Conservation of cofitness between CSW01_03090 and CSW01_01120 in Vibrio cholerae E7946 ATCC 55056

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03090 rRNA (cytidine-2'-O-)-methyltransferase 1.0 CSW01_01120 orotate phosphoribosyltransferase 0.71 6
Pectobacterium carotovorum WPP14 0.65 HER17_RS19860 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.82 HER17_RS20850 orotate phosphoribosyltransferase low > 75
Erwinia amylovora T8 0.65 OLJFJH_02280 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.81 OLJFJH_05770 orotate phosphoribosyltransferase low > 58
Escherichia coli ECOR38 0.64 HEPCGN_17110 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.84 HEPCGN_14420 pyrE Orotate phosphoribosyltransferase low > 88
Escherichia fergusonii Becca 0.64 EFB2_00677 Ribosomal RNA small subunit methyltransferase I 0.84 EFB2_00171 Orotate phosphoribosyltransferase low > 86
Escherichia coli Nissle 1917 0.64 ECOLIN_RS18085 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.85 ECOLIN_RS20750 orotate phosphoribosyltransferase low > 55
Escherichia coli ECRC99 0.64 KEDOAH_09915 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.84 KEDOAH_12550 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli BL21 0.64 ECD_03013 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent 0.85 ECD_03499 orotate phosphoribosyltransferase low > 61
Escherichia coli ECRC100 0.64 OKFHMN_18235 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.84 OKFHMN_15600 pyrE Orotate phosphoribosyltransferase low > 79
Dickeya dadantii 3937 0.64 DDA3937_RS01715 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.83 DDA3937_RS20535 orotate phosphoribosyltransferase low > 74
Escherichia coli BW25113 0.64 b3146 yraL predicted methyltransferase (NCBI) 0.85 b3642 pyrE orotate phosphoribosyltransferase (NCBI) low > 76
Escherichia coli ECRC102 0.64 NIAGMN_15995 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.84 NIAGMN_13360 pyrE Orotate phosphoribosyltransferase low > 80
Escherichia coli ECRC98 0.64 JDDGAC_21860 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.84 JDDGAC_19225 pyrE Orotate phosphoribosyltransferase low > 87
Escherichia coli ECRC101 0.64 MCAODC_08755 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.84 MCAODC_06110 pyrE Orotate phosphoribosyltransferase low > 88
Dickeya dianthicola 67-19 0.64 HGI48_RS01610 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.81 HGI48_RS00680 orotate phosphoribosyltransferase low > 71
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00555 Ribosomal RNA small subunit methyltransferase I 0.85 OHPLBJKB_00060 Orotate phosphoribosyltransferase low > 74
Erwinia tracheiphila SCR3 0.64 LU632_RS02230 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.80 LU632_RS22015 pyrE orotate phosphoribosyltransferase low > 74
Shewanella loihica PV-4 0.63 Shew_0228 uroporphyrin-III C/tetrapyrrole methyltransferase (RefSeq) 0.84 Shew_3487 pyrE orotate phosphoribosyltransferase (RefSeq) low > 60
Erwinia tracheiphila HP pepo 2.2 0.63 IJEDHG_06680 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.80 IJEDHG_07760 pyrE orotate phosphoribosyltransferase low > 61
Dickeya dianthicola ME23 0.63 DZA65_RS01685 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.81 DZA65_RS00735 orotate phosphoribosyltransferase low > 75
Escherichia coli ECRC62 0.63 BNILDI_01495 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.85 BNILDI_04035 pyrE Orotate phosphoribosyltransferase low > 75
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13505_RS11450 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.80 PagCFBP13505_RS18745 orotate phosphoribosyltransferase low > 74
Escherichia coli ECOR27 0.63 NOLOHH_10035 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.84 NOLOHH_07480 pyrE Orotate phosphoribosyltransferase low > 76
Shewanella oneidensis MR-1 0.63 SO0301 hypothetical methyltransferase (NCBI ptt file) 0.83 SO4255 pyrE orotate phosphoribosyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.62 Shewana3_3879 hypothetical protein (RefSeq) 0.83 Shewana3_3776 pyrE orotate phosphoribosyltransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.62 Sama_3353 hypothetical protein (RefSeq) 0.84 Sama_0321 pyrE orotate phosphoribosyltransferase (RefSeq) low > 62
Enterobacter asburiae PDN3 0.61 EX28DRAFT_3195 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.83 EX28DRAFT_3892 orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Enterobacter sp. TBS_079 0.61 MPMX20_04050 Ribosomal RNA small subunit methyltransferase I 0.83 MPMX20_00093 Orotate phosphoribosyltransferase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF1521 rRNA small subunit methyltransferase I 0.84 GFF367 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 78
Rahnella sp. WP5 0.61 EX31_RS12550 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.81 EX31_RS14500 orotate phosphoribosyltransferase low > 89
Pantoea sp. MT58 0.61 IAI47_02850 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.80 IAI47_00600 orotate phosphoribosyltransferase low > 76
Klebsiella michiganensis M5al 0.60 BWI76_RS24910 rRNA (cytidine-2'-O-)-methyltransferase 0.84 BWI76_RS27385 orotate phosphoribosyltransferase low > 92
Serratia liquefaciens MT49 0.59 IAI46_22295 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.81 IAI46_24845 orotate phosphoribosyltransferase low > 86
Klebsiella pneumoniae MKP103 0.58 KDGMDA_05780 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.84 KDGMDA_08050 Orotate phosphoribosyltransferase low > 95
Pseudomonas segetis P6 0.56 MPMX49_03819 Ribosomal RNA small subunit methyltransferase I 0.68 MPMX49_00027 Orotate phosphoribosyltransferase — —
Pseudomonas sp. SVBP6 0.54 COO64_RS11845 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.69 COO64_RS01495 pyrE orotate phosphoribosyltransferase low > 93
Pseudomonas sp. DMC3 0.54 GFF4428 Ribosomal RNA small subunit methyltransferase I 0.67 GFF411 Orotate phosphoribosyltransferase low > 89
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5346 rRNA small subunit methyltransferase I 0.68 Pf6N2E2_4370 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Pseudomonas lactucae CFBP13502 0.53 GEMAOFIL_01121 Ribosomal RNA small subunit methyltransferase I 0.67 GEMAOFIL_00027 Orotate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_17110 methyltransferase 0.67 AO356_12520 orotate phosphoribosyltransferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_15290 methyltransferase 0.67 AO353_09245 orotate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_4112 Protein of unknown function UPF0011 0.72 Psyr_0216 orotate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_4112 Protein of unknown function UPF0011 0.72 Psyr_0216 orotate phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.67 PFLU_RS29475 orotate phosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.53 PS417_04590 methyltransferase 0.67 PS417_27795 orotate phosphoribosyltransferase low > 88
Pseudomonas sp. RS175 0.53 PFR28_03597 Ribosomal RNA small subunit methyltransferase I 0.71 PFR28_04417 Orotate phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.53 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.67 PFLU_RS29475 orotate phosphoribosyltransferase — —
Pseudomonas stutzeri RCH2 0.52 Psest_3270 probable S-adenosylmethionine-dependent methyltransferase, YraL family 0.71 Psest_3810 orotate phosphoribosyltransferase low > 67
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_953 rRNA small subunit methyltransferase I 0.66 Pf1N1B4_2120 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Pseudomonas putida KT2440 0.52 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase 0.68 PP_5291 Orotate phosphoribosyltransferase — —
Pseudomonas sp. BP01 0.52 JOY50_RS15165 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.68 JOY50_RS09035 pyrE orotate phosphoribosyltransferase low > 84
Pseudomonas sp. S08-1 0.51 OH686_08340 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.70 OH686_13590 Orotate phosphoribosyltransferase low > 80
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_1643 rRNA small subunit methyltransferase I 0.67 PfGW456L13_788 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Pseudomonas aeruginosa PA14 0.50 IKLFDK_01980 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.69 IKLFDK_26800 Orotate phosphoribosyltransferase — —
Methylophilus sp. DMC18 0.49 GFF2450 Ribosomal RNA small subunit methyltransferase I 0.55 GFF2065 Orotate phosphoribosyltransferase — —
Alteromonas macleodii MIT1002 0.49 MIT1002_03113 Ribosomal RNA small subunit methyltransferase I 0.77 MIT1002_04070 Orotate phosphoribosyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS11380 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.58 ABZR86_RS15640 orotate phosphoribosyltransferase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4371.1 rRNA small subunit methyltransferase I 0.45 Xcc-8004.4884.1 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 74
Marinobacter adhaerens HP15 0.46 HP15_554 tetrapyrrole methylase family protein 0.63 HP15_298 orotate phosphoribosyltransferase low > 73
Rhodanobacter denitrificans MT42 0.45 LRK55_RS11925 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.56 LRK55_RS08720 orotate phosphoribosyltransferase low > 63
Dechlorosoma suillum PS 0.45 Dsui_0251 putative S-adenosylmethionine-dependent methyltransferase, YraL family 0.57 Dsui_0873 orotate phosphoribosyltransferase — —
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_2109 probable S-adenosylmethionine-dependent methyltransferase, YraL family 0.67 B158DRAFT_0786 orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Rhodanobacter sp000427505 FW510-R12 0.45 LRK53_RS16300 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.57 LRK53_RS17885 orotate phosphoribosyltransferase low > 59
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS12190 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.56 LRK54_RS09190 orotate phosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS23345 16S rRNA methyltransferase 0.53 HSERO_RS23380 orotate phosphoribosyltransferase — —
Lysobacter sp. OAE881 0.44 ABIE51_RS04695 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.44 ABIE51_RS00065 orotate phosphoribosyltransferase 0.48 45
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_11735 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.56 OKGIIK_15685 pyrE orotate phosphoribosyltransferase — —
Acinetobacter baumannii LAC-4 0.44 RR41_RS09275 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.53 RR41_RS00800 orotate phosphoribosyltransferase — —
Acinetobacter radioresistens SK82 0.44 MPMX26_02282 Ribosomal RNA small subunit methyltransferase I 0.53 MPMX26_02937 Orotate phosphoribosyltransferase low > 36
Castellaniella sp019104865 MT123 0.38 ABCV34_RS14320 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.56 ABCV34_RS10890 orotate phosphoribosyltransferase — —
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS19740 16S rRNA methyltransferase 0.54 RR42_RS01225 orotate phosphoribosyltransferase — —
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4466 rRNA small subunit methyltransferase I 0.52 Ac3H11_3341 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Ralstonia solanacearum UW163 0.34 UW163_RS05115 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.51 UW163_RS03505 orotate phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS08495 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.51 RALBFv3_RS10075 orotate phosphoribosyltransferase — —
Ralstonia solanacearum PSI07 0.33 RPSI07_RS08730 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.50 RPSI07_RS23295 orotate phosphoribosyltransferase — —
Variovorax sp. OAS795 0.33 ABID97_RS00285 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.50 ABID97_RS03910 orotate phosphoribosyltransferase low > 91
Variovorax sp. SCN45 0.33 GFF3735 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (EC 2.1.1.198) 0.50 GFF5065 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 127
Ralstonia solanacearum GMI1000 0.33 RS_RS16360 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.50 RS_RS00685 orotate phosphoribosyltransferase — —
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS03815 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.51 ABZR87_RS05590 orotate phosphoribosyltransferase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF2715 rRNA small subunit methyltransferase I 0.50 GFF1882 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 90
Bifidobacterium breve UCC2003 0.32 BBR_RS19915 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.41 BBR_RS15455 orotate phosphoribosyltransferase low > 34

Not shown: 22 genomes with orthologs for CSW01_03090 only; 0 genomes with orthologs for CSW01_01120 only