Conservation of cofitness between CSW01_01045 and CSW01_01120 in Vibrio cholerae E7946 ATCC 55056

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01045 DNA helicase RecQ 1.0 CSW01_01120 orotate phosphoribosyltransferase 0.80 2
Klebsiella pneumoniae MKP103 0.67 KDGMDA_09735 ATP-dependent DNA helicase RecQ 0.84 KDGMDA_08050 Orotate phosphoribosyltransferase low > 95
Escherichia coli ECOR38 0.67 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ 0.84 HEPCGN_14420 pyrE Orotate phosphoribosyltransferase low > 88
Escherichia coli ECRC99 0.67 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ 0.84 KEDOAH_12550 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli ECRC101 0.67 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ 0.84 MCAODC_06110 pyrE Orotate phosphoribosyltransferase low > 87
Escherichia coli ECRC100 0.67 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ 0.84 OKFHMN_15600 pyrE Orotate phosphoribosyltransferase low > 79
Escherichia coli ECRC98 0.67 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ 0.84 JDDGAC_19225 pyrE Orotate phosphoribosyltransferase low > 87
Escherichia coli ECRC102 0.67 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ 0.84 NIAGMN_13360 pyrE Orotate phosphoribosyltransferase low > 80
Escherichia coli ECRC62 0.67 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ 0.85 BNILDI_04035 pyrE Orotate phosphoribosyltransferase low > 75
Escherichia coli ECOR27 0.67 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ 0.84 NOLOHH_07480 pyrE Orotate phosphoribosyltransferase low > 76
Escherichia coli Nissle 1917 0.67 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ 0.85 ECOLIN_RS20750 orotate phosphoribosyltransferase low > 55
Escherichia coli BW25113 0.67 b3822 recQ ATP-dependent DNA helicase (NCBI) 0.85 b3642 pyrE orotate phosphoribosyltransferase (NCBI) low > 76
Escherichia fergusonii Becca 0.67 EFB2_04815 ATP-dependent DNA helicase RecQ 0.84 EFB2_00171 Orotate phosphoribosyltransferase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ 0.85 OHPLBJKB_00060 Orotate phosphoribosyltransferase low > 74
Pantoea sp. MT58 0.67 IAI47_18360 ATP-dependent DNA helicase RecQ 0.80 IAI47_00600 orotate phosphoribosyltransferase low > 76
Escherichia coli BL21 0.66 ECD_03701 ATP-dependent DNA helicase 0.85 ECD_03499 orotate phosphoribosyltransferase low > 61
Klebsiella michiganensis M5al 0.66 BWI76_RS01245 DNA helicase RecQ 0.84 BWI76_RS27385 orotate phosphoribosyltransferase low > 92
Serratia liquefaciens MT49 0.66 IAI46_00770 ATP-dependent DNA helicase RecQ 0.81 IAI46_24845 orotate phosphoribosyltransferase low > 87
Dickeya dianthicola 67-19 0.66 HGI48_RS20005 ATP-dependent DNA helicase RecQ 0.81 HGI48_RS00680 orotate phosphoribosyltransferase low > 71
Erwinia tracheiphila SCR3 0.66 LU632_RS24095 recQ ATP-dependent DNA helicase RecQ 0.80 LU632_RS22015 pyrE orotate phosphoribosyltransferase low > 73
Pantoea agglomerans CFBP13505 P0401 0.66 PagCFBP13505_RS15340 ATP-dependent DNA helicase RecQ 0.80 PagCFBP13505_RS18745 orotate phosphoribosyltransferase low > 74
Erwinia amylovora T8 0.66 OLJFJH_06445 ATP-dependent DNA helicase RecQ 0.81 OLJFJH_05770 orotate phosphoribosyltransferase low > 58
Dickeya dianthicola ME23 0.66 DZA65_RS21045 ATP-dependent DNA helicase RecQ 0.81 DZA65_RS00735 orotate phosphoribosyltransferase low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS19850 ATP-dependent DNA helicase RecQ 0.83 DDA3937_RS20535 orotate phosphoribosyltransferase low > 74
Erwinia tracheiphila HP pepo 2.2 0.66 IJEDHG_08740 recQ ATP-dependent DNA helicase RecQ 0.80 IJEDHG_07760 pyrE orotate phosphoribosyltransferase low > 61
Enterobacter asburiae PDN3 0.66 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ 0.83 EX28DRAFT_3892 orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Enterobacter sp. TBS_079 0.66 MPMX20_04458 ATP-dependent DNA helicase RecQ 0.83 MPMX20_00093 Orotate phosphoribosyltransferase low > 85
Rahnella sp. WP5 0.65 EX31_RS15210 ATP-dependent DNA helicase RecQ 0.81 EX31_RS14500 orotate phosphoribosyltransferase low > 89
Pectobacterium carotovorum WPP14 0.65 HER17_RS01395 ATP-dependent DNA helicase RecQ 0.82 HER17_RS20850 orotate phosphoribosyltransferase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF248 ATP-dependent DNA helicase RecQ 0.84 GFF367 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 78
Shewanella sp. ANA-3 0.59 Shewana3_3763 ATP-dependent DNA helicase RecQ (RefSeq) 0.83 Shewana3_3776 pyrE orotate phosphoribosyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) 0.83 SO4255 pyrE orotate phosphoribosyltransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.58 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) 0.84 Shew_3487 pyrE orotate phosphoribosyltransferase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.57 Sama_0333 ATP-dependent DNA helicase RecQ (RefSeq) 0.84 Sama_0321 pyrE orotate phosphoribosyltransferase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.54 MIT1002_00148 ATP-dependent DNA helicase RecQ 0.77 MIT1002_04070 Orotate phosphoribosyltransferase — —
Pseudomonas sp. SVBP6 0.46 COO64_RS21845 recQ DNA helicase RecQ 0.69 COO64_RS01495 pyrE orotate phosphoribosyltransferase low > 93
Pseudomonas aeruginosa MRSN321 0.45 DY961_RS00140 recQ;go_function=DNA DNA helicase RecQ 0.69 DY961_RS12545 pyrE;go_function=orotate orotate phosphoribosyltransferase 0.60 39
Pseudomonas aeruginosa PA14 0.45 IKLFDK_17145 DNA helicase RecQ 0.69 IKLFDK_26800 Orotate phosphoribosyltransferase low > 98
Pseudomonas aeruginosa PUPa3 0.45 DQ20_RS40870 recQ;go_function=DNA DNA helicase RecQ 0.69 DQ20_RS49580 pyrE;go_function=orotate orotate phosphoribosyltransferase low > 101
Pseudomonas sp. RS175 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ 0.71 PFR28_04417 Orotate phosphoribosyltransferase — —
Marinobacter adhaerens HP15 0.45 HP15_1718 ATP-dependent DNA helicase RecQ 0.63 HP15_298 orotate phosphoribosyltransferase low > 73
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4423 ATP-dependent DNA helicase RecQ 0.67 PfGW456L13_788 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS19925 DNA helicase RecQ 0.58 ABZR86_RS15640 orotate phosphoribosyltransferase low > 74
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_04050 ATP-dependent DNA helicase RecQ 0.67 AO356_12520 orotate phosphoribosyltransferase low > 104
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS13000 DNA helicase RecQ 0.56 LRK54_RS09190 orotate phosphoribosyltransferase — —
Pseudomonas sp. S08-1 0.45 OH686_20670 ATP-dependent DNA helicase RecQ 0.70 OH686_13590 Orotate phosphoribosyltransferase low > 80
Pseudomonas segetis P6 0.45 MPMX49_02936 ATP-dependent DNA helicase RecQ 0.68 MPMX49_00027 Orotate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ 0.68 Pf6N2E2_4370 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Rhodanobacter denitrificans MT42 0.45 LRK55_RS12700 DNA helicase RecQ 0.56 LRK55_RS08720 orotate phosphoribosyltransferase low > 63
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ 0.66 Pf1N1B4_2120 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Pseudomonas sp. DMC3 0.44 GFF2380 ATP-dependent DNA helicase RecQ 0.67 GFF411 Orotate phosphoribosyltransferase low > 89
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.72 Psyr_0216 orotate phosphoribosyltransferase — —
Pseudomonas sp. BP01 0.44 JOY50_RS01155 recQ DNA helicase RecQ 0.68 JOY50_RS09035 pyrE orotate phosphoribosyltransferase low > 84
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.72 Psyr_0216 orotate phosphoribosyltransferase — —
Pseudomonas putida KT2440 0.44 PP_4516 ATP-dependent DNA 3 0.68 PP_5291 Orotate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_18430 ATP-dependent DNA helicase RecQ 0.67 AO353_09245 orotate phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS21920 DNA helicase RecQ 0.67 PFLU_RS29475 orotate phosphoribosyltransferase — —
Pseudomonas lactucae CFBP13502 0.44 GEMAOFIL_04187 ATP-dependent DNA helicase RecQ 0.67 GEMAOFIL_00027 Orotate phosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.44 PS417_19950 ATP-dependent DNA helicase RecQ 0.67 PS417_27795 orotate phosphoribosyltransferase low > 88
Variovorax sp. OAS795 0.44 ABID97_RS03395 DNA helicase RecQ 0.50 ABID97_RS03910 orotate phosphoribosyltransferase low > 91
Pseudomonas fluorescens SBW25 0.44 PFLU_RS21920 DNA helicase RecQ 0.67 PFLU_RS29475 orotate phosphoribosyltransferase — —
Pseudomonas orientalis W4I3 0.44 QF045_RS22070 DNA helicase RecQ 0.67 QF045_RS02150 orotate phosphoribosyltransferase — —
Rhodanobacter sp000427505 FW510-R12 0.44 LRK53_RS15600 DNA helicase RecQ 0.57 LRK53_RS17885 orotate phosphoribosyltransferase low > 59
Pseudomonas stutzeri RCH2 0.44 Psest_1869 ATP-dependent DNA helicase RecQ 0.71 Psest_3810 orotate phosphoribosyltransferase low > 67
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_02375 recQ DNA helicase RecQ 0.56 OKGIIK_15685 pyrE orotate phosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS02465 ATP-dependent DNA helicase RecQ 0.53 HSERO_RS23380 orotate phosphoribosyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1476.1 ATP-dependent DNA helicase RecQ 0.45 Xcc-8004.4884.1 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 74
Methylophilus sp. DMC18 0.43 GFF2139 ATP-dependent DNA helicase RecQ 0.55 GFF2065 Orotate phosphoribosyltransferase — —
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS02880 DNA helicase RecQ 0.51 ABZR87_RS05590 orotate phosphoribosyltransferase low > 80
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS19310 ATP-dependent DNA helicase RecQ 0.54 RR42_RS01225 orotate phosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.42 RS_RS15155 DNA helicase RecQ 0.50 RS_RS00685 orotate phosphoribosyltransferase — —
Ralstonia solanacearum PSI07 0.42 RPSI07_RS10025 DNA helicase RecQ 0.50 RPSI07_RS23295 orotate phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS07220 DNA helicase RecQ 0.51 RALBFv3_RS10075 orotate phosphoribosyltransferase — —
Dechlorosoma suillum PS 0.42 Dsui_3092 ATP-dependent DNA helicase RecQ 0.57 Dsui_0873 orotate phosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.42 UW163_RS06400 DNA helicase RecQ 0.51 UW163_RS03505 orotate phosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF1958 ATP-dependent DNA helicase RecQ 0.50 GFF1882 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 90
Lysobacter sp. OAE881 0.42 ABIE51_RS05145 DNA helicase RecQ 0.44 ABIE51_RS00065 orotate phosphoribosyltransferase low > 62
Variovorax sp. SCN45 0.42 GFF6415 ATP-dependent DNA helicase RecQ 0.50 GFF5065 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 127
Acidovorax sp. GW101-3H11 0.41 Ac3H11_3308 ATP-dependent DNA helicase RecQ 0.52 Ac3H11_3341 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 79
Castellaniella sp019104865 MT123 0.40 ABCV34_RS07985 DNA helicase RecQ 0.56 ABCV34_RS10890 orotate phosphoribosyltransferase — —
Bifidobacterium breve UCC2003 0.32 BBR_RS13150 DNA helicase RecQ 0.41 BBR_RS15455 orotate phosphoribosyltransferase low > 34

Not shown: 33 genomes with orthologs for CSW01_01045 only; 3 genomes with orthologs for CSW01_01120 only