Conservation of cofitness between BPHYT_RS17885 and BPHYT_RS14895 in Burkholderia phytofirmans PsJN

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS17885 3-dehydroquinate synthase 1.0 BPHYT_RS14895 3-phosphoshikimate 1-carboxyvinyltransferase 0.92 4
Paraburkholderia graminis OAS925 0.96 ABIE53_003740 3-dehydroquinate synthase 0.91 ABIE53_003154 3-phosphoshikimate 1-carboxyvinyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_05615 3-dehydroquinate synthase 0.95 H281DRAFT_03922 3-phosphoshikimate 1-carboxyvinyltransferase — —
Paraburkholderia sabiae LMG 24235 0.89 QEN71_RS28035 3-dehydroquinate synthase 0.90 QEN71_RS04085 3-phosphoshikimate 1-carboxyvinyltransferase 0.80 26
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS19005 3-dehydroquinate synthase 0.67 RR42_RS04475 3-phosphoshikimate 1-carboxyvinyltransferase 0.92 2
Ralstonia solanacearum UW163 0.72 UW163_RS06680 3-dehydroquinate synthase 0.69 UW163_RS16035 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS06935 3-dehydroquinate synthase 0.69 RALBFv3_RS13775 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum PSI07 0.71 RPSI07_RS10300 3-dehydroquinate synthase 0.69 RPSI07_RS19695 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia sp. UNC404CL21Col 0.71 ABZR87_RS02590 3-dehydroquinate synthase 0.70 ABZR87_RS09465 3-phosphoshikimate 1-carboxyvinyltransferase 0.91 2
Ralstonia solanacearum GMI1000 0.71 RS_RS14880 3-dehydroquinate synthase 0.69 RS_RS04510 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas fluorescens SBW25 0.57 PFLU_RS02030 3-dehydroquinate synthase 0.21 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS02030 3-dehydroquinate synthase 0.21 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas simiae WCS417 0.57 PS417_01985 3-dehydroquinate synthase 0.21 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase — —
Shewanella amazonensis SB2B 0.55 Sama_3367 3-dehydroquinate synthase (RefSeq) 0.56 Sama_1734 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.80 3
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_0409 3-dehydroquinate synthase 0.25 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_0409 3-dehydroquinate synthase 0.25 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Alteromonas macleodii MIT1002 0.53 MIT1002_00447 3-dehydroquinate synthase 0.53 MIT1002_02191 3-phosphoshikimate 1-carboxyvinyltransferase — —
Shewanella oneidensis MR-1 0.53 SO0287 aroB 3-dehydroquinate synthase (NCBI ptt file) 0.56 SO2404 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) 0.95 3
Shewanella sp. ANA-3 0.52 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) 0.56 Shewana3_1975 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.95 4
Shewanella loihica PV-4 0.51 Shew_0214 3-dehydroquinate synthase (RefSeq) 0.56 Shew_1952 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.89 2
Rahnella sp. WP5 0.51 EX31_RS04720 3-dehydroquinate synthase 0.56 EX31_RS18250 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC62 0.51 BNILDI_02615 aroB 3-dehydroquinate synthase 0.54 BNILDI_20300 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.97 2
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_00314 3-dehydroquinate synthase 0.54 OHPLBJKB_02760 3-phosphoshikimate 1-carboxyvinyltransferase low > 73
Escherichia coli ECOR27 0.51 NOLOHH_08905 aroB 3-dehydroquinate synthase 0.54 NOLOHH_22045 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.91 24
Escherichia coli BL21 0.51 ECD_03241 3-dehydroquinate synthase 0.54 ECD_00912 5-enolpyruvylshikimate-3-phosphate synthetase 0.76 3
Escherichia coli ECRC98 0.50 JDDGAC_20745 aroB 3-dehydroquinate synthase 0.54 JDDGAC_09095 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.95 2
Escherichia fergusonii Becca 0.50 EFB2_00439 3-dehydroquinate synthase 0.55 EFB2_03156 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Escherichia coli ECRC99 0.50 KEDOAH_11025 aroB 3-dehydroquinate synthase 0.54 KEDOAH_22250 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC100 0.50 OKFHMN_17115 aroB 3-dehydroquinate synthase 0.54 OKFHMN_05485 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.97 7
Escherichia coli ECRC102 0.50 NIAGMN_14885 aroB 3-dehydroquinate synthase 0.54 NIAGMN_03205 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC101 0.50 MCAODC_07645 aroB 3-dehydroquinate synthase 0.54 MCAODC_24875 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.97 1
Escherichia coli Nissle 1917 0.50 ECOLIN_RS19360 3-dehydroquinate synthase 0.55 ECOLIN_RS04810 3-phosphoshikimate 1-carboxyvinyltransferase 0.70 41
Pantoea sp. MT58 0.50 IAI47_01895 3-dehydroquinate synthase 0.54 IAI47_12860 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECOR38 0.50 HEPCGN_15935 aroB 3-dehydroquinate synthase 0.54 HEPCGN_23035 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.88 8
Escherichia coli BW25113 0.50 b3389 aroB 3-dehydroquinate synthase (NCBI) 0.54 b0908 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) 0.95 3
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_13300 3-dehydroquinate synthase 0.58 CSW01_08705 3-phosphoshikimate 1-carboxyvinyltransferase low > 62
Klebsiella michiganensis M5al 0.49 BWI76_RS26085 3-dehydroquinate synthase 0.54 BWI76_RS09760 3-phosphoshikimate 1-carboxyvinyltransferase 0.55 50
Serratia liquefaciens MT49 0.49 IAI46_23700 3-dehydroquinate synthase 0.54 IAI46_08640 3-phosphoshikimate 1-carboxyvinyltransferase 0.70 22
Dickeya dadantii 3937 0.49 DDA3937_RS19545 3-dehydroquinate synthase 0.55 DDA3937_RS09675 3-phosphoshikimate 1-carboxyvinyltransferase — —
Enterobacter sp. TBS_079 0.49 MPMX20_04278 3-dehydroquinate synthase 0.55 MPMX20_01567 3-phosphoshikimate 1-carboxyvinyltransferase 0.88 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) 0.55 GFF3665 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) low > 78
Pectobacterium carotovorum WPP14 0.48 HER17_RS01780 3-dehydroquinate synthase 0.52 HER17_RS12285 3-phosphoshikimate 1-carboxyvinyltransferase 0.80 50
Enterobacter asburiae PDN3 0.48 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) 0.54 EX28DRAFT_2027 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.59 35
Dickeya dianthicola ME23 0.48 DZA65_RS20760 3-dehydroquinate synthase 0.54 DZA65_RS09995 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dianthicola 67-19 0.48 HGI48_RS19675 3-dehydroquinate synthase 0.54 HGI48_RS09685 3-phosphoshikimate 1-carboxyvinyltransferase — —
Erwinia tracheiphila SCR3 0.48 LU632_RS22865 aroB 3-dehydroquinate synthase 0.51 LU632_RS09795 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.72 8
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0764 3-dehydroquinate synthase (EC 4.2.3.4) 0.21 B158DRAFT_2432 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) 0.82 2
Rhodospirillum rubrum S1H 0.43 Rru_A3741 3-dehydroquinate synthase (NCBI) 0.12 Rru_A0295 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) — —
Lysobacter sp. OAE881 0.42 ABIE51_RS16100 3-dehydroquinate synthase 0.18 ABIE51_RS12135 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS04310 3-dehydroquinate synthase 0.16 LRK54_RS00390 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_11185 aroB 3-dehydroquinate synthase 0.17 OKGIIK_06920 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter denitrificans MT42 0.41 LRK55_RS04085 3-dehydroquinate synthase 0.17 LRK55_RS00130 3-phosphoshikimate 1-carboxyvinyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_03104 3-dehydroquinate synthase 0.15 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase low > 67
Caulobacter crescentus NA1000 0.40 CCNA_03104 3-dehydroquinate synthase 0.15 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase — —
Magnetospirillum magneticum AMB-1 0.40 AMB_RS19865 3-dehydroquinate synthase 0.15 AMB_RS21555 3-phosphoshikimate 1-carboxyvinyltransferase — —
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_0525 aroB 3-dehydroquinate synthase 0.15 Synpcc7942_0232 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Azospirillum sp. SherDot2 0.39 MPMX19_02639 3-dehydroquinate synthase 0.13 MPMX19_02233 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS10480 3-dehydroquinate synthase 0.18 ABZR86_RS02230 3-phosphoshikimate 1-carboxyvinyltransferase 0.85 3
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS04175 3-dehydroquinate synthase 0.16 A4249_RS10920 3-phosphoshikimate 1-carboxyvinyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) 0.15 Xcc-8004.3281.1 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) 0.67 4
Azospirillum brasilense Sp245 0.38 AZOBR_RS03220 3-dehydroquinate synthase 0.14 AZOBR_RS03090 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhizobium sp. OAE497 0.38 ABIE40_RS17670 3-dehydroquinate synthase 0.24 ABIE40_RS05420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Sinorhizobium meliloti 1021 0.38 SMc00696 3-dehydroquinate synthase 0.17 SMc00333 3-phosphoshikimate 1-carboxyvinyltransferase — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c14100 3-dehydroquinate synthase AroB 0.13 PGA1_c04810 3-phosphoshikimate 1-carboxyvinyltransferase AroA — —
Rhodopseudomonas palustris CGA009 0.37 TX73_002610 3-dehydroquinate synthase 0.14 TX73_000320 3-phosphoshikimate 1-carboxyvinyltransferase — —
Agrobacterium fabrum C58 0.36 Atu3625 3-dehydroquinate synthase 0.22 Atu0642 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dinoroseobacter shibae DFL-12 0.36 Dshi_1608 3-dehydroquinate synthase (RefSeq) 0.14 Dshi_1022 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_3591 3-dehydroquinate synthase (EC 4.2.3.4) 0.14 Ga0059261_0167 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Mycobacterium tuberculosis H37Rv 0.30 Rv2538c 3-dehydroquinate synthase AroB 0.16 Rv3227 3-phosphoshikimate 1-carboxyvinyltransferase AroA (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS05215 3-dehydroquinate synthase 0.25 ABZR88_RS07000 3-phosphoshikimate 1-carboxyvinyltransferase — —
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS09265 3-dehydroquinate synthase 0.26 HMPREF1181_RS09330 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 12
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_13105 3-dehydroquinate synthase 0.21 CA264_13100 3-phosphoshikimate 1-carboxyvinyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_0121 3-dehydroquinate synthase 0.25 Echvi_0122 5-enolpyruvylshikimate-3-phosphate synthase — —
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS04395 3-dehydroquinate synthase 0.26 HMPREF1078_RS05635 3-phosphoshikimate 1-carboxyvinyltransferase — —

Not shown: 17 genomes with orthologs for BPHYT_RS17885 only; 13 genomes with orthologs for BPHYT_RS14895 only