Conservation of cofitness between CSW01_01120 and CSW01_03090 in Vibrio cholerae E7946 ATCC 55056

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01120 orotate phosphoribosyltransferase 1.0 CSW01_03090 rRNA (cytidine-2'-O-)-methyltransferase 0.71 19
Escherichia coli BL21 0.85 ECD_03499 orotate phosphoribosyltransferase 0.64 ECD_03013 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent low > 61
Escherichia coli BW25113 0.85 b3642 pyrE orotate phosphoribosyltransferase (NCBI) 0.64 b3146 yraL predicted methyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00060 Orotate phosphoribosyltransferase 0.64 OHPLBJKB_00555 Ribosomal RNA small subunit methyltransferase I low > 74
Escherichia coli Nissle 1917 0.85 ECOLIN_RS20750 orotate phosphoribosyltransferase 0.64 ECOLIN_RS18085 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 55
Escherichia coli ECRC62 0.85 BNILDI_04035 pyrE Orotate phosphoribosyltransferase 0.63 BNILDI_01495 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 75
Escherichia coli ECOR38 0.84 HEPCGN_14420 pyrE Orotate phosphoribosyltransferase 0.64 HEPCGN_17110 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 88
Escherichia fergusonii Becca 0.84 EFB2_00171 Orotate phosphoribosyltransferase 0.64 EFB2_00677 Ribosomal RNA small subunit methyltransferase I low > 86
Klebsiella michiganensis M5al 0.84 BWI76_RS27385 orotate phosphoribosyltransferase 0.60 BWI76_RS24910 rRNA (cytidine-2'-O-)-methyltransferase low > 92
Shewanella amazonensis SB2B 0.84 Sama_0321 pyrE orotate phosphoribosyltransferase (RefSeq) 0.62 Sama_3353 hypothetical protein (RefSeq) low > 62
Klebsiella pneumoniae MKP103 0.84 KDGMDA_08050 Orotate phosphoribosyltransferase 0.58 KDGMDA_05780 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 95
Shewanella loihica PV-4 0.84 Shew_3487 pyrE orotate phosphoribosyltransferase (RefSeq) 0.63 Shew_0228 uroporphyrin-III C/tetrapyrrole methyltransferase (RefSeq) low > 60
Escherichia coli ECRC101 0.84 MCAODC_06110 pyrE Orotate phosphoribosyltransferase 0.64 MCAODC_08755 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 88
Escherichia coli ECRC102 0.84 NIAGMN_13360 pyrE Orotate phosphoribosyltransferase 0.64 NIAGMN_15995 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 80
Escherichia coli ECOR27 0.84 NOLOHH_07480 pyrE Orotate phosphoribosyltransferase 0.63 NOLOHH_10035 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 76
Escherichia coli ECRC98 0.84 JDDGAC_19225 pyrE Orotate phosphoribosyltransferase 0.64 JDDGAC_21860 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 87
Escherichia coli ECRC100 0.84 OKFHMN_15600 pyrE Orotate phosphoribosyltransferase 0.64 OKFHMN_18235 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 79
Escherichia coli ECRC99 0.84 KEDOAH_12550 pyrE Orotate phosphoribosyltransferase 0.64 KEDOAH_09915 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF367 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.61 GFF1521 rRNA small subunit methyltransferase I low > 78
Dickeya dadantii 3937 0.83 DDA3937_RS20535 orotate phosphoribosyltransferase 0.64 DDA3937_RS01715 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 74
Shewanella sp. ANA-3 0.83 Shewana3_3776 pyrE orotate phosphoribosyltransferase (RefSeq) 0.62 Shewana3_3879 hypothetical protein (RefSeq) low > 73
Enterobacter asburiae PDN3 0.83 EX28DRAFT_3892 orotate phosphoribosyltransferase (EC 2.4.2.10) 0.61 EX28DRAFT_3195 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Enterobacter sp. TBS_079 0.83 MPMX20_00093 Orotate phosphoribosyltransferase 0.61 MPMX20_04050 Ribosomal RNA small subunit methyltransferase I low > 85
Shewanella oneidensis MR-1 0.83 SO4255 pyrE orotate phosphoribosyltransferase (NCBI ptt file) 0.63 SO0301 hypothetical methyltransferase (NCBI ptt file) low > 76
Pectobacterium carotovorum WPP14 0.82 HER17_RS20850 orotate phosphoribosyltransferase 0.65 HER17_RS19860 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 75
Serratia liquefaciens MT49 0.81 IAI46_24845 orotate phosphoribosyltransferase 0.59 IAI46_22295 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 86
Erwinia amylovora T8 0.81 OLJFJH_05770 orotate phosphoribosyltransferase 0.65 OLJFJH_02280 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 58
Rahnella sp. WP5 0.81 EX31_RS14500 orotate phosphoribosyltransferase 0.61 EX31_RS12550 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 89
Dickeya dianthicola ME23 0.81 DZA65_RS00735 orotate phosphoribosyltransferase 0.63 DZA65_RS01685 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS00680 orotate phosphoribosyltransferase 0.64 HGI48_RS01610 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 71
Erwinia tracheiphila HP pepo 2.2 0.80 IJEDHG_07760 pyrE orotate phosphoribosyltransferase 0.63 IJEDHG_06680 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 61
Pantoea agglomerans CFBP13505 P0401 0.80 PagCFBP13505_RS18745 orotate phosphoribosyltransferase 0.63 PagCFBP13505_RS11450 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 74
Pantoea sp. MT58 0.80 IAI47_00600 orotate phosphoribosyltransferase 0.61 IAI47_02850 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 76
Erwinia tracheiphila SCR3 0.80 LU632_RS22015 pyrE orotate phosphoribosyltransferase 0.64 LU632_RS02230 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 74
Alteromonas macleodii MIT1002 0.77 MIT1002_04070 Orotate phosphoribosyltransferase 0.49 MIT1002_03113 Ribosomal RNA small subunit methyltransferase I — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_0216 orotate phosphoribosyltransferase 0.53 Psyr_4112 Protein of unknown function UPF0011 — —
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_0216 orotate phosphoribosyltransferase 0.53 Psyr_4112 Protein of unknown function UPF0011 — —
Pseudomonas sp. RS175 0.71 PFR28_04417 Orotate phosphoribosyltransferase 0.53 PFR28_03597 Ribosomal RNA small subunit methyltransferase I — —
Pseudomonas stutzeri RCH2 0.71 Psest_3810 orotate phosphoribosyltransferase 0.52 Psest_3270 probable S-adenosylmethionine-dependent methyltransferase, YraL family low > 67
Pseudomonas sp. S08-1 0.70 OH686_13590 Orotate phosphoribosyltransferase 0.51 OH686_08340 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 80
Pseudomonas sp. SVBP6 0.69 COO64_RS01495 pyrE orotate phosphoribosyltransferase 0.54 COO64_RS11845 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 93
Pseudomonas aeruginosa PA14 0.69 IKLFDK_26800 Orotate phosphoribosyltransferase 0.50 IKLFDK_01980 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Pseudomonas segetis P6 0.68 MPMX49_00027 Orotate phosphoribosyltransferase 0.56 MPMX49_03819 Ribosomal RNA small subunit methyltransferase I — —
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4370 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.53 Pf6N2E2_5346 rRNA small subunit methyltransferase I — —
Pseudomonas sp. BP01 0.68 JOY50_RS09035 pyrE orotate phosphoribosyltransferase 0.52 JOY50_RS15165 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 84
Pseudomonas putida KT2440 0.68 PP_5291 Orotate phosphoribosyltransferase 0.52 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_09245 orotate phosphoribosyltransferase 0.53 AO353_15290 methyltransferase — —
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0786 orotate phosphoribosyltransferase (EC 2.4.2.10) 0.45 B158DRAFT_2109 probable S-adenosylmethionine-dependent methyltransferase, YraL family — —
Pseudomonas sp. DMC3 0.67 GFF411 Orotate phosphoribosyltransferase 0.54 GFF4428 Ribosomal RNA small subunit methyltransferase I low > 89
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_12520 orotate phosphoribosyltransferase 0.53 AO356_17110 methyltransferase low > 104
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_788 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.51 PfGW456L13_1643 rRNA small subunit methyltransferase I — —
Pseudomonas lactucae CFBP13502 0.67 GEMAOFIL_00027 Orotate phosphoribosyltransferase 0.53 GEMAOFIL_01121 Ribosomal RNA small subunit methyltransferase I — —
Pseudomonas fluorescens SBW25 0.67 PFLU_RS29475 orotate phosphoribosyltransferase 0.53 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS29475 orotate phosphoribosyltransferase 0.53 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Pseudomonas simiae WCS417 0.67 PS417_27795 orotate phosphoribosyltransferase 0.53 PS417_04590 methyltransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_2120 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.52 Pf1N1B4_953 rRNA small subunit methyltransferase I — —
Marinobacter adhaerens HP15 0.63 HP15_298 orotate phosphoribosyltransferase 0.46 HP15_554 tetrapyrrole methylase family protein low > 73
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS15640 orotate phosphoribosyltransferase 0.49 ABZR86_RS11380 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 74
Dechlorosoma suillum PS 0.57 Dsui_0873 orotate phosphoribosyltransferase 0.45 Dsui_0251 putative S-adenosylmethionine-dependent methyltransferase, YraL family — —
Rhodanobacter sp000427505 FW510-R12 0.57 LRK53_RS17885 orotate phosphoribosyltransferase 0.45 LRK53_RS16300 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 59
Castellaniella sp019104865 MT123 0.56 ABCV34_RS10890 orotate phosphoribosyltransferase 0.38 ABCV34_RS14320 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Rhodanobacter denitrificans MT42 0.56 LRK55_RS08720 orotate phosphoribosyltransferase 0.45 LRK55_RS11925 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS09190 orotate phosphoribosyltransferase 0.45 LRK54_RS12190 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_15685 pyrE orotate phosphoribosyltransferase 0.44 OKGIIK_11735 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 53
Methylophilus sp. DMC18 0.55 GFF2065 Orotate phosphoribosyltransferase 0.49 GFF2450 Ribosomal RNA small subunit methyltransferase I — —
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS01225 orotate phosphoribosyltransferase 0.37 RR42_RS19740 16S rRNA methyltransferase — —
Acinetobacter radioresistens SK82 0.53 MPMX26_02937 Orotate phosphoribosyltransferase 0.44 MPMX26_02282 Ribosomal RNA small subunit methyltransferase I low > 36
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS23380 orotate phosphoribosyltransferase 0.45 HSERO_RS23345 16S rRNA methyltransferase — —
Acinetobacter baumannii LAC-4 0.53 RR41_RS00800 orotate phosphoribosyltransferase 0.44 RR41_RS09275 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Acidovorax sp. GW101-3H11 0.52 Ac3H11_3341 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.34 Ac3H11_4466 rRNA small subunit methyltransferase I — —
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS05590 orotate phosphoribosyltransferase 0.33 ABZR87_RS03815 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 80
Ralstonia solanacearum UW163 0.51 UW163_RS03505 orotate phosphoribosyltransferase 0.34 UW163_RS05115 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS10075 orotate phosphoribosyltransferase 0.34 RALBFv3_RS08495 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Ralstonia solanacearum GMI1000 0.50 RS_RS00685 orotate phosphoribosyltransferase 0.33 RS_RS16360 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Variovorax sp. OAS795 0.50 ABID97_RS03910 orotate phosphoribosyltransferase 0.33 ABID97_RS00285 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 91
Variovorax sp. SCN45 0.50 GFF5065 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.33 GFF3735 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (EC 2.1.1.198) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF1882 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.32 GFF2715 rRNA small subunit methyltransferase I low > 90
Ralstonia solanacearum PSI07 0.50 RPSI07_RS23295 orotate phosphoribosyltransferase 0.33 RPSI07_RS08730 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.4884.1 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.47 Xcc-8004.4371.1 rRNA small subunit methyltransferase I low > 74
Lysobacter sp. OAE881 0.44 ABIE51_RS00065 orotate phosphoribosyltransferase 0.44 ABIE51_RS04695 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 62
Bifidobacterium breve UCC2003 0.41 BBR_RS15455 orotate phosphoribosyltransferase 0.32 BBR_RS19915 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 34

Not shown: 0 genomes with orthologs for CSW01_01120 only; 22 genomes with orthologs for CSW01_03090 only