| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_03090 | | rRNA (cytidine-2'-O-)-methyltransferase | 1.0 | CSW01_02860 | | sulfate ABC transporter permease subunit CysW | 0.71 | 7 |
| Pectobacterium carotovorum WPP14 | 0.65 | HER17_RS19860 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.61 | HER17_RS17215 | | sulfate/thiosulfate ABC transporter permease CysW | low | > 75 |
| Erwinia amylovora T8 | 0.65 | OLJFJH_02280 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.57 | OLJFJH_10825 | | sulfate/thiosulfate ABC transporter permease CysW | low | > 58 |
| Escherichia coli ECOR38 | 0.64 | HEPCGN_17110 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.62 | HEPCGN_21335 | cysW | sulfate/thiosulfate ABC transporter permease CysW | low | > 88 |
| Escherichia coli Nissle 1917 | 0.64 | ECOLIN_RS18085 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.62 | ECOLIN_RS13910 | | sulfate/thiosulfate ABC transporter permease CysW | low | > 55 |
| Escherichia fergusonii Becca | 0.64 | EFB2_00677 | | Ribosomal RNA small subunit methyltransferase I | 0.62 | EFB2_01454 | | Sulfate transport system permease protein CysW | low | > 86 |
| Escherichia coli BL21 | 0.64 | ECD_03013 | | 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent | 0.61 | ECD_02323 | | sulfate/thiosulfate ABC transporter permease | low | > 61 |
| Escherichia coli ECRC99 | 0.64 | KEDOAH_09915 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.61 | KEDOAH_06060 | cysW | sulfate/thiosulfate ABC transporter permease CysW | — | — |
| Dickeya dadantii 3937 | 0.64 | DDA3937_RS01715 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.46 | DDA3937_RS15840 | | sulfate ABC transporter permease subunit CysW | low | > 74 |
| Escherichia coli ECRC98 | 0.64 | JDDGAC_21860 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.61 | JDDGAC_26110 | cysW | sulfate/thiosulfate ABC transporter permease CysW | low | > 87 |
| Escherichia coli ECRC100 | 0.64 | OKFHMN_18235 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.61 | OKFHMN_22160 | cysW | sulfate/thiosulfate ABC transporter permease CysW | low | > 79 |
| Escherichia coli BW25113 | 0.64 | b3146 | yraL | predicted methyltransferase (NCBI) | 0.62 | b2423 | cysW | sulfate/thiosulfate transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.64 | MCAODC_08755 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.61 | MCAODC_12690 | cysW | sulfate/thiosulfate ABC transporter permease CysW | low | > 87 |
| Escherichia coli ECRC102 | 0.64 | NIAGMN_15995 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.61 | NIAGMN_19930 | cysW | sulfate/thiosulfate ABC transporter permease CysW | low | > 80 |
| Dickeya dianthicola 67-19 | 0.64 | HGI48_RS01610 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.46 | HGI48_RS15980 | | sulfate ABC transporter permease subunit CysW | low | > 71 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.64 | OHPLBJKB_00555 | | Ribosomal RNA small subunit methyltransferase I | 0.62 | OHPLBJKB_01300 | | Sulfate transport system permease protein CysW | low | > 74 |
| Erwinia tracheiphila SCR3 | 0.64 | LU632_RS02230 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.58 | LU632_RS06685 | cysW | sulfate/thiosulfate ABC transporter permease CysW | low | > 73 |
| Erwinia tracheiphila HP pepo 2.2 | 0.63 | IJEDHG_06680 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.58 | IJEDHG_16810 | cysW | sulfate/thiosulfate ABC transporter permease CysW | low | > 61 |
| Dickeya dianthicola ME23 | 0.63 | DZA65_RS01685 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.45 | DZA65_RS17065 | | sulfate ABC transporter permease subunit CysW | low | > 75 |
| Escherichia coli ECOR27 | 0.63 | NOLOHH_10035 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.61 | NOLOHH_13840 | cysW | sulfate/thiosulfate ABC transporter permease CysW | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.63 | PagCFBP13505_RS11450 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.60 | PagCFBP13505_RS19940 | | sulfate/thiosulfate ABC transporter permease CysW | low | > 74 |
| Escherichia coli ECRC62 | 0.63 | BNILDI_01495 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.62 | BNILDI_12705 | cysW | sulfate/thiosulfate ABC transporter permease CysW | low | > 75 |
| Shewanella oneidensis MR-1 | 0.63 | SO0301 | | hypothetical methyltransferase (NCBI ptt file) | 0.70 | SO3601 | cysW-1 | sulfate ABC transporter, permease protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.62 | Shewana3_3879 | | hypothetical protein (RefSeq) | 0.72 | Shewana3_3191 | | sulfate ABC transporter, inner membrane subunit CysW (RefSeq) | low | > 73 |
| Enterobacter asburiae PDN3 | 0.61 | EX28DRAFT_3195 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.61 | EX28DRAFT_0207 | | sulfate ABC transporter, permease protein CysW | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.61 | GFF1521 | | rRNA small subunit methyltransferase I | 0.61 | GFF2057 | | Sulfate transport system permease protein CysW | low | > 78 |
| Enterobacter sp. TBS_079 | 0.61 | MPMX20_04050 | | Ribosomal RNA small subunit methyltransferase I | 0.61 | MPMX20_03315 | | Sulfate transport system permease protein CysW | low | > 85 |
| Rahnella sp. WP5 | 0.61 | EX31_RS12550 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.62 | EX31_RS20215 | | sulfate/thiosulfate ABC transporter permease CysW | low | > 89 |
| Pantoea sp. MT58 | 0.61 | IAI47_02850 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.58 | IAI47_05395 | | sulfate/thiosulfate ABC transporter permease CysW | low | > 76 |
| Klebsiella michiganensis M5al | 0.60 | BWI76_RS24910 | | rRNA (cytidine-2'-O-)-methyltransferase | 0.61 | BWI76_RS20695 | | sulfate/thiosulfate transporter permease subunit | low | > 92 |
| Serratia liquefaciens MT49 | 0.59 | IAI46_22295 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.59 | IAI46_18500 | | sulfate/thiosulfate ABC transporter permease CysW | low | > 87 |
| Klebsiella pneumoniae MKP103 | 0.58 | KDGMDA_05780 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.60 | KDGMDA_27535 | | sulfate/thiosulfate ABC transporter permease CysW | low | > 95 |
| Pseudomonas segetis P6 | 0.55 | ACVTMO_RS18925 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.48 | ACVTMO_RS05715 | cysW | sulfate ABC transporter permease subunit CysW | low | > 75 |
| Pseudomonas sp. SVBP6 | 0.54 | COO64_RS11845 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.51 | COO64_RS12520 | cysW | sulfate ABC transporter permease subunit CysW | low | > 93 |
| Pseudomonas sp. DMC3 | 0.54 | GFF4428 | | Ribosomal RNA small subunit methyltransferase I | 0.49 | GFF4247 | | Sulfate transport system permease protein CysW | low | > 89 |
| Pseudomonas fluorescens FW300-N2E2 | 0.53 | Pf6N2E2_5346 | | rRNA small subunit methyltransferase I | 0.49 | Pf6N2E2_4003 | | Sulfate transport system permease protein CysW | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_17110 | | methyltransferase | 0.49 | AO356_10675 | | sulfate ABC transporter permease | low | > 104 |
| Pseudomonas lactucae CFBP13502 | 0.53 | GEMAOFIL_01121 | | Ribosomal RNA small subunit methyltransferase I | 0.49 | GEMAOFIL_00411 | | Sulfate transport system permease protein CysW | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.53 | Psyr_4112 | | Protein of unknown function UPF0011 | 0.51 | Psyr_0082 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.53 | Psyr_4112 | | Protein of unknown function UPF0011 | 0.51 | Psyr_0082 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.53 | AO353_15290 | | methyltransferase | 0.48 | AO353_11550 | | sulfate ABC transporter permease | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.53 | PFLU_RS04655 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.49 | PFLU_RS00955 | | sulfate ABC transporter permease subunit CysW | low | > 109 |
| Pseudomonas orientalis W4I3 | 0.53 | QF045_RS07580 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.49 | QF045_RS04010 | | sulfate ABC transporter permease subunit CysW | low | > 93 |
| Pseudomonas simiae WCS417 | 0.53 | PS417_04590 | | methyltransferase | 0.49 | PS417_00940 | | sulfate ABC transporter permease | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.53 | PFLU_RS04655 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.49 | PFLU_RS00955 | | sulfate ABC transporter permease subunit CysW | low | > 109 |
| Pseudomonas sp. RS175 | 0.53 | PFR28_03597 | | Ribosomal RNA small subunit methyltransferase I | 0.49 | PFR28_04764 | | Sulfate transport system permease protein CysW | 0.23 | 87 |
| Pseudomonas stutzeri RCH2 | 0.52 | Psest_3270 | | probable S-adenosylmethionine-dependent methyltransferase, YraL family | 0.50 | Psest_4062 | | sulfate ABC transporter, permease protein CysW | low | > 67 |
| Pseudomonas sp. BP01 | 0.52 | JOY50_RS15165 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.51 | JOY50_RS20510 | cysW | sulfate ABC transporter permease subunit CysW | low | > 84 |
| Pseudomonas putida KT2440 | 0.52 | PP_1326 | | 16S rRNA 2'-O-ribose C1402 methyltransferase | 0.51 | PP_5169 | | sulfate ABC transporter, inner membrane subunit CysW | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.52 | Pf1N1B4_953 | | rRNA small subunit methyltransferase I | 0.48 | Pf1N1B4_1725 | | Sulfate transport system permease protein CysW | — | — |
| Pseudomonas sp. S08-1 | 0.51 | OH686_08340 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.50 | OH686_11680 | | sulfate ABC transporter, permease protein CysW | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.51 | PfGW456L13_1643 | | rRNA small subunit methyltransferase I | 0.48 | PfGW456L13_484 | | Sulfate transport system permease protein CysW | low | > 87 |
| Pseudomonas aeruginosa PUPa3 | 0.50 | DQ20_RS56825 | rsmI;go_function=rRNA | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.51 | DQ20_RS37940 | cysW;go_component=plasma | sulfate ABC transporter permease subunit CysW | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.50 | IKLFDK_01980 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.51 | IKLFDK_24055 | | sulfate ABC transporter permease subunit CysW | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.50 | DY961_RS24365 | rsmI;go_function=rRNA | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.51 | DY961_RS21350 | cysW;go_component=plasma | sulfate ABC transporter permease subunit CysW | low | > 100 |
| Methylophilus sp. DMC18 | 0.49 | GFF2450 | | Ribosomal RNA small subunit methyltransferase I | 0.55 | GFF403 | | Sulfate transport system permease protein CysW | low | > 43 |
| Dyella japonica UNC79MFTsu3.2 | 0.49 | ABZR86_RS11380 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.46 | ABZR86_RS02890 | | sulfate ABC transporter permease subunit CysW | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.47 | Xcc-8004.4371.1 | | rRNA small subunit methyltransferase I | 0.45 | Xcc-8004.4085.1 | | Sulfate transport system permease protein CysW | low | > 74 |
| Marinobacter adhaerens HP15 | 0.46 | HP15_554 | | tetrapyrrole methylase family protein | 0.70 | HP15_1346 | | sulfate ABC transporter, inner membrane subunit CysW | low | > 73 |
| Dechlorosoma suillum PS | 0.45 | Dsui_0251 | | putative S-adenosylmethionine-dependent methyltransferase, YraL family | 0.53 | Dsui_0259 | | sulfate ABC transporter, permease protein CysW | low | > 51 |
| Rhodanobacter sp000427505 FW510-R12 | 0.45 | LRK53_RS16300 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.48 | LRK53_RS12170 | | sulfate ABC transporter permease subunit CysW | low | > 59 |
| Herbaspirillum seropedicae SmR1 | 0.45 | HSERO_RS23345 | | 16S rRNA methyltransferase | 0.55 | HSERO_RS08235 | | sulfate ABC transporter permease | low | > 78 |
| Lysobacter sp. OAE881 | 0.44 | ABIE51_RS04695 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.47 | ABIE51_RS01845 | | sulfate ABC transporter permease subunit CysW | low | > 62 |
| Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_11735 | rsmI | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.48 | OKGIIK_10925 | cysW | sulfate ABC transporter permease subunit CysW | low | > 53 |
| Acinetobacter baumannii LAC-4 | 0.44 | RR41_RS09275 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.54 | RR41_RS04780 | | sulfate ABC transporter permease subunit CysW | low | > 55 |
| Acinetobacter radioresistens SK82 | 0.44 | MPMX26_02282 | | Ribosomal RNA small subunit methyltransferase I | 0.57 | MPMX26_02169 | | Sulfate transport system permease protein CysW | low | > 36 |
| Paraburkholderia sabiae LMG 24235 | 0.42 | QEN71_RS00655 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.52 | QEN71_RS22580 | | sulfate ABC transporter permease subunit CysW | low | > 153 |
| Synechocystis sp000284455 PCC 6803 | 0.40 | SGL_RS09835 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.45 | SGL_RS17155 | | sulfate ABC transporter permease subunit CysW | low | > 52 |
| Rhizobium sp. OAE497 | 0.38 | ABIE40_RS01370 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.48 | ABIE40_RS24580 | | sulfate ABC transporter permease subunit CysW | low | > 107 |
| Castellaniella sp019104865 MT123 | 0.38 | ABCV34_RS14320 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.50 | ABCV34_RS03945 | | sulfate ABC transporter permease subunit CysW | low | > 48 |
| Synechococcus elongatus PCC 7942 | 0.38 | Synpcc7942_0174 | | hypothetical protein | 0.47 | Synpcc7942_1685 | cysW | Sulphate transport system permease protein 2 | low | > 38 |
| Cupriavidus basilensis FW507-4G11 | 0.37 | RR42_RS19740 | | 16S rRNA methyltransferase | 0.57 | RR42_RS12255 | | sulfate/thiosulfate transporter permease subunit | low | > 128 |
| Agrobacterium fabrum C58 | 0.37 | Atu0302 | | tetrapyrrole methylase family protein | 0.58 | Atu3502 | | ABC transporter permease | low | > 89 |
| Rhodopseudomonas palustris CGA009 | 0.36 | TX73_001680 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.46 | TX73_003865 | | sulfate ABC transporter permease subunit CysW | low | > 86 |
| Bosea sp. OAE506 | 0.35 | ABIE41_RS03315 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.50 | ABIE41_RS15350 | | sulfate ABC transporter permease subunit CysW | low | > 77 |
| Azospirillum sp. SherDot2 | 0.35 | MPMX19_02471 | | Ribosomal RNA small subunit methyltransferase I | 0.53 | MPMX19_04168 | | Sulfate transport system permease protein CysW | low | > 112 |
| Azospirillum brasilense Sp245 | 0.34 | AZOBR_RS02155 | | 16S rRNA methyltransferase | 0.55 | AZOBR_RS19275 | | sulfate/thiosulfate transporter permease subunit | low | > 97 |
| Acidovorax sp. GW101-3H11 | 0.34 | Ac3H11_4466 | | rRNA small subunit methyltransferase I | 0.52 | Ac3H11_910 | | Sulfate transport system permease protein CysW | — | — |
| Ralstonia solanacearum UW163 | 0.34 | UW163_RS05115 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.54 | UW163_RS13420 | | sulfate ABC transporter permease subunit CysW | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.34 | RALBFv3_RS08495 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.54 | RALBFv3_RS00090 | | sulfate ABC transporter permease subunit CysW | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.33 | RPSI07_RS08730 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.54 | RPSI07_RS17395 | | sulfate ABC transporter permease subunit CysW | low | > 81 |
| Variovorax sp. SCN45 | 0.33 | GFF3735 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (EC 2.1.1.198) | 0.60 | GFF1289 | | Sulfate transport system permease protein CysW | low | > 127 |
| Variovorax sp. OAS795 | 0.33 | ABID97_RS00285 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.60 | ABID97_RS15580 | | sulfate ABC transporter permease subunit CysW | low | > 91 |
| Ralstonia solanacearum GMI1000 | 0.33 | RS_RS16360 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.52 | RS_RS06750 | | sulfate ABC transporter permease subunit CysW | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.33 | ABZR87_RS03815 | | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | 0.55 | ABZR87_RS11545 | | sulfate ABC transporter permease subunit CysW | low | > 80 |
| Caulobacter crescentus NA1000 Δfur | 0.32 | CCNA_00143 | | ribosomal RNA small subunit methyltransferase I | 0.49 | CCNA_01669 | | sulfate transport system permease protein cysW | low | > 67 |
| Caulobacter crescentus NA1000 | 0.32 | CCNA_00143 | | ribosomal RNA small subunit methyltransferase I | 0.49 | CCNA_01669 | | sulfate transport system permease protein cysW | low | > 66 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF2715 | | rRNA small subunit methyltransferase I | 0.55 | GFF5098 | | Sulfate transport system permease protein CysW | low | > 90 |
| Xanthobacter sp. DMC5 | 0.31 | GFF2243 | | Ribosomal RNA small subunit methyltransferase I | 0.48 | GFF2440 | | Sulfate transport system permease protein CysW | — | — |
Not shown: 17 genomes with orthologs for CSW01_03090 only; 2 genomes with orthologs for CSW01_02860 only