| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Kangiella aquimarina DSM 16071 | 1.0 | B158DRAFT_2215 | | Na+/H+-dicarboxylate symporters | 1.0 | B158DRAFT_1297 | | [LSU ribosomal protein L3P]-glutamine N5-methyltransferase (EC 2.1.1.-) | 0.69 | 2 |
| Alteromonas macleodii MIT1002 | 0.48 | MIT1002_01702 | | Glutamate-aspartate carrier protein | 0.48 | MIT1002_01228 | | 50S ribosomal protein L3 glutamine methyltransferase | low | > 70 |
| Shewanella amazonensis SB2B | 0.45 | Sama_1319 | | symporter for L-glutamate, L-glutamine, and L-aspartate (from data) | 0.54 | Sama_2160 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.45 | Shewana3_1726 | | sodium:dicarboxylate symporter (RefSeq) | 0.54 | Shewana3_1468 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.45 | Shew_2227 | | sodium:dicarboxylate symporter (RefSeq) | 0.54 | Shew_2417 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.44 | SO1948 | | sodium:dicarboxylate symporter family protein (NCBI ptt file) | 0.54 | SO3080 | | hemK family protein (NCBI ptt file) | low | > 76 |
| Pseudomonas stutzeri RCH2 | 0.38 | Psest_4075 | | symporter for L-glutamate, L-glutamine, and L-proline (from data) | 0.52 | Psest_1995 | | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | low | > 67 |
| Vibrio cholerae E7946 ATCC 55056 | 0.27 | CSW01_05920 | | dicarboxylate/amino acid:cation symporter | 0.52 | CSW01_10570 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 62 |
| Acinetobacter radioresistens SK82 | 0.27 | MPMX26_02728 | | Proton/glutamate-aspartate symporter | 0.45 | MPMX26_01339 | | 50S ribosomal protein L3 glutamine methyltransferase | low | > 36 |
| Dyella japonica UNC79MFTsu3.2 | 0.27 | ABZR86_RS00450 | | dicarboxylate/amino acid:cation symporter | 0.43 | ABZR86_RS08050 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 74 |
| Lysobacter sp. OAE881 | 0.27 | ABIE51_RS06350 | | dicarboxylate/amino acid:cation symporter | 0.40 | ABIE51_RS08215 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 62 |
| Erwinia tracheiphila SCR3 | 0.26 | LU632_RS23310 | gltP | glutamate/aspartate:proton symporter GltP | 0.49 | LU632_RS07770 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.26 | HER17_RS14145 | | glutamate/aspartate:proton symporter GltP | 0.50 | HER17_RS06930 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 75 |
| Serratia liquefaciens MT49 | 0.26 | IAI46_01410 | | glutamate/aspartate:proton symporter GltP | 0.51 | IAI46_18030 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 86 |
| Pantoea sp. MT58 | 0.26 | IAI47_17710 | | glutamate/aspartate:proton symporter GltP | 0.51 | IAI47_06145 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 76 |
| Dickeya dianthicola 67-19 | 0.26 | HGI48_RS07365 | | glutamate/aspartate:proton symporter GltP | 0.50 | HGI48_RS14535 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 71 |
| Dickeya dianthicola ME23 | 0.25 | DZA65_RS07875 | | glutamate/aspartate:proton symporter GltP | 0.50 | DZA65_RS15470 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 75 |
| Dickeya dadantii 3937 | 0.25 | DDA3937_RS07490 | | glutamate/aspartate:proton symporter GltP | 0.51 | DDA3937_RS14585 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.25 | Xcc-8004.1894.1 | | Proton/glutamate symport protein @ Sodium/glutamate symport protein | 0.40 | Xcc-8004.1953.1 | | Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p | low | > 74 |
| Escherichia coli ECRC98 | 0.25 | JDDGAC_16420 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | JDDGAC_26570 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 86 |
| Escherichia coli ECRC102 | 0.25 | NIAGMN_10630 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | NIAGMN_20385 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | — | — |
| Escherichia coli ECRC100 | 0.25 | OKFHMN_12785 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | OKFHMN_22610 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 80 |
| Escherichia coli BL21 | 0.25 | ECD_03949 | | glutamate/aspartate:proton symporter | 0.52 | ECD_02255 | | N5-glutamine methyltransferase | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.25 | OHPLBJKB_03963 | | Proton/glutamate-aspartate symporter | 0.53 | OHPLBJKB_01375 | | 50S ribosomal protein L3 glutamine methyltransferase | low | > 73 |
| Escherichia fergusonii Becca | 0.25 | EFB2_04512 | | Proton/glutamate-aspartate symporter | 0.53 | EFB2_01528 | | 50S ribosomal protein L3 glutamine methyltransferase | low | > 86 |
| Escherichia coli ECRC99 | 0.25 | KEDOAH_15365 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | KEDOAH_05585 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | — | — |
| Escherichia coli ECRC62 | 0.25 | BNILDI_06490 | gltP | glutamate/aspartate:proton symporter GltP | 0.52 | BNILDI_13165 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 75 |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_05035 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | NOLOHH_14245 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 75 |
| Escherichia coli ECOR38 | 0.25 | HEPCGN_11410 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | HEPCGN_21815 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 87 |
| Escherichia coli Nissle 1917 | 0.25 | ECOLIN_RS23590 | | glutamate/aspartate:proton symporter GltP | 0.53 | ECOLIN_RS13495 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 55 |
| Escherichia coli ECRC101 | 0.25 | MCAODC_03295 | gltP | glutamate/aspartate:proton symporter GltP | 0.53 | MCAODC_13650 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 87 |
| Escherichia coli BW25113 | 0.25 | b4077 | gltP | glutamate/aspartate:proton symporter (NCBI) | 0.53 | b2330 | yfcB | putative adenine-specific methylase (VIMSS) | low | > 76 |
| Enterobacter asburiae PDN3 | 0.25 | EX28DRAFT_4231 | | Na+/H+-dicarboxylate symporters | 0.52 | EX28DRAFT_0274 | | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.25 | GFF1460 | | Glutamate-aspartate carrier protein | 0.53 | GFF1951 | | Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p | low | > 78 |
| Enterobacter sp. TBS_079 | 0.24 | MPMX20_00292 | | Proton/glutamate-aspartate symporter | 0.52 | MPMX20_03265 | | 50S ribosomal protein L3 glutamine methyltransferase | low | > 85 |
| Klebsiella michiganensis M5al | 0.24 | BWI76_RS02105 | | glutamate/aspartate:proton symporter GltP | 0.51 | BWI76_RS20440 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 92 |
| Pseudomonas simiae WCS417 | 0.24 | PS417_00470 | | glutamate:protein symporter | 0.52 | PS417_19330 | | SAM-dependent methyltransferase | — | — |
| Pseudomonas fluorescens SBW25 | 0.24 | PFLU_RS00460 | | glutamate/aspartate:proton symporter GltP | 0.52 | PFLU_RS21295 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.24 | PFLU_RS00460 | | glutamate/aspartate:proton symporter GltP | 0.52 | PFLU_RS21295 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 109 |
| Pseudomonas putida KT2440 | 0.24 | PP_0137 | | glutamate/aspartate-proton DAACS transporter | 0.52 | PP_1827 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.24 | Psyr_0174 | | Sodium:dicarboxylate symporter | 0.51 | Psyr_1850 | | [LSU ribosomal protein L3P]-glutamine N5-methyltransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.24 | Psyr_0174 | | Sodium:dicarboxylate symporter | 0.51 | Psyr_1850 | | [LSU ribosomal protein L3P]-glutamine N5-methyltransferase | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_578 | | Glutamate-aspartate carrier protein | 0.53 | PfGW456L13_4168 | | Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.23 | AO353_10990 | | glutamate:protein symporter | 0.52 | AO353_02265 | | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.23 | AO356_11400 | | glutamate:protein symporter | 0.51 | AO356_19525 | | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.23 | Pf6N2E2_4148 | | Glutamate-aspartate carrier protein | 0.51 | Pf6N2E2_5819 | | Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.23 | Pf1N1B4_1888 | | Glutamate-aspartate carrier protein | 0.52 | Pf1N1B4_3777 | | Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p | low | > 87 |
| Pseudomonas sp. RS175 | 0.23 | PFR28_04638 | | Proton/glutamate-aspartate symporter | 0.51 | PFR28_03129 | | 50S ribosomal protein L3 glutamine methyltransferase | low | > 88 |
| Azospirillum sp. SherDot2 | 0.22 | MPMX19_03595 | | C4-dicarboxylate transport protein 2 | 0.38 | MPMX19_00751 | | 50S ribosomal protein L3 glutamine methyltransferase | low | > 112 |
| Azospirillum brasilense Sp245 | 0.22 | AZOBR_RS21140 | | C4-dicarboxylate ABC transporter | 0.39 | AZOBR_RS10950 | | SAM-dependent methyltransferase | low | > 97 |
| Cupriavidus basilensis FW507-4G11 | 0.21 | RR42_RS26130 | | C4-dicarboxylate ABC transporter | 0.35 | RR42_RS11955 | | SAM-dependent methyltransferase | low | > 128 |
| Castellaniella sp019104865 MT123 | 0.21 | ABCV34_RS02715 | | dicarboxylate/amino acid:cation symporter | 0.39 | ABCV34_RS05175 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 48 |
| Herbaspirillum seropedicae SmR1 | 0.21 | HSERO_RS19090 | | C4-dicarboxylate ABC transporter | 0.39 | HSERO_RS10785 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | low | > 78 |
| Rahnella sp. WP5 | 0.21 | EX31_RS05445 | | dicarboxylate/amino acid:cation symporter | 0.51 | EX31_RS19690 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 89 |
| Variovorax sp. SCN45 | 0.21 | GFF5354 | | C4-dicarboxylate transport protein | 0.33 | GFF258 | | Ribosomal protein L3 N(5)-glutamine methyltransferase (EC 2.1.1.298) | low | > 127 |
| Dechlorosoma suillum PS | 0.21 | Dsui_3158 | | Na+/H+ dicarboxylate symporter | 0.40 | Dsui_2712 | | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | low | > 51 |
| Acidovorax sp. GW101-3H11 | 0.20 | Ac3H11_719 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate | 0.32 | Ac3H11_2299 | | Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p | low | > 79 |
| Pseudomonas sp. S08-1 | 0.20 | OH686_20585 | | Na+/H+-dicarboxylate symporter | 0.53 | OH686_00665 | | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | low | > 80 |
| Variovorax sp. OAS795 | 0.20 | ABID97_RS23115 | | dicarboxylate/amino acid:cation symporter | 0.31 | ABID97_RS16650 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 91 |
| Rhodopseudomonas palustris CGA009 | 0.19 | TX73_012660 | | dicarboxylate/amino acid:cation symporter | 0.33 | TX73_005990 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 86 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.19 | H281DRAFT_02039 | | aerobic C4-dicarboxylate transport protein | 0.35 | H281DRAFT_00596 | | [LSU ribosomal protein L3P]-glutamine N5-methyltransferase | low | > 103 |
| Ralstonia sp. UNC404CL21Col | 0.19 | ABZR87_RS06625 | | dicarboxylate/amino acid:cation symporter | 0.37 | ABZR87_RS11740 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 80 |
| Ralstonia solanacearum UW163 | 0.19 | UW163_RS02795 | | dicarboxylate/amino acid:cation symporter | 0.37 | UW163_RS13620 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | — | — |
| Burkholderia phytofirmans PsJN | 0.19 | BPHYT_RS02510 | | C4-dicarboxylate ABC transporter | 0.34 | BPHYT_RS12205 | | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase | low | > 109 |
| Ralstonia solanacearum GMI1000 | 0.19 | RS_RS01625 | | C4-dicarboxylate transporter 1 | 0.37 | RS_RS06960 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.19 | RALBFv3_RS10785 | | dicarboxylate/amino acid:cation symporter | 0.37 | RALBFv3_RS00290 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 76 |
| Paraburkholderia sabiae LMG 24235 | 0.19 | QEN71_RS26995 | | C4-dicarboxylate transporter DctA | 0.35 | QEN71_RS06350 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 153 |
| Ralstonia solanacearum PSI07 | 0.19 | RPSI07_RS14855 | | dicarboxylate/amino acid:cation symporter | 0.37 | RPSI07_RS17185 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 81 |
| Paraburkholderia graminis OAS925 | 0.19 | ABIE53_004012 | | aerobic C4-dicarboxylate transport protein | 0.36 | ABIE53_002520 | | ribosomal protein L3 glutamine methyltransferase | low | > 113 |
| Rhodanobacter sp. FW510-T8 | 0.18 | OKGIIK_06560 | gltP | dicarboxylate/amino acid:cation symporter | 0.43 | OKGIIK_04795 | prmB | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.18 | LRK55_RS00475 | | dicarboxylate/amino acid:cation symporter | 0.43 | LRK55_RS01515 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.18 | LRK54_RS00700 | | dicarboxylate/amino acid:cation symporter | 0.43 | LRK54_RS01735 | | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | low | > 59 |
Not shown: 14 genomes with orthologs for B158DRAFT_2215 only; 2 genomes with orthologs for B158DRAFT_1297 only