Conservation of cofitness between Atu0205 and Atu1780 in Agrobacterium fabrum C58

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0205 methylmalonate-semialdehyde dehydrogenase 1.0 Atu1780 ATP-dependent DNA helicase 0.36 11
Rhizobium sp. OAE497 0.88 ABIE40_RS03335 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.81 ABIE40_RS09300 ATP-dependent DNA helicase RecG low > 107
Sinorhizobium meliloti 1021 0.84 SMc00781 malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data) 0.77 SMc00228 ATP-dependent DNA helicase RecG low > 103
Rhodopseudomonas palustris CGA009 0.72 TX73_017860 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.51 TX73_013795 ATP-dependent DNA helicase RecG low > 86
Bosea sp. OAE506 0.71 ABIE41_RS23920 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.50 ABIE41_RS15815 ATP-dependent DNA helicase RecG low > 77
Azospirillum sp. SherDot2 0.71 MPMX19_05423 Putative 3-oxopropanoate dehydrogenase 0.56 MPMX19_00951 ATP-dependent DNA helicase RecG — —
Rhodospirillum rubrum S1H 0.66 Rru_A2071 Methylmalonate-semialdehyde dehydrogenase (NCBI) 0.45 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI) — —
Dinoroseobacter shibae DFL-12 0.66 Dshi_1747 methylmalonate-semialdehyde dehydrogenase (RefSeq) 0.47 Dshi_1510 DEAD/DEAH box helicase domain protein (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.65 PGA1_c17300 methylmalonate-semialdehyde dehydrogenase 0.47 PGA1_c14380 ATP-dependent DNA helicase RecG low > 62
Mycobacterium tuberculosis H37Rv 0.65 Rv0753c Probable methylmalonate-semialdehyde dehydrogenase MmsA (methylmalonic acid semialdehyde dehydrogenase) (MMSDH) 0.24 Rv2973c Probable ATP-dependent DNA helicase RecG low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.63 A4249_RS03580 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.41 A4249_RS04765 ATP-dependent DNA helicase RecG low > 48
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_3677 methylmalonic acid semialdehyde dehydrogenase 0.42 Ga0059261_0958 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 68
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02357 methylmalonic acid semialdehyde dehydrogenase 0.42 CCNA_01504 ATP-dependent DNA helicase recG low > 67
Caulobacter crescentus NA1000 0.61 CCNA_02357 methylmalonic acid semialdehyde dehydrogenase 0.42 CCNA_01504 ATP-dependent DNA helicase recG low > 66
Alteromonas macleodii MIT1002 0.60 MIT1002_03326 Methylmalonate-semialdehyde dehydrogenase [acylating] 0.32 MIT1002_00111 ATP-dependent DNA helicase RecG low > 70
Shewanella loihica PV-4 0.59 Shew_0965 methylmalonate-semialdehyde dehydrogenase (RefSeq) 0.33 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) low > 60
Shewanella amazonensis SB2B 0.59 Sama_2650 methylmalonate-semialdehyde dehydrogenase (RefSeq) 0.34 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) low > 62
Paraburkholderia graminis OAS925 0.57 ABIE53_005233 malonate-semialdehyde dehydrogenase (acetylating)/methylmalonate-semialdehyde dehydrogenase 0.32 ABIE53_000833 ATP-dependent DNA helicase RecG low > 113
Shewanella sp. ANA-3 0.57 Shewana3_3107 methylmalonate-semialdehyde dehydrogenase [acylating] (RefSeq) 0.33 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_03264 methylmalonate-semialdehyde dehydrogenase [acylating] 0.32 H281DRAFT_04672 ATP-dependent DNA helicase RecG low > 103
Pseudomonas stutzeri RCH2 0.56 Psest_3781 methylmalonic acid semialdehyde dehydrogenase 0.34 Psest_4192 ATP-dependent DNA helicase RecG — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_0679 methylmalonate-semialdehyde dehydrogenase (acylating) 0.33 Psyr_0201 ATP-dependent DNA helicase RecG low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_0679 methylmalonate-semialdehyde dehydrogenase (acylating) 0.33 Psyr_0201 ATP-dependent DNA helicase RecG low > 86
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS03330 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.35 PFLU_RS29550 ATP-dependent DNA helicase RecG low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS03330 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.35 PFLU_RS29550 ATP-dependent DNA helicase RecG low > 109
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS28825 methylmalonate-semialdehyde dehydrogenase 0.33 BPHYT_RS03400 ATP-dependent DNA helicase RecG low > 109
Pseudomonas putida KT2440 0.55 PP_0597 methylmalonate-semialdehyde dehydrogenase 0.34 PP_5310 junction-specific ATP-dependent DNA helicase low > 96
Castellaniella sp019104865 MT123 0.55 ABCV34_RS07430 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.30 ABCV34_RS03570 ATP-dependent DNA helicase RecG low > 48
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_1238 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.34 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 87
Pseudomonas simiae WCS417 0.55 PS417_03250 methylmalonate-semialdehyde dehydrogenase 0.35 PS417_27870 ATP-dependent DNA helicase RecG low > 88
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_06080 methylmalonate-semialdehyde dehydrogenase 0.35 AO353_09320 ATP-dependent DNA helicase RecG low > 101
Dickeya dadantii 3937 0.55 DDA3937_RS03670 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.34 DDA3937_RS00170 ATP-dependent DNA helicase RecG low > 74
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_2 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.35 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_07950 methylmalonate-semialdehyde dehydrogenase 0.34 AO356_12380 ATP-dependent DNA helicase RecG low > 104
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_3462 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.34 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 103
Dickeya dianthicola ME23 0.54 DZA65_RS03855 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.34 DZA65_RS22160 ATP-dependent DNA helicase RecG low > 75
Pseudomonas sp. RS175 0.54 PFR28_05263 Putative 3-oxopropanoate dehydrogenase 0.34 PFR28_04435 ATP-dependent DNA helicase RecG low > 88
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS29405 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.32 QEN71_RS26630 ATP-dependent DNA helicase RecG — —
Dickeya dianthicola 67-19 0.54 HGI48_RS03730 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.34 HGI48_RS21190 ATP-dependent DNA helicase RecG low > 71
Azospirillum brasilense Sp245 0.54 AZOBR_RS22500 methylmalonate-semialdehyde dehydrogenase 0.56 AZOBR_RS09850 ATP-dependent DNA helicase RecG 0.30 55
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS01580 methylmalonate-semialdehyde dehydrogenase 0.32 RR42_RS17390 ATP-dependent DNA helicase RecG low > 128
Enterobacter sp. TBS_079 0.54 MPMX20_03375 Putative 3-oxopropanoate dehydrogenase 0.34 MPMX20_00084 ATP-dependent DNA helicase RecG low > 85
Ralstonia solanacearum GMI1000 0.54 RS_RS22225 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.32 RS_RS13565 DNA helicase RecG — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS04870 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.32 RPSI07_RS11625 DNA helicase RecG low > 81
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS19665 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.32 ABZR87_RS01270 ATP-dependent DNA helicase RecG low > 80
Ralstonia solanacearum UW163 0.53 UW163_RS20405 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.32 UW163_RS07950 DNA helicase RecG — —
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS18725 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.32 RALBFv3_RS05675 DNA helicase RecG low > 76
Pseudomonas sp. S08-1 0.53 OH686_07305 methylmalonate-semialdehyde dehydrogenase (acylating) 0.34 OH686_13505 ATP-dependent DNA helicase RecG low > 80
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS23245 methylmalonate-semialdehyde dehydrogenase 0.32 HSERO_RS06165 ATP-dependent DNA helicase RecG low > 78
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF888 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) 0.34 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF1895 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.31 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 90
Enterobacter asburiae PDN3 0.53 EX28DRAFT_0147 methylmalonic acid semialdehyde dehydrogenase 0.34 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 76
Pectobacterium carotovorum WPP14 0.53 HER17_RS14440 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.33 HER17_RS21395 ATP-dependent DNA helicase RecG low > 75
Acidovorax sp. GW101-3H11 0.52 Ac3H11_4340 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.31 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 79
Marinobacter adhaerens HP15 0.51 HP15_2655 methylmalonate-semialdehyde dehydrogenase 0.35 HP15_309 DNA helicase, ATP-dependent, RecG low > 73
Serratia liquefaciens MT49 0.51 IAI46_24020 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.33 IAI46_24905 ATP-dependent DNA helicase RecG low > 86
Klebsiella michiganensis M5al 0.50 BWI76_RS03070 Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) (from data) 0.33 BWI76_RS27440 DNA helicase RecG low > 92
Pantoea sp. MT58 0.50 IAI47_01465 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.34 IAI47_00500 ATP-dependent DNA helicase RecG low > 76
Erwinia tracheiphila SCR3 0.50 LU632_RS02350 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.34 LU632_RS22190 recG ATP-dependent DNA helicase RecG 0.52 32
Acinetobacter radioresistens SK82 0.46 MPMX26_01550 Methylmalonate-semialdehyde dehydrogenase [acylating] 0.36 MPMX26_02732 ATP-dependent DNA helicase RecG — —
Shewanella oneidensis MR-1 0.44 SO1678 mmsA methylmalonate-semialdehyde dehydrogenase (NCBI ptt file) 0.33 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) low > 76
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.3689.1 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.34 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 74

Not shown: 2 genomes with orthologs for Atu0205 only; 34 genomes with orthologs for Atu1780 only