Conservation of cofitness between CA265_RS21465 and CA265_RS23620 in Pedobacter sp. GW460-11-11-14-LB5

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pedobacter sp. GW460-11-11-14-LB5 1.0 CA265_RS21465 elongation factor P 1.0 CA265_RS23620 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.46 3
Lysobacter sp. OAE881 0.41 ABIE51_RS13500 elongation factor P 0.15 ABIE51_RS05260 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_0189 translation elongation factor P 0.39 Echvi_3055 RNA methyltransferase, RsmE family — —
Bacteroides stercoris CC31F 0.39 HMPREF1181_RS03235 elongation factor P 0.48 HMPREF1181_RS05940 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 56
Bacteroides ovatus ATCC 8483 0.39 BACOVA_03523 translation elongation factor P 0.49 BACOVA_05130 RNA methyltransferase, RsmE family low > 94
Bacteroides thetaiotaomicron VPI-5482 0.39 BT3709 elongation factor P (NCBI ptt file) 0.48 BT4328 conserved hypothetical protein (NCBI ptt file) — —
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.2286.1 Translation elongation factor P 0.19 Xcc-8004.1558.1 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) — —
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS08535 elongation factor P 0.48 HMPREF1058_RS05940 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 67
Phocaeicola dorei CL03T12C01 0.39 ABI39_RS02760 elongation factor P 0.48 ABI39_RS18150 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_09535 Elongation factor P 0.16 OKGIIK_11035 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c23980 translation elongation factor P 0.14 PGA1_c02950 RNA methyltransferase-like protein low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU1666 efp translation elongation factor P (TIGR) 0.17 DVU1685 conserved hypothetical protein TIGR00046 (TIGR) low > 55
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS08795 elongation factor P 0.19 ABZR86_RS10230 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Dinoroseobacter shibae DFL-12 0.36 Dshi_2094 translation elongation factor P (RefSeq) 0.15 Dshi_3099 protein of unknown function DUF558 (RefSeq) low > 64
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS08830 elongation factor P 0.16 A4249_RS00350 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_0717 translation elongation factor P 0.15 Ga0059261_0807 RNA methyltransferase, RsmE family — —
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS10235 elongation factor P 0.18 ABZR87_RS01505 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS14515 elongation factor P 0.19 RALBFv3_RS05880 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Ralstonia solanacearum UW163 0.35 UW163_RS11980 elongation factor P 0.19 UW163_RS07745 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_0985 translation elongation factor P 0.19 B158DRAFT_0180 RNA methyltransferase, RsmE family low > 40
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_0372 translation elongation factor P (RefSeq) 0.19 DvMF_0340 16S ribosomal RNA methyltransferase RsmE (RefSeq) low > 51
Dechlorosoma suillum PS 0.34 Dsui_2467 translation elongation factor P 0.14 Dsui_1568 RNA methyltransferase, RsmE family — —
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS04655 elongation factor P 0.19 QEN71_RS27020 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Castellaniella sp019104865 MT123 0.33 ABCV34_RS01630 elongation factor P 0.20 ABCV34_RS15445 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Rhodopseudomonas palustris CGA009 0.33 TX73_012985 elongation factor P 0.14 TX73_005910 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Paraburkholderia graminis OAS925 0.33 ABIE53_003027 elongation factor P 0.17 ABIE53_003540 16S rRNA (uracil1498-N3)-methyltransferase — —
Parabacteroides merdae CL09T00C40 0.32 HMPREF1078_RS04925 elongation factor P 0.47 HMPREF1078_RS10135 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 61
Rhodanobacter denitrificans MT42 0.32 LRK55_RS02235 elongation factor P 0.17 LRK55_RS03930 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS02480 elongation factor P 0.17 LRK54_RS04160 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Acidovorax sp. GW101-3H11 0.32 Ac3H11_366 Translation elongation factor P 0.16 Ac3H11_4323 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) — —
Fusobacterium nucleatum SB010 0.31 HUW76_04460 elongation factor P 0.13 HUW76_04180 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Ralstonia solanacearum PSI07 0.31 RPSI07_RS18945 elongation factor P 0.19 RPSI07_RS11365 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF3844 Translation elongation factor P 0.15 GFF2462 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) — —
Ralstonia solanacearum GMI1000 0.31 RS_RS05295 elongation factor P 0.19 RS_RS13825 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Bosea sp. OAE506 0.31 ABIE41_RS00085 elongation factor P 0.15 ABIE41_RS23100 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Rhizobium sp. OAE497 0.31 ABIE40_RS18560 elongation factor P 0.12 ABIE40_RS03520 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS14010 elongation factor P 0.17 RR42_RS17590 16S rRNA methyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_00758 translation elongation factor P EF-P 0.16 CCNA_03528 RNA methyltransferase — —
Sinorhizobium meliloti 1021 0.31 SMc00357 elongation factor P 0.12 SMc00826 16S ribosomal RNA methyltransferase RsmE — —
Variovorax sp. SCN45 0.31 GFF2861 Translation elongation factor P 0.17 GFF3255 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193) — —
Caulobacter crescentus NA1000 0.31 CCNA_00758 translation elongation factor P EF-P 0.16 CCNA_03528 RNA methyltransferase — —
Agrobacterium fabrum C58 0.30 Atu2553 elongation factor P 0.14 Atu0657 hypothetical protein — —
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS15375 elongation factor P 0.17 HSERO_RS07110 16S rRNA methyltransferase — —
Pseudomonas stutzeri RCH2 0.26 Psest_1799 translation elongation factor P 0.20 Psest_0305 RNA methyltransferase, RsmE family — —
Shewanella amazonensis SB2B 0.25 Sama_1699 elongation factor P (RefSeq) 0.20 Sama_0575 16S ribosomal RNA methyltransferase RsmE (RefSeq) — —
Shewanella loihica PV-4 0.23 Shew_1915 elongation factor P (RefSeq) 0.22 Shew_3224 hypothetical protein (RefSeq) — —
Pseudomonas sp. RS175 0.22 PFR28_00970 Elongation factor P 0.19 PFR28_04209 Ribosomal RNA small subunit methyltransferase E — —
Pseudomonas fluorescens FW300-N2E2 0.22 Pf6N2E2_2461 Translation elongation factor P 0.19 Pf6N2E2_4630 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) — —
Pseudomonas fluorescens FW300-N2C3 0.22 AO356_03160 elongation factor P 0.19 AO356_13565 16S rRNA methyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_3628 translation elongation factor P (EF-P) 0.19 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_3628 translation elongation factor P (EF-P) 0.19 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase — —
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_2234 Translation elongation factor P 0.19 PfGW456L13_1043 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) — —
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_19080 elongation factor P 0.19 AO353_08050 16S rRNA methyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_278 Translation elongation factor P 0.20 Pf1N1B4_2376 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) — —
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS08430 elongation factor P 0.20 PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Pseudomonas simiae WCS417 0.21 PS417_08480 elongation factor P 0.19 PS417_26545 16S rRNA methyltransferase — —
Pseudomonas fluorescens SBW25 0.21 PFLU_RS08430 elongation factor P 0.20 PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Pseudomonas putida KT2440 0.20 PP_1858 elongation factor P 0.20 PP_4985 16S rRNA m3U1498 methyltransferase — —
Pseudomonas sp. S08-1 0.20 OH686_22440 Translation elongation factor P 0.20 OH686_10855 16S rRNA (uracil(1498)-N(3))-methyltransferase — —

Not shown: 3 genomes with orthologs for CA265_RS21465 only; 37 genomes with orthologs for CA265_RS23620 only