Conservation of cofitness between CSW01_12465 and CSW01_06950 in Vibrio cholerae E7946 ATCC 55056

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12465 elongation factor 4 1.0 CSW01_06950 ATP-dependent RNA helicase HrpA 0.62 4
Enterobacter sp. TBS_079 0.87 MPMX20_03440 Elongation factor 4 0.71 MPMX20_02189 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.87 BWI76_RS21335 elongation factor 4 0.70 BWI76_RS13165 ATP-dependent RNA helicase HrpA — —
Erwinia tracheiphila SCR3 0.86 LU632_RS15395 lepA translation elongation factor 4 0.69 LU632_RS12630 hrpA ATP-dependent RNA helicase HrpA low > 73
Erwinia tracheiphila HP pepo 2.2 0.86 IJEDHG_01200 lepA translation elongation factor 4 0.69 IJEDHG_23640 hrpA ATP-dependent RNA helicase HrpA — —
Serratia liquefaciens MT49 0.86 IAI46_19560 elongation factor 4 0.70 IAI46_13330 ATP-dependent RNA helicase HrpA low > 87
Dickeya dadantii 3937 0.86 DDA3937_RS15745 elongation factor 4 0.69 DDA3937_RS12270 ATP-dependent RNA helicase HrpA low > 74
Enterobacter asburiae PDN3 0.86 EX28DRAFT_0076 elongation factor 4 0.71 EX28DRAFT_1357 RNA helicase HrpA low > 76
Rahnella sp. WP5 0.86 EX31_RS21825 elongation factor 4 0.70 EX31_RS06495 ATP-dependent RNA helicase HrpA low > 89
Pantoea agglomerans CFBP13505 P0401 0.86 PagCFBP13505_RS14760 elongation factor 4 0.70 PagCFBP13505_RS06635 ATP-dependent RNA helicase HrpA low > 74
Pectobacterium carotovorum WPP14 0.86 HER17_RS05805 translation elongation factor 4 0.69 HER17_RS09660 ATP-dependent RNA helicase HrpA low > 75
Dickeya dianthicola ME23 0.86 DZA65_RS16910 elongation factor 4 0.69 DZA65_RS12800 ATP-dependent RNA helicase HrpA low > 75
Dickeya dianthicola 67-19 0.86 HGI48_RS15830 elongation factor 4 0.69 HGI48_RS12360 ATP-dependent RNA helicase HrpA low > 71
Klebsiella pneumoniae MKP103 0.85 KDGMDA_28455 translation elongation factor 4 0.71 KDGMDA_20775 ATP-dependent RNA helicase HrpA low > 95
Escherichia coli ECOR27 0.85 NOLOHH_13075 lepA translation elongation factor 4 0.71 NOLOHH_19390 hrpA ATP-dependent RNA helicase HrpA low > 76
Escherichia coli ECRC99 0.85 KEDOAH_06820 lepA translation elongation factor 4 0.71 KEDOAH_26710 hrpA ATP-dependent RNA helicase HrpA — —
Escherichia coli ECRC100 0.85 OKFHMN_21400 lepA translation elongation factor 4 0.71 OKFHMN_01730 hrpA ATP-dependent RNA helicase HrpA low > 79
Escherichia coli ECRC102 0.85 NIAGMN_19170 lepA translation elongation factor 4 0.71 NIAGMN_25865 hrpA ATP-dependent RNA helicase HrpA 0.61 65
Escherichia coli ECRC62 0.85 BNILDI_11875 lepA translation elongation factor 4 0.71 BNILDI_17845 hrpA ATP-dependent RNA helicase HrpA low > 75
Escherichia coli ECRC98 0.85 JDDGAC_25065 lepA translation elongation factor 4 0.71 JDDGAC_04220 hrpA ATP-dependent RNA helicase HrpA low > 87
Escherichia coli ECOR38 0.85 HEPCGN_20545 lepA translation elongation factor 4 0.71 HEPCGN_26110 hrpA ATP-dependent RNA helicase HrpA low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_01138 Elongation factor 4 0.71 OHPLBJKB_02301 hypothetical protein 0.61 27
Escherichia coli BW25113 0.85 b2569 lepA GTP-binding protein LepA (NCBI) 0.71 b1413 hrpA ATP-dependent helicase (RefSeq) low > 76
Escherichia coli BL21 0.85 ECD_02463 back-translocating elongation factor EF4, GTPase 0.71 ECD_01368 putative ATP-dependent helicase low > 61
Escherichia coli Nissle 1917 0.85 ECOLIN_RS14540 translation elongation factor 4 0.71 ECOLIN_RS08180 ATP-dependent RNA helicase HrpA — —
Escherichia coli ECRC101 0.85 MCAODC_11930 lepA translation elongation factor 4 0.71 MCAODC_16205 hrpA ATP-dependent RNA helicase HrpA 0.23 70
Escherichia fergusonii Becca 0.85 EFB2_01327 Elongation factor 4 0.71 EFB2_02565 hypothetical protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2477 Translation elongation factor LepA 0.72 GFF2632 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 78
Pantoea sp. MT58 0.84 IAI47_04870 elongation factor 4 0.70 IAI47_09520 ATP-dependent RNA helicase HrpA low > 76
Erwinia amylovora T8 0.84 OLJFJH_10245 translation elongation factor 4 0.69 OLJFJH_13820 ATP-dependent RNA helicase HrpA low > 58
Shewanella sp. ANA-3 0.83 Shewana3_3028 GTP-binding protein LepA (RefSeq) 0.57 Shewana3_1897 ATP-dependent helicase HrpA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.83 SO1346 lepA GTP-binding protein LepA (NCBI ptt file) 0.57 SO2229 hrpA ATP-dependent helicase HrpA (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.81 Shew_1052 GTP-binding protein LepA (RefSeq) 0.57 Shew_1767 ATP-dependent helicase HrpA (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.81 MIT1002_02715 Elongation factor 4 0.55 MIT1002_01685 ATP-dependent RNA helicase HrpB low > 70
Shewanella amazonensis SB2B 0.81 Sama_0878 GTP-binding protein LepA (RefSeq) 0.57 Sama_1619 ATP-dependent helicase HrpA (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.81 B158DRAFT_2184 GTP-binding protein LepA 0.38 B158DRAFT_1779 ATP-dependent helicase HrpA 0.60 38
Pseudomonas aeruginosa MRSN321 0.78 DY961_RS08665 lepA;go_function=GTPase translation elongation factor 4 0.45 DY961_RS00395 hrpA;go_function=helicase ATP-dependent RNA helicase HrpA low > 100
Pseudomonas aeruginosa PA14 0.78 IKLFDK_03290 translation elongation factor 4 0.45 IKLFDK_16885 ATP-dependent RNA helicase HrpA low > 98
Pseudomonas aeruginosa PUPa3 0.78 DQ20_RS44185 lepA;go_function=GTPase translation elongation factor 4 0.45 DQ20_RS40625 hrpA;go_function=helicase ATP-dependent RNA helicase HrpA low > 101
Pseudomonas segetis P6 0.76 MPMX49_01405 Elongation factor 4 0.43 MPMX49_03273 hypothetical protein — —
Pseudomonas sp. DMC3 0.76 GFF1955 Elongation factor 4 0.45 GFF2341 hypothetical protein — —
Pseudomonas sp. RS175 0.76 PFR28_03525 Elongation factor 4 0.44 PFR28_00739 hypothetical protein — —
Pseudomonas simiae WCS417 0.76 PS417_05180 elongation factor 4 0.44 PS417_20575 ATP-dependent helicase HrpA — —
Pseudomonas lactucae CFBP13502 0.76 GEMAOFIL_01242 Elongation factor 4 0.45 GEMAOFIL_04265 hypothetical protein low > 96
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_4842 Translation elongation factor LepA 0.45 PfGW456L13_4467 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 87
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_17485 elongation factor 4 0.45 AO356_04280 ATP-dependent RNA helicase HrpA low > 104
Pseudomonas fluorescens SBW25 0.76 PFLU_RS05250 elongation factor 4 0.45 PFLU_RS22265 ATP-dependent RNA helicase HrpA low > 109
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS05250 elongation factor 4 0.45 PFLU_RS22265 ATP-dependent RNA helicase HrpA 0.25 84
Pseudomonas stutzeri RCH2 0.76 Psest_3095 GTP-binding protein LepA 0.43 Psest_1339 ATP-dependent helicase HrpA — —
Pseudomonas orientalis W4I3 0.76 QF045_RS08170 translation elongation factor 4 0.45 QF045_RS22485 ATP-dependent RNA helicase HrpA low > 93
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_5423 Translation elongation factor LepA 0.45 Pf6N2E2_2694 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) — —
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_895 Translation elongation factor LepA 0.45 Pf1N1B4_3388 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) — —
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_04520 elongation factor 4 0.45 AO353_18225 ATP-dependent RNA helicase HrpA low > 101
Pseudomonas sp. S08-1 0.75 OH686_20065 elongation factor 4 0.43 OH686_05730 RNA helicase HrpA 0.87 32
Pseudomonas sp. SVBP6 0.75 COO64_RS16545 lepA translation elongation factor 4 0.45 COO64_RS22000 hrpA ATP-dependent RNA helicase HrpA low > 93
Pseudomonas putida KT2440 0.75 PP_1431 Elongation factor 4 0.44 PP_4546 ATP-dependent helicase HrpA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_3954 GTP-binding protein LepA 0.44 Psyr_3831 ATP-dependent helicase HrpA low > 86
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_3954 GTP-binding protein LepA 0.44 Psyr_3831 ATP-dependent helicase HrpA low > 86
Marinobacter adhaerens HP15 0.75 HP15_781 GTP-binding protein LepA 0.44 HP15_1863 RNA helicase, ATP-dependent DEAH box, HrpA type low > 73
Pseudomonas sp. BP01 0.74 JOY50_RS14685 lepA translation elongation factor 4 0.44 JOY50_RS01295 hrpA ATP-dependent RNA helicase HrpA low > 84
Acinetobacter radioresistens SK82 0.73 MPMX26_02159 Elongation factor 4 0.36 MPMX26_02008 hypothetical protein low > 36
Burkholderia phytofirmans PsJN 0.73 BPHYT_RS14380 elongation factor 4 0.36 BPHYT_RS12980 ATP-dependent helicase low > 109
Acinetobacter baumannii LAC-4 0.72 RR41_RS04835 translation elongation factor 4 0.35 RR41_RS10175 ATP-dependent RNA helicase HrpA — —
Paraburkholderia graminis OAS925 0.72 ABIE53_003038 GTP-binding protein LepA 0.40 ABIE53_002813 ATP-dependent helicase HrpA low > 113
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS09650 elongation factor 4 0.40 HSERO_RS17315 ATP-dependent helicase 0.30 45
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS04600 translation elongation factor 4 0.37 QEN71_RS05625 ATP-dependent RNA helicase HrpA 0.58 29
Castellaniella sp019104865 MT123 0.70 ABCV34_RS08335 translation elongation factor 4 0.39 ABCV34_RS02420 ATP-dependent RNA helicase HrpA — —
Cupriavidus basilensis FW507-4G11 0.70 RR42_RS14055 elongation factor 4 0.41 RR42_RS13030 ATP-dependent helicase 0.30 110
Rhodanobacter sp. FW510-T8 0.70 OKGIIK_07885 Elongation factor 4 0.33 OKGIIK_02155 hrpA ATP-dependent RNA helicase HrpA low > 53
Rhodanobacter denitrificans MT42 0.70 LRK55_RS16670 translation elongation factor 4 0.34 LRK55_RS12420 ATP-dependent RNA helicase HrpA low > 63
Rhodanobacter sp000427505 FW510-R12 0.70 LRK53_RS11990 translation elongation factor 4 0.36 LRK53_RS15885 ATP-dependent RNA helicase HrpA low > 59
Rhodanobacter denitrificans FW104-10B01 0.70 LRK54_RS16955 translation elongation factor 4 0.34 LRK54_RS12715 ATP-dependent RNA helicase HrpA low > 59
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS07165 translation elongation factor 4 0.37 ABZR86_RS19720 ATP-dependent RNA helicase HrpA 0.69 1
Lysobacter sp. OAE881 0.69 ABIE51_RS13875 translation elongation factor 4 0.36 ABIE51_RS05155 ATP-dependent RNA helicase HrpA low > 62
Dechlorosoma suillum PS 0.69 Dsui_2457 GTP-binding protein LepA 0.40 Dsui_1373 ATP-dependent helicase HrpA 0.69 5
Ralstonia solanacearum PSI07 0.69 RPSI07_RS18990 elongation factor 4 0.41 RPSI07_RS17865 ATP-dependent RNA helicase HrpA 0.61 10
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF3343 Translation elongation factor LepA 0.37 GFF4301 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. low > 90
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS10190 translation elongation factor 4 0.40 ABZR87_RS11020 ATP-dependent RNA helicase HrpA low > 80
Methylophilus sp. DMC18 0.68 GFF2735 Elongation factor 4 0.43 GFF1094 hypothetical protein low > 43
Acidovorax sp. GW101-3H11 0.68 Ac3H11_1569 Translation elongation factor LepA 0.38 Ac3H11_896 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. low > 79
Ralstonia solanacearum GMI1000 0.68 RS_RS05250 elongation factor 4 0.41 RS_RS06270 ATP-dependent RNA helicase HrpA — —
Ralstonia solanacearum UW163 0.68 UW163_RS11935 elongation factor 4 0.41 UW163_RS12950 ATP-dependent RNA helicase HrpA — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS14470 elongation factor 4 0.41 RALBFv3_RS15490 ATP-dependent RNA helicase HrpA low > 76
Variovorax sp. SCN45 0.68 GFF3867 Translation elongation factor LepA 0.39 GFF247 ATP-dependent helicase HrpA low > 127
Variovorax sp. OAS795 0.67 ABID97_RS08350 translation elongation factor 4 0.39 ABID97_RS16615 ATP-dependent RNA helicase HrpA low > 91

Not shown: 37 genomes with orthologs for CSW01_12465 only; 0 genomes with orthologs for CSW01_06950 only