Conservation of cofitness between CSW01_04375 and CSW01_01120 in Vibrio cholerae E7946 ATCC 55056

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04375 SsrA-binding protein 1.0 CSW01_01120 orotate phosphoribosyltransferase 0.57 5
Escherichia coli ECOR38 0.72 HEPCGN_20245 smpB SsrA-binding protein SmpB 0.84 HEPCGN_14420 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli BW25113 0.72 b2620 smpB SsrA-binding protein (NCBI) 0.85 b3642 pyrE orotate phosphoribosyltransferase (NCBI) low > 76
Escherichia coli ECOR27 0.72 NOLOHH_12795 smpB SsrA-binding protein SmpB 0.84 NOLOHH_07480 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli ECRC98 0.72 JDDGAC_24790 smpB SsrA-binding protein SmpB 0.84 JDDGAC_19225 pyrE Orotate phosphoribosyltransferase low > 87
Escherichia coli Nissle 1917 0.72 ECOLIN_RS14795 SsrA-binding protein SmpB 0.85 ECOLIN_RS20750 orotate phosphoribosyltransferase — —
Escherichia coli ECRC62 0.72 BNILDI_11600 smpB SsrA-binding protein SmpB 0.85 BNILDI_04035 pyrE Orotate phosphoribosyltransferase low > 75
Escherichia coli ECRC101 0.72 MCAODC_11650 smpB SsrA-binding protein SmpB 0.84 MCAODC_06110 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli ECRC100 0.72 OKFHMN_21125 smpB SsrA-binding protein SmpB 0.84 OKFHMN_15600 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_01087 SsrA-binding protein 0.85 OHPLBJKB_00060 Orotate phosphoribosyltransferase low > 74
Escherichia coli ECRC102 0.72 NIAGMN_18895 smpB SsrA-binding protein SmpB 0.84 NIAGMN_13360 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli ECRC99 0.72 KEDOAH_07095 smpB SsrA-binding protein SmpB 0.84 KEDOAH_12550 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli BL21 0.72 ECD_02508 tmRNA-binding trans-translation protein 0.85 ECD_03499 orotate phosphoribosyltransferase low > 61
Escherichia fergusonii Becca 0.72 EFB2_01273 SsrA-binding protein 0.84 EFB2_00171 Orotate phosphoribosyltransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF4158 tmRNA-binding protein SmpB 0.84 GFF367 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 78
Enterobacter sp. TBS_079 0.70 MPMX20_03490 SsrA-binding protein 0.83 MPMX20_00093 Orotate phosphoribosyltransferase low > 85
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2723 SsrA-binding protein 0.83 EX28DRAFT_3892 orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Dickeya dadantii 3937 0.70 DDA3937_RS04305 SsrA-binding protein SmpB 0.83 DDA3937_RS20535 orotate phosphoribosyltransferase — —
Klebsiella pneumoniae MKP103 0.70 KDGMDA_02270 SsrA-binding protein SmpB 0.84 KDGMDA_08050 Orotate phosphoribosyltransferase low > 95
Dickeya dianthicola ME23 0.70 DZA65_RS04215 SsrA-binding protein SmpB 0.81 DZA65_RS00735 orotate phosphoribosyltransferase low > 75
Dickeya dianthicola 67-19 0.70 HGI48_RS04300 SsrA-binding protein SmpB 0.81 HGI48_RS00680 orotate phosphoribosyltransferase low > 71
Klebsiella michiganensis M5al 0.69 BWI76_RS21580 SsrA-binding protein 0.84 BWI76_RS27385 orotate phosphoribosyltransferase low > 92
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS14680 SsrA-binding protein SmpB 0.80 PagCFBP13505_RS18745 orotate phosphoribosyltransferase — —
Pantoea sp. MT58 0.68 IAI47_04790 SsrA-binding protein SmpB 0.80 IAI47_00600 orotate phosphoribosyltransferase — —
Erwinia tracheiphila HP pepo 2.2 0.68 IJEDHG_26965 smpB SsrA-binding protein SmpB 0.80 IJEDHG_07760 pyrE orotate phosphoribosyltransferase — —
Erwinia tracheiphila SCR3 0.68 LU632_RS17025 smpB SsrA-binding protein SmpB 0.80 LU632_RS22015 pyrE orotate phosphoribosyltransferase — —
Rahnella sp. WP5 0.68 EX31_RS21740 SsrA-binding protein SmpB 0.81 EX31_RS14500 orotate phosphoribosyltransferase — —
Pectobacterium carotovorum WPP14 0.67 HER17_RS17440 SsrA-binding protein SmpB 0.82 HER17_RS20850 orotate phosphoribosyltransferase low > 75
Erwinia amylovora T8 0.67 OLJFJH_10155 SsrA-binding protein SmpB 0.81 OLJFJH_05770 orotate phosphoribosyltransferase — —
Serratia liquefaciens MT49 0.63 IAI46_19655 SsrA-binding protein SmpB 0.81 IAI46_24845 orotate phosphoribosyltransferase low > 86
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_0969 SsrA-binding protein 0.67 B158DRAFT_0786 orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Alteromonas macleodii MIT1002 0.59 MIT1002_01806 Small protein B 0.77 MIT1002_04070 Orotate phosphoribosyltransferase — —
Shewanella sp. ANA-3 0.57 Shewana3_2952 smpB SsrA-binding protein (RefSeq) 0.83 Shewana3_3776 pyrE orotate phosphoribosyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.57 SO1473 smpB SsrA-binding protein (NCBI ptt file) 0.83 SO4255 pyrE orotate phosphoribosyltransferase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.55 Sama_2388 smpB SsrA-binding protein (RefSeq) 0.84 Sama_0321 pyrE orotate phosphoribosyltransferase (RefSeq) — —
Shewanella loihica PV-4 0.55 Shew_1268 smpB SsrA-binding protein (RefSeq) 0.84 Shew_3487 pyrE orotate phosphoribosyltransferase (RefSeq) — —
Marinobacter adhaerens HP15 0.55 HP15_3090 SsrA-binding protein 0.63 HP15_298 orotate phosphoribosyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.3437.1 tmRNA-binding protein SmpB 0.45 Xcc-8004.4884.1 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Acinetobacter baumannii LAC-4 0.54 RR41_RS15055 SsrA-binding protein SmpB 0.53 RR41_RS00800 orotate phosphoribosyltransferase — —
Acinetobacter radioresistens SK82 0.54 MPMX26_00737 SsrA-binding protein 0.53 MPMX26_02937 Orotate phosphoribosyltransferase low > 36
Lysobacter sp. OAE881 0.53 ABIE51_RS11680 SsrA-binding protein SmpB 0.44 ABIE51_RS00065 orotate phosphoribosyltransferase low > 62
Pseudomonas sp. S08-1 0.53 OH686_17025 SsrA-binding protein 0.70 OH686_13590 Orotate phosphoribosyltransferase low > 80
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS05700 SsrA-binding protein SmpB 0.58 ABZR86_RS15640 orotate phosphoribosyltransferase 0.33 72
Pseudomonas sp. SVBP6 0.52 COO64_RS15300 smpB SsrA-binding protein SmpB 0.69 COO64_RS01495 pyrE orotate phosphoribosyltransferase low > 93
Pseudomonas stutzeri RCH2 0.52 Psest_0957 SsrA-binding protein 0.71 Psest_3810 orotate phosphoribosyltransferase — —
Pseudomonas sp. BP01 0.52 JOY50_RS26715 smpB SsrA-binding protein SmpB 0.68 JOY50_RS09035 pyrE orotate phosphoribosyltransferase low > 84
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_05690 SsrA-binding protein 0.67 AO353_09245 orotate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_07540 SsrA-binding protein 0.67 AO356_12520 orotate phosphoribosyltransferase low > 104
Pseudomonas aeruginosa PA14 0.51 IKLFDK_29750 SsrA-binding protein SmpB 0.69 IKLFDK_26800 Orotate phosphoribosyltransferase 0.71 47
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_3378 tmRNA-binding protein SmpB 0.68 Pf6N2E2_4370 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Pseudomonas segetis P6 0.51 MPMX49_01175 SsrA-binding protein 0.68 MPMX49_00027 Orotate phosphoribosyltransferase — —
Pseudomonas putida KT2440 0.51 PP_4733 SsrA-binding protein 0.68 PP_5291 Orotate phosphoribosyltransferase — —
Dechlorosoma suillum PS 0.51 Dsui_2675 SsrA-binding protein 0.57 Dsui_0873 orotate phosphoribosyltransferase — —
Pseudomonas sp. RS175 0.50 PFR28_00065 SsrA-binding protein 0.71 PFR28_04417 Orotate phosphoribosyltransferase — —
Rhodanobacter sp000427505 FW510-R12 0.50 LRK53_RS11435 SsrA-binding protein SmpB 0.57 LRK53_RS17885 orotate phosphoribosyltransferase — —
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_07375 smpB SsrA-binding protein SmpB 0.56 OKGIIK_15685 pyrE orotate phosphoribosyltransferase low > 53
Rhodanobacter denitrificans MT42 0.50 LRK55_RS17780 SsrA-binding protein SmpB 0.56 LRK55_RS08720 orotate phosphoribosyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS17925 SsrA-binding protein SmpB 0.56 LRK54_RS09190 orotate phosphoribosyltransferase — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS17000 SsrA-binding protein SmpB 0.50 RPSI07_RS23295 orotate phosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.49 RS_RS07145 SsrA-binding protein 0.50 RS_RS00685 orotate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_4203 SsrA-binding protein 0.72 Psyr_0216 orotate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_4203 SsrA-binding protein 0.72 Psyr_0216 orotate phosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.49 UW163_RS13820 SsrA-binding protein SmpB 0.51 UW163_RS03505 orotate phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS00490 SsrA-binding protein SmpB 0.51 RALBFv3_RS10075 orotate phosphoribosyltransferase — —
Pseudomonas sp. DMC3 0.48 GFF4965 SsrA-binding protein 0.67 GFF411 Orotate phosphoribosyltransferase low > 89
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_1184 tmRNA-binding protein SmpB 0.66 Pf1N1B4_2120 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS11940 SsrA-binding protein SmpB 0.51 ABZR87_RS05590 orotate phosphoribosyltransferase low > 80
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS11775 single-stranded DNA-binding protein 0.54 RR42_RS01225 orotate phosphoribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_5112 tmRNA-binding protein SmpB 0.67 PfGW456L13_788 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Methylophilus sp. DMC18 0.48 GFF1142 SsrA-binding protein 0.55 GFF2065 Orotate phosphoribosyltransferase — —
Castellaniella sp019104865 MT123 0.47 ABCV34_RS04010 SsrA-binding protein SmpB 0.56 ABCV34_RS10890 orotate phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS25935 SsrA-binding protein SmpB 0.67 PFLU_RS29475 orotate phosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.47 PS417_24095 SsrA-binding protein 0.67 PS417_27795 orotate phosphoribosyltransferase — —
Pseudomonas lactucae CFBP13502 0.47 GEMAOFIL_04969 SsrA-binding protein 0.67 GEMAOFIL_00027 Orotate phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.47 PFLU_RS25935 SsrA-binding protein SmpB 0.67 PFLU_RS29475 orotate phosphoribosyltransferase — —
Variovorax sp. OAS795 0.47 ABID97_RS16435 SsrA-binding protein SmpB 0.50 ABID97_RS03910 orotate phosphoribosyltransferase low > 91
Variovorax sp. SCN45 0.46 GFF213 tmRNA-binding protein SmpB 0.50 GFF5065 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 127
Acidovorax sp. GW101-3H11 0.44 Ac3H11_2861 tmRNA-binding protein SmpB 0.52 Ac3H11_3341 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS11000 single-stranded DNA-binding protein 0.53 HSERO_RS23380 orotate phosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF4352 tmRNA-binding protein SmpB 0.50 GFF1882 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Bifidobacterium breve UCC2003 0.33 BBR_RS13045 SsrA-binding protein 0.41 BBR_RS15455 orotate phosphoribosyltransferase — —

Not shown: 38 genomes with orthologs for CSW01_04375 only; 0 genomes with orthologs for CSW01_01120 only