| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS03650 | | DNA mismatch repair protein | 1.0 | BPHYT_RS06985 | | fumarate hydratase | 0.38 | 13 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.88 | H281DRAFT_04712 | | DNA mismatch repair protein MutL | 0.98 | H281DRAFT_04956 | | fumarase, class I, homodimeric | — | — |
| Paraburkholderia graminis OAS925 | 0.86 | ABIE53_000877 | | DNA mismatch repair protein MutL | 0.98 | ABIE53_001662 | | fumarate hydratase class I | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.81 | QEN71_RS26435 | | DNA mismatch repair endonuclease MutL | 0.97 | QEN71_RS23780 | | fumarate hydratase | low | > 153 |
| Ralstonia solanacearum GMI1000 | 0.58 | RS_RS12850 | | DNA mismatch repair protein MutL | 0.86 | RS_RS09830 | | fumarate hydratase | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.58 | RALBFv3_RS05230 | | DNA mismatch repair endonuclease MutL | 0.86 | RALBFv3_RS02460 | | fumarate hydratase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.58 | UW163_RS08395 | | DNA mismatch repair endonuclease MutL | 0.86 | UW163_RS11265 | | fumarate hydratase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.58 | ABZR87_RS00870 | | DNA mismatch repair endonuclease MutL | 0.87 | ABZR87_RS14375 | | fumarate hydratase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.57 | RPSI07_RS12070 | | DNA mismatch repair endonuclease MutL | 0.92 | RPSI07_RS14865 | | fumarate hydratase | low | > 81 |
| Castellaniella sp019104865 MT123 | 0.45 | ABCV34_RS08785 | | DNA mismatch repair endonuclease MutL | 0.75 | ABCV34_RS09450 | | fumarate hydratase | low | > 48 |
| Variovorax sp. SCN45 | 0.44 | GFF4800 | | DNA mismatch repair protein MutL | 0.77 | GFF483 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | low | > 127 |
| Variovorax sp. OAS795 | 0.43 | ABID97_RS20310 | | DNA mismatch repair endonuclease MutL | 0.77 | ABID97_RS17550 | | fumarate hydratase | low | > 91 |
| Dechlorosoma suillum PS | 0.43 | Dsui_1551 | | DNA mismatch repair protein MutL | 0.76 | Dsui_2001 | | hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily | — | — |
| Pseudomonas putida KT2440 | 0.40 | PP_4896 | | DNA mismatch repair protein MutL | 0.76 | PP_0897 | | Fumarate hydratase, class I | — | — |
| Pseudomonas stutzeri RCH2 | 0.40 | Psest_0681 | | DNA mismatch repair protein MutL | 0.76 | Psest_3193 | | hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.40 | Psyr_0570 | | DNA mismatch repair protein MutL | 0.77 | Psyr_4031 | | fumarase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.40 | Psyr_0570 | | DNA mismatch repair protein MutL | 0.77 | Psyr_4031 | | fumarase | — | — |
| Pseudomonas sp. S08-1 | 0.40 | OH686_09480 | | DNA mismatch repair protein MutL | 0.75 | OH686_18780 | | Fumarate hydratase class I, aerobic | — | — |
| Marinobacter adhaerens HP15 | 0.39 | HP15_2501 | | DNA mismatch repair protein mutL | 0.72 | HP15_1143 | | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.39 | Xcc-8004.2256.1 | | DNA mismatch repair protein MutL | 0.76 | Xcc-8004.3506.1 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.39 | PFLU_RS02560 | | DNA mismatch repair endonuclease MutL | 0.77 | PFLU_RS24270 | | fumarate hydratase | — | — |
| Pseudomonas fluorescens SBW25 | 0.39 | PFLU_RS02560 | | DNA mismatch repair endonuclease MutL | 0.77 | PFLU_RS24270 | | fumarate hydratase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.39 | AO356_08665 | | DNA mismatch repair protein | 0.76 | AO356_17810 | | fumarate hydratase | — | — |
| Pseudomonas simiae WCS417 | 0.39 | PS417_02480 | | DNA mismatch repair protein | 0.77 | PS417_22635 | | fumarate hydratase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.39 | Pf6N2E2_3616 | | DNA mismatch repair protein MutL | 0.76 | Pf6N2E2_5489 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | — | — |
| Pseudomonas sp. RS175 | 0.39 | PFR28_05119 | | DNA mismatch repair protein MutL | 0.76 | PFR28_03458 | | Fumarate hydratase class I, aerobic | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.39 | Pf1N1B4_1414 | | DNA mismatch repair protein MutL | 0.76 | Pf1N1B4_683 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | low | > 87 |
| Lysobacter sp. OAE881 | 0.38 | ABIE51_RS08065 | | DNA mismatch repair endonuclease MutL | 0.77 | ABIE51_RS12620 | | fumarate hydratase | low | > 62 |
| Pseudomonas fluorescens FW300-N2E3 | 0.38 | AO353_13135 | | DNA mismatch repair protein | 0.76 | AO353_03795 | | fumarate hydratase | low | > 101 |
| Rhodanobacter denitrificans FW104-10B01 | 0.38 | LRK54_RS15150 | | DNA mismatch repair endonuclease MutL | 0.77 | LRK54_RS12620 | | fumarate hydratase | 0.34 | 27 |
| Rhodanobacter denitrificans MT42 | 0.38 | LRK55_RS14865 | | DNA mismatch repair endonuclease MutL | 0.77 | LRK55_RS12360 | | fumarate hydratase | low | > 63 |
| Pseudomonas fluorescens GW456-L13 | 0.38 | PfGW456L13_156 | | DNA mismatch repair protein MutL | 0.76 | PfGW456L13_1808 | | Fumarate hydratase class I, aerobic (EC 4.2.1.2) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS17205 | | DNA mismatch repair protein | 0.93 | RR42_RS13905 | | fumarate hydratase | low | > 128 |
| Dyella japonica UNC79MFTsu3.2 | 0.37 | ABZR86_RS00855 | | DNA mismatch repair endonuclease MutL | 0.78 | ABZR86_RS19555 | | fumarate hydratase | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.37 | OKGIIK_03920 | mutL | DNA mismatch repair endonuclease MutL | 0.77 | OKGIIK_02115 | ttdA | fumarate hydratase | low | > 52 |
| Herbaspirillum seropedicae SmR1 | 0.34 | HSERO_RS04190 | | DNA mismatch repair protein | 0.82 | HSERO_RS07760 | | fumarate hydratase | — | — |
| Azospirillum brasilense Sp245 | 0.30 | AZOBR_RS05025 | | DNA mismatch repair protein MutL | 0.20 | AZOBR_RS10315 | | fumarate hydratase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.30 | MPMX19_01619 | | DNA mismatch repair protein MutL | 0.19 | MPMX19_03166 | | Fumarate hydratase class I, aerobic | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.29 | Ga0059261_0371 | | DNA mismatch repair protein MutL | 0.70 | Ga0059261_3334 | | hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region | low | > 68 |
| Rhizobium sp. OAE497 | 0.28 | ABIE40_RS05235 | | DNA mismatch repair endonuclease MutL | 0.21 | ABIE40_RS10550 | | fumarate hydratase | low | > 107 |
| Bosea sp. OAE506 | 0.28 | ABIE41_RS23235 | | DNA mismatch repair endonuclease MutL | 0.19 | ABIE41_RS00110 | | fumarate hydratase | low | > 77 |
| Pantoea sp. MT58 | 0.25 | IAI47_02580 | | DNA mismatch repair endonuclease MutL | 0.18 | IAI47_20435 | | fumarate hydratase | low | > 76 |
| Dickeya dadantii 3937 | 0.25 | DDA3937_RS18620 | | DNA mismatch repair endonuclease MutL | 0.18 | DDA3937_RS04540 | | fumarate hydratase | 0.74 | 5 |
| Pectobacterium carotovorum WPP14 | 0.25 | HER17_RS02575 | | DNA mismatch repair endonuclease MutL | 0.18 | HER17_RS17120 | | fumarate hydratase | low | > 75 |
| Dickeya dianthicola ME23 | 0.24 | DZA65_RS19690 | | DNA mismatch repair endonuclease MutL | 0.18 | DZA65_RS04420 | | fumarate hydratase | low | > 75 |
| Enterobacter sp. TBS_079 | 0.24 | MPMX20_00451 | | DNA mismatch repair protein MutL | 0.19 | MPMX20_02966 | | Fumarate hydratase class I, anaerobic | low | > 85 |
| Erwinia tracheiphila SCR3 | 0.24 | LU632_RS02045 | mutL | DNA mismatch repair endonuclease MutL | 0.19 | LU632_RS01205 | | class I fumarate hydratase FumA | low | > 74 |
| Rahnella sp. WP5 | 0.24 | EX31_RS08830 | | DNA mismatch repair endonuclease MutL | 0.20 | EX31_RS01160 | | fumarate hydratase | low | > 89 |
| Serratia liquefaciens MT49 | 0.23 | IAI46_01615 | | DNA mismatch repair endonuclease MutL | 0.19 | IAI46_21370 | | fumarate hydratase | low | > 86 |
| Enterobacter asburiae PDN3 | 0.23 | EX28DRAFT_3367 | | DNA mismatch repair protein MutL | 0.19 | EX28DRAFT_1609 | | hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region | low | > 76 |
| Escherichia coli BW25113 | 0.23 | b4170 | mutL | DNA mismatch repair protein (NCBI) | 0.19 | b1612 | fumA | fumarate hydratase (fumarase A), aerobic Class I (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.23 | BNILDI_06960 | mutL | DNA mismatch repair endonuclease MutL | 0.19 | BNILDI_16940 | fumB | class I fumarate hydratase | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_03872 | | DNA mismatch repair protein MutL | 0.19 | OHPLBJKB_03922 | | Fumarate hydratase class I, anaerobic | low | > 73 |
| Escherichia coli ECOR27 | 0.23 | NOLOHH_04530 | mutL | DNA mismatch repair endonuclease MutL | 0.19 | NOLOHH_18150 | fumB | class I fumarate hydratase | low | > 75 |
| Escherichia coli BL21 | 0.23 | ECD_04037 | | methyl-directed mismatch repair protein | 0.19 | ECD_01581 | | fumarate hydratase (fumarase A), aerobic Class I | 0.40 | 24 |
| Escherichia coli Nissle 1917 | 0.23 | ECOLIN_RS24220 | | DNA mismatch repair endonuclease MutL | 0.20 | ECOLIN_RS23850 | | class I fumarate hydratase | low | > 55 |
| Escherichia coli ECOR38 | 0.23 | HEPCGN_10495 | mutL | DNA mismatch repair endonuclease MutL | 0.19 | HEPCGN_11160 | fumB | class I fumarate hydratase | low | > 87 |
| Escherichia fergusonii Becca | 0.23 | EFB2_04365 | | DNA mismatch repair protein MutL | 0.20 | EFB2_04461 | | Fumarate hydratase class I, anaerobic | low | > 86 |
| Escherichia coli ECRC102 | 0.23 | NIAGMN_10115 | mutL | DNA mismatch repair endonuclease MutL | 0.19 | NIAGMN_10370 | fumB | class I fumarate hydratase | — | — |
| Escherichia coli ECRC100 | 0.23 | OKFHMN_12265 | mutL | DNA mismatch repair endonuclease MutL | 0.19 | OKFHMN_12525 | fumB | class I fumarate hydratase | low | > 80 |
| Escherichia coli ECRC99 | 0.23 | KEDOAH_15890 | mutL | DNA mismatch repair endonuclease MutL | 0.19 | KEDOAH_15640 | fumB | class I fumarate hydratase | — | — |
| Escherichia coli ECRC98 | 0.23 | JDDGAC_15905 | mutL | DNA mismatch repair endonuclease MutL | 0.19 | JDDGAC_16160 | fumB | class I fumarate hydratase | low | > 86 |
| Escherichia coli ECRC101 | 0.23 | MCAODC_02780 | mutL | DNA mismatch repair endonuclease MutL | 0.19 | MCAODC_03035 | fumB | class I fumarate hydratase | low | > 87 |
| Vibrio cholerae E7946 ATCC 55056 | 0.23 | CSW01_01825 | | DNA mismatch repair protein MutL | 0.70 | CSW01_06585 | | fumarate hydratase | low | > 62 |
| Shewanella loihica PV-4 | 0.22 | Shew_0564 | | DNA mismatch repair protein MutL (RefSeq) | 0.71 | Shew_1904 | | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit (RefSeq) | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.22 | GFF823 | | DNA mismatch repair protein MutL | 0.19 | GFF1477 | | Fumarate hydratase class I, anaerobic (EC 4.2.1.2) | low | > 78 |
| Shewanella amazonensis SB2B | 0.22 | Sama_3027 | mutL | DNA mismatch repair protein (RefSeq) | 0.70 | Sama_1688 | | fumarate hydratase, class I, anaerobic, putative (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.22 | SO0601 | mutL | DNA mismatch repair protein MutL (NCBI ptt file) | 0.70 | SO2222 | | fumarate hydratase, class I, anaerobic, putative (NCBI ptt file) | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.21 | HMPREF1058_RS02970 | | DNA mismatch repair endonuclease MutL | 0.19 | HMPREF1058_RS13805 | | fumarate hydratase | — | — |
| Bacteroides ovatus ATCC 8483 | 0.20 | BACOVA_00344 | | DNA mismatch repair domain protein | 0.19 | BACOVA_03087 | | hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type | — | — |
| Rhodospirillum rubrum S1H | 0.12 | Rru_A2946 | | DNA mismatch repair protein (NCBI) | 0.20 | Rru_A2206 | | tartrate dehydrogenase (NCBI) | — | — |
Not shown: 7 genomes with orthologs for BPHYT_RS03650 only; 14 genomes with orthologs for BPHYT_RS06985 only