFF2428 NADH dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS27175 50S ribosomal protein L11 methyltransferase 0.40 QEN71_RS17890 NAD(P)/FAD-dependent oxidoreductase low > 153
Ralstonia solanacearum GMI1000 0.37 RS_RS13945 50S ribosomal protein L11 methyltransferase 0.42 RS_RS11190 NAD(P)/FAD-dependent oxidoreductase low > 80
Ralstonia solanacearum PSI07 0.37 RPSI07_RS11245 50S ribosomal protein L11 methyltransferase 0.42 RPSI07_RS13485 NAD(P)/FAD-dependent oxidoreductase low > 81
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS06000 50S ribosomal protein L11 methyltransferase 0.42 RALBFv3_RS03745 NAD(P)/FAD-dependent oxidoreductase low > 76
Ralstonia solanacearum UW163 0.37 UW163_RS07625 50S ribosomal protein L11 methyltransferase 0.42 UW163_RS09925 NAD(P)/FAD-dependent oxidoreductase — —
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.675.1 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) 0.17 Xcc-8004.4769.1 NADH dehydrogenase (EC 1.6.99.3) low > 74
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_06282 [LSU ribosomal protein L11P]-lysine N-methyltransferase 0.41 H281DRAFT_06021 NADH dehydrogenase low > 103
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS17020 ribosomal protein L11 methyltransferase 0.41 BPHYT_RS33605 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 109
Paraburkholderia graminis OAS925 0.36 ABIE53_003569 ribosomal protein L11 methyltransferase 0.41 ABIE53_004853 NADH dehydrogenase low > 113
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS17705 ribosomal protein L11 methyltransferase 0.48 RR42_RS26100 pyridine nucleotide-disulfide oxidoreductase — —
Variovorax sp. SCN45 0.27 GFF4440 Ribosomal protein L11 methyltransferase 0.16 GFF6814 NADH dehydrogenase (EC 1.6.99.3) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF588 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) 0.37 GFF4021 NADH dehydrogenase (EC 1.6.99.3) low > 90
Variovorax sp. OAS795 0.27 ABID97_RS06380 50S ribosomal protein L11 methyltransferase 0.48 ABID97_RS26565 NAD(P)/FAD-dependent oxidoreductase — —
Acidovorax sp. GW101-3H11 0.27 Ac3H11_4027 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) 0.16 Ac3H11_2167 NADH dehydrogenase (EC 1.6.99.3) low > 79
Sphingomonas koreensis DSMZ 15582 0.18 Ga0059261_1324 [LSU ribosomal protein L11P]-lysine N-methyltransferase (EC 2.1.1.-) 0.50 Ga0059261_1466 NADH dehydrogenase, FAD-containing subunit low > 68
Rhizobium sp. OAE497 0.17 ABIE40_RS11730 50S ribosomal protein L11 methyltransferase 0.17 ABIE40_RS11380 NAD(P)/FAD-dependent oxidoreductase low > 107

Not shown: 7 genomes with orthologs for CSW01_01500 only; 18 genomes with orthologs for CSW01_09465 only