Conservation of cofitness between CSW01_03170 and CSW01_02840 in Vibrio cholerae E7946 ATCC 55056

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03170 ATP-dependent helicase HrpB 1.0 CSW01_02840 DNA mismatch repair protein MutS 0.62 4
Serratia liquefaciens MT49 0.46 IAI46_21195 ATP-dependent helicase HrpB 0.70 IAI46_03800 DNA mismatch repair protein MutS low > 86
Erwinia amylovora T8 0.46 OLJFJH_00750 ATP-dependent helicase HrpB 0.69 OLJFJH_09385 DNA mismatch repair protein MutS low > 58
Enterobacter asburiae PDN3 0.44 EX28DRAFT_3737 ATP-dependent helicase HrpB 0.69 EX28DRAFT_2829 DNA mismatch repair protein MutS low > 76
Rahnella sp. WP5 0.44 EX31_RS03235 ATP-dependent helicase HrpB 0.70 EX31_RS07820 DNA mismatch repair protein MutS low > 89
Escherichia coli ECRC99 0.44 KEDOAH_17825 hrpB ATP-dependent helicase HrpB 0.68 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC100 0.44 OKFHMN_10330 hrpB ATP-dependent helicase HrpB 0.68 OKFHMN_20525 mutS DNA mismatch repair protein MutS low > 79
Erwinia tracheiphila HP pepo 2.2 0.44 IJEDHG_15075 hrpB ATP-dependent RNA helicase HrpB 0.69 IJEDHG_17505 mutS DNA mismatch repair protein MutS low > 61
Escherichia coli ECRC102 0.44 NIAGMN_08180 hrpB ATP-dependent helicase HrpB 0.68 NIAGMN_18295 mutS DNA mismatch repair protein MutS low > 80
Escherichia coli ECRC98 0.44 JDDGAC_13925 hrpB ATP-dependent helicase HrpB 0.68 JDDGAC_24190 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECRC101 0.44 MCAODC_00845 hrpB ATP-dependent helicase HrpB 0.68 MCAODC_11050 mutS DNA mismatch repair protein MutS low > 88
Enterobacter sp. TBS_079 0.44 MPMX20_00834 ATP-dependent RNA helicase HrpB 0.69 MPMX20_03619 DNA mismatch repair protein MutS low > 85
Escherichia fergusonii Becca 0.44 EFB2_03896 ATP-dependent RNA helicase HrpB 0.68 EFB2_01179 DNA mismatch repair protein MutS low > 86
Escherichia coli BL21 0.44 ECD_00147 putative ATP-dependent helicase 0.68 ECD_02583 methyl-directed mismatch repair protein low > 61
Escherichia coli ECOR38 0.44 HEPCGN_08280 hrpB ATP-dependent helicase HrpB 0.68 HEPCGN_19705 mutS DNA mismatch repair protein MutS low > 88
Klebsiella pneumoniae MKP103 0.44 KDGMDA_13285 ATP-dependent helicase HrpB 0.70 KDGMDA_03170 DNA mismatch repair protein MutS low > 95
Klebsiella michiganensis M5al 0.44 BWI76_RS05030 ATP-dependent helicase 0.69 BWI76_RS22600 DNA mismatch repair protein MutS low > 92
Escherichia coli Nissle 1917 0.44 ECOLIN_RS00830 ATP-dependent helicase HrpB 0.68 ECOLIN_RS15275 DNA mismatch repair protein MutS low > 55
Escherichia coli BW25113 0.43 b0148 hrpB helicase, ATP-dependent (VIMSS) 0.68 b2733 mutS DNA mismatch repair protein (NCBI) low > 76
Escherichia coli ECRC62 0.43 BNILDI_08995 hrpB ATP-dependent helicase HrpB 0.68 BNILDI_10920 mutS DNA mismatch repair protein MutS low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF84 ATP-dependent helicase HrpB 0.69 GFF4773 DNA mismatch repair protein MutS low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03514 hypothetical protein 0.68 OHPLBJKB_01000 DNA mismatch repair protein MutS low > 74
Pectobacterium carotovorum WPP14 0.43 HER17_RS05595 ATP-dependent helicase HrpB 0.70 HER17_RS16220 DNA mismatch repair protein MutS low > 75
Escherichia coli ECOR27 0.43 NOLOHH_02675 hrpB ATP-dependent helicase HrpB 0.68 NOLOHH_12370 mutS DNA mismatch repair protein MutS low > 76
Dickeya dianthicola 67-19 0.43 HGI48_RS16035 ATP-dependent helicase HrpB 0.70 HGI48_RS05230 DNA mismatch repair protein MutS low > 71
Dickeya dianthicola ME23 0.43 DZA65_RS17120 ATP-dependent helicase HrpB 0.70 DZA65_RS05570 DNA mismatch repair protein MutS low > 75
Dickeya dadantii 3937 0.43 DDA3937_RS15920 ATP-dependent helicase HrpB 0.70 DDA3937_RS05230 DNA mismatch repair protein MutS low > 74
Pantoea sp. MT58 0.41 IAI47_15620 ATP-dependent helicase HrpB 0.70 IAI47_04240 DNA mismatch repair protein MutS low > 76
Pantoea agglomerans CFBP13505 P0401 0.41 PagCFBP13505_RS13385 ATP-dependent helicase HrpB 0.70 PagCFBP13505_RS16730 DNA mismatch repair protein MutS low > 74
Shewanella oneidensis MR-1 0.39 SO0632 hrpB ATP-dependent helicase HrpB (NCBI ptt file) 0.64 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.38 Shewana3_0622 ATP-dependent helicase HrpB (RefSeq) 0.65 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) low > 73
Pseudomonas sp. S08-1 0.37 OH686_08800 ATP-dependent helicase HrpB 0.56 OH686_18195 DNA mismatch repair protein MutS low > 80
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_5038 ATP-dependent helicase HrpB 0.56 Pf6N2E2_3035 DNA mismatch repair protein MutS low > 103
Pseudomonas simiae WCS417 0.37 PS417_24550 ATP-dependent helicase 0.55 PS417_05680 DNA mismatch repair protein MutS low > 88
Shewanella amazonensis SB2B 0.37 Sama_2972 ATP-dependent helicase HrpB (RefSeq) 0.64 Sama_1045 DNA mismatch repair protein MutS (RefSeq) low > 62
Marinobacter adhaerens HP15 0.37 HP15_3782 RNA helicase, ATP-dependent DEAH box, HrpB type 0.57 HP15_1047 DNA mismatch repair protein MutS low > 73
Pseudomonas aeruginosa PA14 0.36 IKLFDK_20430 ATP-dependent helicase HrpB 0.57 IKLFDK_18480 DNA mismatch repair protein MutS low > 100
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS26480 ATP-dependent helicase HrpB 0.55 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas fluorescens SBW25 0.36 PFLU_RS26480 ATP-dependent helicase HrpB 0.55 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas stutzeri RCH2 0.36 Psest_0629 ATP-dependent helicase HrpB 0.56 Psest_2875 DNA mismatch repair protein MutS low > 67
Pseudomonas lactucae CFBP13502 0.36 GEMAOFIL_05058 ATP-dependent RNA helicase HrpB 0.55 GEMAOFIL_01323 DNA mismatch repair protein MutS low > 93
Pseudomonas sp. SVBP6 0.36 COO64_RS15435 hrpB ATP-dependent helicase HrpB 0.56 COO64_RS19805 mutS DNA mismatch repair protein MutS low > 93
Pseudomonas sp. RS175 0.36 PFR28_03833 ATP-dependent RNA helicase HrpB 0.56 PFR28_00429 DNA mismatch repair protein MutS low > 88
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_1395 ATP-dependent helicase HrpB 0.55 PfGW456L13_4672 DNA mismatch repair protein MutS low > 87
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_15485 ATP-dependent helicase 0.56 AO356_05875 DNA mismatch repair protein MutS low > 104
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_06300 ATP-dependent helicase 0.56 AO353_16625 DNA mismatch repair protein MutS low > 101
Pseudomonas putida KT2440 0.35 PP_4772 ATP-dependent helicase HrpB 0.56 PP_1626 DNA mismatch repair protein MutS low > 96
Pseudomonas sp. BP01 0.35 JOY50_RS21795 hrpB ATP-dependent helicase HrpB 0.55 JOY50_RS23765 mutS DNA mismatch repair protein MutS low > 84
Pseudomonas sp. DMC3 0.35 GFF3915 ATP-dependent RNA helicase HrpB 0.55 GFF2086 DNA mismatch repair protein MutS low > 89
Shewanella loihica PV-4 0.35 Shew_3124 ATP-dependent helicase HrpB (RefSeq) 0.66 Shew_1214 DNA mismatch repair protein (RefSeq) low > 60
Pseudomonas segetis P6 0.35 MPMX49_01090 ATP-dependent RNA helicase HrpB 0.55 MPMX49_03425 DNA mismatch repair protein MutS low > 75
Rhizobium sp. OAE497 0.35 ABIE40_RS19515 ATP-dependent helicase HrpB 0.33 ABIE40_RS01775 DNA mismatch repair protein MutS low > 107
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2728 ATP-dependent helicase HrpB 0.55 Pf1N1B4_3117 DNA mismatch repair protein MutS low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_4320 ATP-dependent helicase HrpB 0.56 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_4320 ATP-dependent helicase HrpB 0.56 Psyr_1376 DNA mismatch repair protein MutS low > 86
Sinorhizobium meliloti 1021 0.35 SMc02586 ATP-dependent helicase 0.32 SMc01125 DNA mismatch repair protein MutS low > 103
Agrobacterium fabrum C58 0.35 Atu0052 helicase 0.33 Atu0345 DNA mismatch repair protein, MutS family low > 89
Echinicola vietnamensis KMM 6221, DSM 17526 0.34 Echvi_3452 ATP-dependent helicase HrpB 0.35 Echvi_0960 DNA mismatch repair protein MutS low > 79
Rhodopseudomonas palustris CGA009 0.34 TX73_002770 ATP-dependent helicase HrpB 0.33 TX73_002655 DNA mismatch repair protein MutS low > 86
Azospirillum sp. SherDot2 0.34 MPMX19_00095 ATP-dependent RNA helicase HrpB 0.32 MPMX19_00908 DNA mismatch repair protein MutS low > 112
Bosea sp. OAE506 0.33 ABIE41_RS03925 ATP-dependent helicase HrpB 0.30 ABIE41_RS03650 DNA mismatch repair protein MutS low > 77
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01243 ATP-dependent helicase hrpB 0.29 CCNA_00012 DNA mismatch repair protein MutS low > 67
Magnetospirillum magneticum AMB-1 0.33 AMB_RS06395 ATP-dependent helicase HrpB 0.32 AMB_RS01455 DNA mismatch repair protein MutS — —
Caulobacter crescentus NA1000 0.33 CCNA_01243 ATP-dependent helicase hrpB 0.29 CCNA_00012 DNA mismatch repair protein MutS low > 66
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS13060 ATP-dependent helicase HrpB 0.52 ABZR86_RS00630 DNA mismatch repair protein MutS low > 74
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_16270 hrpA HrpA-like RNA helicase 0.53 OKGIIK_03705 mutS DNA mismatch repair protein MutS low > 52
Rhodospirillum rubrum S1H 0.32 Rru_A2365 ATP-dependent helicase HrpB (NCBI) 0.33 Rru_A3541 MutS 1 protein (NCBI) low > 58
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS10015 ATP-dependent helicase HrpB 0.51 LRK54_RS14935 DNA mismatch repair protein MutS low > 59
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.354.1 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. 0.49 Xcc-8004.3760.1 DNA mismatch repair protein MutS low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU1543 hrpB ATP-dependent helicase HrpB (TIGR) 0.32 DVU1649 mutS DNA mismatch repair protein MutS (TIGR) low > 55
Lysobacter sp. OAE881 0.32 ABIE51_RS00675 ATP-dependent helicase HrpB 0.52 ABIE51_RS07785 DNA mismatch repair protein MutS low > 62
Rhodanobacter denitrificans MT42 0.32 LRK55_RS09655 ATP-dependent helicase HrpB 0.52 LRK55_RS14650 DNA mismatch repair protein MutS low > 63
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS05425 ATP-dependent helicase HrpB 0.28 A4249_RS12110 DNA mismatch repair protein MutS low > 48
Xanthobacter sp. DMC5 0.32 GFF3994 ATP-dependent RNA helicase HrpB 0.31 GFF3848 DNA mismatch repair protein MutS — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_03600 ATP-dependent helicase HrpB 0.34 CA264_18545 DNA mismatch repair protein MutS low > 74
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_0192 ATP-dependent helicase HrpB (RefSeq) 0.33 DvMF_0355 DNA mismatch repair protein MutS (RefSeq) low > 51
Phaeobacter inhibens DSM 17395 0.29 PGA1_c24190 ATP-dependent RNA helicase HrpB 0.32 PGA1_c35000 DNA mismatch repair protein MutS low > 62
Dinoroseobacter shibae DFL-12 0.29 Dshi_2580 ATP-dependent helicase HrpB (RefSeq) 0.33 Dshi_3466 DNA mismatch repair protein MutS (RefSeq) low > 64
Alteromonas macleodii MIT1002 0.28 MIT1002_00406 ATP-dependent RNA helicase HrpB 0.61 MIT1002_00953 DNA mismatch repair protein MutS low > 70
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_2125 ATP-dependent helicase HrpB 0.33 Ga0059261_3784 DNA mismatch repair protein MutS low > 68
Sphingobium sp. HT1-2 0.27 GFF1913 ATP-dependent helicase HrpB 0.30 GFF4191 DNA mismatch repair protein MutS low > 95
Rhodanobacter sp000427505 FW510-R12 0.27 LRK53_RS02785 ATP-dependent helicase HrpB 0.51 LRK53_RS13685 DNA mismatch repair protein MutS low > 59

Not shown: 0 genomes with orthologs for CSW01_03170 only; 35 genomes with orthologs for CSW01_02840 only