Conservation of cofitness between BPHYT_RS15920 and BPHYT_RS33835 in Burkholderia phytofirmans PsJN

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS15920 argininosuccinate synthase 1.0 BPHYT_RS33835 O-succinylhomoserine sulfhydrylase 0.94 6
Paraburkholderia graminis OAS925 1.00 ABIE53_003355 argininosuccinate synthase 0.93 ABIE53_004817 O-succinylhomoserine sulfhydrylase — —
Paraburkholderia bryophila 376MFSha3.1 0.99 H281DRAFT_04120 argininosuccinate synthase 0.94 H281DRAFT_06059 O-succinylhomoserine sulfhydrylase 0.77 1
Cupriavidus basilensis FW507-4G11 0.91 RR42_RS17170 argininosuccinate synthase 0.73 RR42_RS14320 O-succinylhomoserine sulfhydrylase — —
Dechlorosoma suillum PS 0.84 Dsui_3248 argininosuccinate synthase 0.65 Dsui_3185 O-succinylhomoserine sulfhydrylase — —
Pseudomonas stutzeri RCH2 0.76 Psest_3121 argininosuccinate synthase 0.54 Psest_2578 O-succinylhomoserine sulfhydrylase — —
Pseudomonas putida KT2440 0.76 PP_1088 Argininosuccinate synthase 0.53 PP_2001 O-succinylhomoserine sulfhydrylase 0.83 25
Pseudomonas sp. RS175 0.75 PFR28_03353 Argininosuccinate synthase 0.55 PFR28_02810 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_742 Argininosuccinate synthase (EC 6.3.4.5) 0.33 Pf1N1B4_4890 Cystathionine gamma-lyase (EC 4.4.1.1) low > 87
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_18325 argininosuccinate synthase 0.55 AO356_21470 O-succinylhomoserine sulfhydrylase 0.95 9
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5) 0.55 Pf6N2E2_77 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) — —
Pseudomonas simiae WCS417 0.75 PS417_05640 argininosuccinate synthase 0.55 PS417_18530 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens SBW25 0.74 PFLU_RS05725 argininosuccinate synthase 0.55 PFLU_RS20510 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_04105 argininosuccinate synthase 0.55 AO353_20695 O-succinylhomoserine sulfhydrylase 0.88 13
Pseudomonas fluorescens SBW25-INTG 0.74 PFLU_RS05725 argininosuccinate synthase 0.55 PFLU_RS20510 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) 0.55 PfGW456L13_3934 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.82 22
Pseudomonas sp. S08-1 0.74 OH686_03930 argininosuccinate synthase 0.56 OH686_04415 O-succinylhomoserine sulfhydrylase 0.68 43
Marinobacter adhaerens HP15 0.74 HP15_2367 argininosuccinate synthase 0.55 HP15_1820 methionine gamma-lyase — —
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_3892 argininosuccinate synthase 0.57 Psyr_1669 O-succinylhomoserine sulfhydrylase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_3892 argininosuccinate synthase 0.57 Psyr_1669 O-succinylhomoserine sulfhydrylase — —
Azospirillum brasilense Sp245 0.70 AZOBR_RS00785 argininosuccinate synthase 0.46 AZOBR_RS02140 O-succinylhomoserine sulfhydrylase — —
Azospirillum sp. SherDot2 0.70 MPMX19_02369 Argininosuccinate synthase 0.46 MPMX19_01364 O-succinylhomoserine sulfhydrylase — —
Magnetospirillum magneticum AMB-1 0.68 AMB_RS05720 argininosuccinate synthase 0.50 AMB_RS21365 O-succinylhomoserine sulfhydrylase — —
Rhodospirillum rubrum S1H 0.68 Rru_A3751 Argininosuccinate synthase (NCBI) 0.48 Rru_A3214 O-succinylhomoserine sulfhydrylase (NCBI) 0.85 26
Caulobacter crescentus NA1000 0.67 CCNA_00128 argininosuccinate synthase 0.44 CCNA_02321 O-succinylhomoserine sulfhydrylase — —
Caulobacter crescentus NA1000 Δfur 0.67 CCNA_00128 argininosuccinate synthase 0.44 CCNA_02321 O-succinylhomoserine sulfhydrylase low > 67
Phaeobacter inhibens DSM 17395 0.67 PGA1_c34920 argininosuccinate synthase ArgG 0.49 PGA1_c23540 O-succinylhomoserine sulfhydrylase MetZ — —
Brevundimonas sp. GW460-12-10-14-LB2 0.67 A4249_RS14275 argininosuccinate synthase 0.34 A4249_RS08315 cystathionine gamma-synthase low > 48
Dinoroseobacter shibae DFL-12 0.65 Dshi_3472 Argininosuccinate synthase (RefSeq) 0.49 Dshi_2410 O-succinylhomoserine sulfhydrylase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.64 Ga0059261_1393 argininosuccinate synthase (EC 6.3.4.5) 0.48 Ga0059261_3194 O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) (from data) 0.90 55
Agrobacterium fabrum C58 0.64 Atu2667 argininosuccinate synthase 0.45 Atu0432 O-succinylhomoserine sulfhydrylase — —
Rhizobium sp. OAE497 0.64 ABIE40_RS18150 argininosuccinate synthase 0.45 ABIE40_RS02340 O-succinylhomoserine sulfhydrylase — —
Sinorhizobium meliloti 1021 0.64 SMc03826 argininosuccinate synthase 0.45 SMc02217 O-succinylhomoserine sulfhydrylase 0.78 20
Bosea sp. OAE506 0.64 ABIE41_RS00340 argininosuccinate synthase 0.48 ABIE41_RS03970 O-succinylhomoserine sulfhydrylase — —
Pantoea sp. MT58 0.47 IAI47_00915 argininosuccinate synthase 0.28 IAI47_00880 cystathionine gamma-synthase 0.98 3
Erwinia tracheiphila SCR3 0.47 LU632_RS19605 argininosuccinate synthase 0.30 LU632_RS19640 metB cystathionine gamma-synthase 0.65 49
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_13370 argininosuccinate synthase 0.27 CSW01_13550 O-succinylhomoserine (thiol)-lyase low > 62
Shewanella sp. ANA-3 0.46 Shewana3_3902 argininosuccinate synthase (RefSeq) 0.40 Shewana3_2643 methionine gamma-lyase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.46 SO0278 argG argininosuccinate synthase (NCBI ptt file) 0.40 SO1812 mdeA Methionine gamma-lyase (EC 4.4.1.11) (from data) low > 76
Shewanella amazonensis SB2B 0.45 Sama_0259 argininosuccinate synthase (RefSeq) 0.37 Sama_1242 methionine gamma-lyase (RefSeq) low > 62
Shewanella loihica PV-4 0.45 Shew_0205 argininosuccinate synthase (RefSeq) 0.35 Shew_2491 methionine gamma-lyase (RefSeq) low > 60
Mycobacterium tuberculosis H37Rv 0.34 Rv1658 Probable argininosuccinate synthase ArgG 0.47 Rv0391 Probable O-succinylhomoserine sulfhydrylase MetZ (OSH sulfhydrylase) — —
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_1976 argininosuccinate synthase (EC 6.3.4.5) 0.40 B158DRAFT_1522 methionine gamma-lyase low > 40
Dyella japonica UNC79MFTsu3.2 0.20 ABZR86_RS08715 arginosuccinate synthetase (EC 6.3.4.5) (from data) 0.34 ABZR86_RS18745 PLP-dependent aspartate aminotransferase family protein — —
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.2318.1 Argininosuccinate synthase (EC 6.3.4.5) 0.33 Xcc-8004.4517.1 Cystathionine gamma-lyase (EC 4.4.1.1) low > 74
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS02400 argininosuccinate synthase 0.32 LRK54_RS05660 PLP-dependent aspartate aminotransferase family protein low > 59
Lysobacter sp. OAE881 0.19 ABIE51_RS13405 argininosuccinate synthase 0.33 ABIE51_RS04295 cystathionine gamma-synthase low > 62
Rhodanobacter denitrificans MT42 0.19 LRK55_RS02155 argininosuccinate synthase 0.32 LRK55_RS05410 cystathionine gamma-synthase low > 63
Mucilaginibacter yixingensis YX-36 DSM 26809 0.19 ABZR88_RS15515 argininosuccinate synthase 0.31 ABZR88_RS06685 cystathionine gamma-synthase — —
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_09465 argG argininosuccinate synthase 0.33 OKGIIK_01180 metC cystathionine beta-lyase low > 52
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_3846 argininosuccinate synthase 0.48 Echvi_2283 Cystathionine beta-lyases/cystathionine gamma-synthases 0.94 14
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS18545 argininosuccinate synthase 0.46 CA265_RS13080 O-succinylhomoserine sulfhydrylase 0.96 8
Pontibacter actiniarum KMM 6156, DSM 19842 0.18 CA264_06255 argininosuccinate synthase 0.45 CA264_02530 O-succinylhomoserine sulfhydrylase low > 74
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS09235 argininosuccinate synthase 0.88 QEN71_RS17685 O-succinylhomoserine sulfhydrylase low > 153
Variovorax sp. SCN45 0.15 GFF3096 Argininosuccinate synthase (EC 6.3.4.5) 0.56 GFF3088 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) — —
Variovorax sp. OAS795 0.15 ABID97_RS21670 argininosuccinate synthase 0.58 ABID97_RS21630 O-succinylhomoserine sulfhydrylase — —
Rhodopseudomonas palustris CGA009 0.14 TX73_002040 argininosuccinate synthase 0.48 TX73_024775 O-succinylhomoserine sulfhydrylase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.14 GFF294 Argininosuccinate synthase (EC 6.3.4.5) 0.60 GFF301 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.14 OHPLBJKB_00528 Argininosuccinate synthase 0.31 OHPLBJKB_04111 Cystathionine gamma-synthase low > 73
Escherichia coli ECRC99 0.14 KEDOAH_10060 argG argininosuccinate synthase 0.31 KEDOAH_14485 metB cystathionine gamma-synthase — —
Escherichia coli ECRC101 0.14 MCAODC_08610 argG argininosuccinate synthase 0.31 MCAODC_04175 metB cystathionine gamma-synthase 0.91 31
Escherichia coli ECRC102 0.14 NIAGMN_15850 argG argininosuccinate synthase 0.31 NIAGMN_11430 metB cystathionine gamma-synthase — —
Escherichia coli BL21 0.14 ECD_03038 argininosuccinate synthetase 0.31 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.76 41
Escherichia coli ECRC100 0.14 OKFHMN_18090 argG argininosuccinate synthase 0.31 OKFHMN_13675 metB cystathionine gamma-synthase 0.94 44
Escherichia coli ECRC62 0.14 BNILDI_01645 argG argininosuccinate synthase 0.31 BNILDI_05715 metB cystathionine gamma-synthase 0.96 28
Escherichia fergusonii Becca 0.14 EFB2_00651 Argininosuccinate synthase 0.31 EFB2_04679 Cystathionine gamma-synthase low > 86
Escherichia coli ECOR27 0.14 NOLOHH_09890 argG argininosuccinate synthase 0.31 NOLOHH_05820 metB cystathionine gamma-synthase 0.85 51
Escherichia coli Nissle 1917 0.14 ECOLIN_RS18275 argininosuccinate synthase 0.31 ECOLIN_RS22725 cystathionine gamma-synthase 0.94 11
Escherichia coli ECOR38 0.14 HEPCGN_16965 argG argininosuccinate synthase 0.31 HEPCGN_12345 metB cystathionine gamma-synthase 0.95 39
Escherichia coli ECRC98 0.14 JDDGAC_21715 argG argininosuccinate synthase 0.31 JDDGAC_17300 metB cystathionine gamma-synthase 0.89 16
Escherichia coli BW25113 0.14 b3172 argG argininosuccinate synthase (NCBI) 0.31 b3939 metB cystathionine gamma-synthase (NCBI) 0.81 58

Not shown: 22 genomes with orthologs for BPHYT_RS15920 only; 11 genomes with orthologs for BPHYT_RS33835 only