Conservation of cofitness between CSW01_12240 and CSW01_01010 in Vibrio cholerae E7946 ATCC 55056

86 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12240 single-stranded-DNA-specific exonuclease RecJ 1.0 CSW01_01010 oligopeptidase A 0.64 5
Pantoea sp. MT58 0.64 IAI47_03830 single-stranded-DNA-specific exonuclease RecJ 0.72 IAI47_01345 oligopeptidase A low > 76
Escherichia coli ECRC62 0.64 BNILDI_10035 recJ single-stranded-DNA-specific exonuclease RecJ 0.72 BNILDI_03210 prlC oligopeptidase A low > 75
Escherichia coli BL21 0.64 ECD_02724 ssDNA exonuclease, 5 0.72 ECD_03347 oligopeptidase A low > 61
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13516_RS04060 recJ single-stranded-DNA-specific exonuclease RecJ 0.72 PagCFBP13516_RS01335 prlC oligopeptidase A low > 80
Escherichia coli ECOR27 0.64 NOLOHH_11505 recJ single-stranded-DNA-specific exonuclease RecJ 0.72 NOLOHH_08350 prlC oligopeptidase A low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00823 Single-stranded-DNA-specific exonuclease RecJ 0.72 OHPLBJKB_00205 Oligopeptidase A low > 74
Serratia liquefaciens MT49 0.64 IAI46_20720 single-stranded-DNA-specific exonuclease RecJ 0.71 IAI46_24210 oligopeptidase A low > 87
Escherichia coli ECRC99 0.64 KEDOAH_08560 recJ single-stranded-DNA-specific exonuclease RecJ 0.72 KEDOAH_11730 prlC oligopeptidase A — —
Escherichia coli ECRC101 0.64 MCAODC_10100 recJ single-stranded-DNA-specific exonuclease RecJ 0.72 MCAODC_06930 prlC oligopeptidase A low > 87
Escherichia coli ECRC100 0.64 OKFHMN_19580 recJ single-stranded-DNA-specific exonuclease RecJ 0.72 OKFHMN_16415 prlC oligopeptidase A low > 79
Escherichia coli ECRC98 0.64 JDDGAC_23220 recJ single-stranded-DNA-specific exonuclease RecJ 0.72 JDDGAC_20045 prlC oligopeptidase A low > 87
Escherichia coli ECRC102 0.64 NIAGMN_17345 recJ single-stranded-DNA-specific exonuclease RecJ 0.72 NIAGMN_14180 prlC oligopeptidase A 0.58 26
Escherichia fergusonii Becca 0.64 EFB2_01009 Single-stranded-DNA-specific exonuclease RecJ 0.72 EFB2_00317 Oligopeptidase A low > 86
Escherichia coli BW25113 0.63 b2892 recJ ssDNA exonuclease, 5' --> 3'-specific (NCBI) 0.72 b3498 prlC oligopeptidase A (NCBI) low > 76
Dickeya dadantii 3937 0.63 DDA3937_RS03310 single-stranded-DNA-specific exonuclease RecJ 0.72 DDA3937_RS21265 oligopeptidase A low > 74
Escherichia coli ECOR38 0.63 HEPCGN_18870 recJ single-stranded-DNA-specific exonuclease RecJ 0.72 HEPCGN_15325 prlC oligopeptidase A low > 88
Dickeya dianthicola ME23 0.63 DZA65_RS03495 single-stranded-DNA-specific exonuclease RecJ 0.71 DZA65_RS00035 oligopeptidase A low > 75
Dickeya dianthicola 67-19 0.63 HGI48_RS03450 single-stranded-DNA-specific exonuclease RecJ 0.70 HGI48_RS00045 oligopeptidase A low > 71
Escherichia coli Nissle 1917 0.63 ECOLIN_RS16115 single-stranded-DNA-specific exonuclease RecJ 0.72 ECOLIN_RS19985 oligopeptidase A low > 55
Klebsiella pneumoniae MRSN742743 0.63 GJGHJB_00785 recJ single-stranded-DNA-specific exonuclease RecJ 0.73 GJGHJB_00253 prlC oligopeptidase A low > 83
Klebsiella pneumoniae MKP103 0.63 KDGMDA_04290 single-stranded-DNA-specific exonuclease RecJ 0.73 KDGMDA_07425 oligopeptidase A low > 94
Enterobacter asburiae PDN3 0.63 EX28DRAFT_2943 single-stranded-DNA-specific exonuclease RecJ 0.72 EX28DRAFT_4063 Zn-dependent oligopeptidases low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF2989 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.72 GFF517 Oligopeptidase A (EC 3.4.24.70) low > 78
Rahnella sp. WP5 0.62 EX31_RS13470 single-stranded-DNA-specific exonuclease RecJ 0.70 EX31_RS05165 oligopeptidase A low > 89
Erwinia amylovora T8 0.62 OLJFJH_08845 single-stranded-DNA-specific exonuclease RecJ 0.71 OLJFJH_04530 Oligopeptidase A low > 58
Enterobacter sp. TBS_079 0.62 MPMX20_03751 Single-stranded-DNA-specific exonuclease RecJ 0.72 MPMX20_04397 Oligopeptidase A low > 85
Erwinia tracheiphila SCR3 0.62 LU632_RS05985 recJ single-stranded-DNA-specific exonuclease RecJ 0.71 LU632_RS19470 prlC oligopeptidase A low > 73
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_03185 recJ single-stranded-DNA-specific exonuclease RecJ 0.71 IJEDHG_12590 prlC oligopeptidase A low > 61
Klebsiella michiganensis M5al 0.61 BWI76_RS23805 ssDNA exonuclease RecJ 0.72 BWI76_RS26610 oligopeptidase A low > 92
Pectobacterium carotovorum WPP14 0.60 HER17_RS17880 single-stranded-DNA-specific exonuclease RecJ 0.71 HER17_RS21300 oligopeptidase A 0.79 8
Shewanella loihica PV-4 0.60 Shew_0772 single-stranded-DNA-specific exonuclease RecJ (RefSeq) 0.68 Shew_3657 oligopeptidase A (RefSeq) low > 60
Shewanella amazonensis SB2B 0.59 Sama_2737 single-stranded-DNA-specific exonuclease RecJ (RefSeq) 0.67 Sama_3546 oligopeptidase A (RefSeq) low > 62
Shewanella oneidensis MR-1 0.58 SO0952 recJ single-stranded-DNA-specific exonuclease RecJ (NCBI ptt file) 0.67 SO4699 prlC oligopeptidase A (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.58 Shewana3_3329 single-stranded-DNA-specific exonuclease RecJ (RefSeq) 0.67 Shewana3_4051 oligopeptidase A (RefSeq) low > 73
Pseudomonas sp. S08-1 0.58 OH686_06955 single-stranded-DNA-specific exonuclease RecJ 0.56 OH686_12360 Oligopeptidase A low > 80
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_1298 exonuclease RecJ 0.57 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_1298 exonuclease RecJ 0.57 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A low > 86
Pseudomonas simiae WCS417 0.57 PS417_22855 ssDNA exonuclease RecJ 0.56 PS417_00245 oligopeptidase A 0.32 56
Pseudomonas segetis P6 0.57 ACVTMO_RS07905 recJ single-stranded-DNA-specific exonuclease RecJ 0.57 ACVTMO_RS01765 prlC oligopeptidase A low > 75
Pseudomonas putida KT2440 0.57 PP_1477 ssDNA-specific exonuclease RecJ 0.56 PP_0096 oligopeptidase A low > 96
Pseudomonas fluorescens SBW25 0.57 PFLU_RS24515 single-stranded-DNA-specific exonuclease RecJ 0.56 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS24515 single-stranded-DNA-specific exonuclease RecJ 0.56 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas sp. BP01 0.57 JOY50_RS11745 recJ single-stranded-DNA-specific exonuclease RecJ 0.56 JOY50_RS21245 prlC oligopeptidase A low > 84
Pseudomonas orientalis W4I3 0.57 QF045_RS25045 single-stranded-DNA-specific exonuclease RecJ 0.56 QF045_RS03190 oligopeptidase A low > 93
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_06345 single-stranded-DNA-specific exonuclease RecJ 0.56 AO356_11120 oligopeptidase A low > 104
Pseudomonas aeruginosa PA14 0.57 IKLFDK_19015 single-stranded-DNA-specific exonuclease RecJ 0.58 IKLFDK_25215 oligopeptidase A low > 98
Pseudomonas aeruginosa PUPa3 0.57 NPBIFN_01262 recJ single-stranded-DNA-specific exonuclease RecJ 0.58 NPBIFN_00070 prlC oligopeptidase A low > 101
Pseudomonas aeruginosa MRSN321 0.57 PFGADD_01243 recJ single-stranded-DNA-specific exonuclease RecJ 0.58 PFGADD_00072 prlC oligopeptidase A low > 99
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_3137 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.56 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) low > 103
Pseudomonas sp. SVBP6 0.57 COO64_RS04980 recJ single-stranded-DNA-specific exonuclease RecJ 0.56 COO64_RS02335 prlC oligopeptidase A low > 91
Pseudomonas sp. DMC3 0.56 GFF1996 Single-stranded-DNA-specific exonuclease RecJ 0.56 GFF663 Oligopeptidase A low > 89
Pseudomonas sp. RS175 0.56 PFR28_00339 Single-stranded-DNA-specific exonuclease RecJ 0.56 PFR28_04699 Oligopeptidase A low > 88
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_3020 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.56 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) low > 87
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1730 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.57 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) low > 87
Pseudomonas lactucae CFBP13502 0.56 GEMAOFIL_04722 Single-stranded-DNA-specific exonuclease RecJ 0.56 GEMAOFIL_00254 Oligopeptidase A low > 96
Pseudomonas protegens RBAN4 0.56 FABNJH_05790 recJ single-stranded-DNA-specific exonuclease RecJ 0.56 FABNJH_00260 prlC oligopeptidase A — —
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_04320 single-stranded-DNA-specific exonuclease RecJ 0.56 AO353_10775 oligopeptidase A low > 101
Pseudomonas stutzeri RCH2 0.55 Psest_1544 single-stranded-DNA-specific exonuclease RecJ 0.57 Psest_4320 Zn-dependent oligopeptidases low > 67
Alteromonas macleodii MIT1002 0.52 MIT1002_00788 Single-stranded-DNA-specific exonuclease RecJ 0.66 MIT1002_03633 Oligopeptidase A low > 70
Marinobacter adhaerens HP15 0.50 HP15_766 bacterial RecJ exonuclease 0.58 HP15_3759 oligopeptidase A-like protein low > 73
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_2268 single-stranded-DNA-specific exonuclease RecJ 0.59 B158DRAFT_0457 Zn-dependent oligopeptidases low > 40
Dechlorosoma suillum PS 0.44 Dsui_2860 single-stranded-DNA-specific exonuclease RecJ 0.48 Dsui_0046 Zn-dependent oligopeptidase — —
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.2909.1 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.47 Xcc-8004.4539.1 Oligopeptidase A (EC 3.4.24.70) low > 74
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS02800 single-stranded-DNA-specific exonuclease RecJ 0.48 ABZR86_RS14940 M3 family metallopeptidase low > 74
Methylophilus sp. DMC18 0.43 GFF889 Single-stranded-DNA-specific exonuclease RecJ 0.52 GFF2262 Oligopeptidase A low > 43
Ralstonia solanacearum PSI07 0.43 RPSI07_RS18620 single-stranded-DNA-specific exonuclease RecJ 0.47 RPSI07_RS15795 oligopeptidase A low > 81
Ralstonia solanacearum UW163 0.42 UW163_RS12210 single-stranded-DNA-specific exonuclease RecJ 0.47 UW163_RS15000 oligopeptidase A — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS14740 single-stranded-DNA-specific exonuclease RecJ 0.47 RALBFv3_RS01690 oligopeptidase A low > 76
Ralstonia solanacearum GMI1000 0.42 RS_RS05550 single-stranded-DNA-specific exonuclease RecJ 0.47 RS_RS08035 oligopeptidase A low > 80
Acinetobacter radioresistens SK82 0.42 MPMX26_02917 Single-stranded-DNA-specific exonuclease RecJ 0.46 MPMX26_02685 Oligopeptidase A low > 36
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS06090 single-stranded DNA exonuclease 0.47 RR42_RS07340 oligopeptidase A low > 128
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS00315 single-stranded-DNA-specific exonuclease RecJ 0.47 LRK54_RS08615 M3 family metallopeptidase low > 59
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_06995 recJ single-stranded-DNA-specific exonuclease RecJ 0.48 OKGIIK_15380 dcp oligopeptidase A low > 53
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS10395 single-stranded-DNA-specific exonuclease RecJ 0.47 ABZR87_RS13490 M3 family metallopeptidase low > 80
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS13965 single-stranded DNA exonuclease 0.48 HSERO_RS07290 oligopeptidase A 0.33 31
Variovorax sp. OAS795 0.40 ABID97_RS22940 single-stranded-DNA-specific exonuclease RecJ 0.44 ABID97_RS14080 M3 family metallopeptidase low > 91
Variovorax sp. SCN45 0.40 GFF6700 Single-stranded-DNA-specific exonuclease RecJ 0.44 GFF963 Oligopeptidase A (EC 3.4.24.70) low > 127
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS05835 single-stranded-DNA-specific exonuclease RecJ 0.48 QEN71_RS05695 M3 family metallopeptidase low > 153
Acidovorax sp. GW101-3H11 0.40 Ac3H11_1746 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.43 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) — —
Rhodanobacter sp000427505 FW510-R12 0.40 LRK53_RS09835 DHHA1 domain-containing protein 0.48 LRK53_RS02390 M3 family metallopeptidase low > 59
Acinetobacter baumannii LAC-4 0.40 RR41_RS00920 single-stranded-DNA-specific exonuclease RecJ 0.47 RR41_RS02340 M3 family metallopeptidase low > 55
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_00488 exonuclease RecJ 0.46 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A low > 103
Paraburkholderia graminis OAS925 0.39 ABIE53_002771 single-stranded-DNA-specific exonuclease 0.48 ABIE53_002798 oligopeptidase A low > 113
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS12730 single-stranded DNA exonuclease 0.48 BPHYT_RS12875 oligopeptidase A low > 109
Castellaniella sp019104865 MT123 0.39 ABCV34_RS05005 single-stranded-DNA-specific exonuclease RecJ 0.42 ABCV34_RS04180 M3 family metallopeptidase low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF739 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 0.43 GFF4214 Oligopeptidase A (EC 3.4.24.70) — —

Not shown: 0 genomes with orthologs for CSW01_12240 only; 15 genomes with orthologs for CSW01_01010 only