Conservation of cofitness between Atu4096 and Atu1589 in Agrobacterium fabrum C58

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu4096 nicotinate-nucleotide pyrophosphorylase 1.0 Atu1589 aminotransferase, class I 0.79 14
Rhizobium sp. OAE497 0.82 ABIE40_RS23265 carboxylating nicotinate-nucleotide diphosphorylase 0.94 ABIE40_RS08645 LL-diaminopimelate aminotransferase 0.57 38
Azospirillum sp. SherDot2 0.56 MPMX19_05672 putative nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.65 MPMX19_00804 Glutamate-pyruvate aminotransferase AlaC
Caulobacter crescentus NA1000 0.53 CCNA_03009 nicotinate-nucleotide pyrophosphorylase 0.66 CCNA_01446 LL-diaminopimelate aminotransferase
Caulobacter crescentus NA1000 Δfur 0.53 CCNA_03009 nicotinate-nucleotide pyrophosphorylase 0.66 CCNA_01446 LL-diaminopimelate aminotransferase
Rhodospirillum rubrum S1H 0.53 Rru_A1432 Nicotinate-nucleotide pyrophosphorylase (NCBI) 0.66 Rru_A2411 Aminotransferase, class I and II (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.51 TX73_005415 carboxylating nicotinate-nucleotide diphosphorylase 0.74 TX73_012935 LL-diaminopimelate aminotransferase
Brevundimonas sp. GW460-12-10-14-LB2 0.49 A4249_RS00635 carboxylating nicotinate-nucleotide diphosphorylase 0.61 A4249_RS02425 LL-diaminopimelate aminotransferase low > 48
Sinorhizobium meliloti 1021 0.49 SMc02598 nicotinate-nucleotide pyrophosphorylase carboxylating protein 0.94 SMc00294 aminotransferase low > 103
Magnetospirillum magneticum AMB-1 0.48 AMB_RS19655 nicotinate-nucleotide diphosphorylase (carboxylating) 0.65 AMB_RS18860 pyridoxal phosphate-dependent aminotransferase
Bosea sp. OAE506 0.42 ABIE41_RS02500 carboxylating nicotinate-nucleotide diphosphorylase 0.77 ABIE41_RS19175 LL-diaminopimelate aminotransferase low > 77
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS21245 nicotinate-nucleotide pyrophosphorylase 0.50 RR42_RS28540 glutamate--pyruvate aminotransferase low > 128
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS15940 carboxylating nicotinate-nucleotide diphosphorylase 0.30 HMPREF1058_RS14790 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS11900 carboxylating nicotinate-nucleotide diphosphorylase 0.30 ABI39_RS10505 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_16940 nicotinate-nucleotide diphosphorylase (carboxylating) 0.19 CA264_01550 aminotransferase
Mycobacterium tuberculosis H37Rv 0.40 Rv1596 Probable nicotinate-nucleotide pyrophosphatase NadC 0.15 Rv1178 Probable aminotransferase
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_0061 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.62 Ga0059261_1288 Aspartate/tyrosine/aromatic aminotransferase
Bifidobacterium breve UCC2003 0.40 BBR_RS16720 nicotinate-nucleotide diphosphorylase (carboxylating) 0.27 BBR_RS13460 aminotransferase low > 34
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF1217 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.18 GFF4553 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) low > 90
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS16725 carboxylating nicotinate-nucleotide diphosphorylase 0.29 HMPREF1078_RS01130 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.50 Psyr_0468 Aminotransferase, class I and II low > 86
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.50 Psyr_0468 Aminotransferase, class I and II low > 86
Bacteroides ovatus ATCC 8483 0.38 BACOVA_04303 nicotinate-nucleotide diphosphorylase (carboxylating) 0.27 BACOVA_01161 aminotransferase, class I/II 0.82 48
Bacteroides stercoris CC31F 0.38 HMPREF1181_RS10745 carboxylating nicotinate-nucleotide diphosphorylase 0.28 HMPREF1181_RS06565 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Pseudomonas simiae WCS417 0.38 PS417_03925 nicotinate-nucleotide pyrophosphorylase 0.50 PS417_21975 glutamate-pyruvate aminotransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_1153 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.50 Pf1N1B4_555 Uncharacterized PLP-dependent aminotransferase YfdZ low > 87
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS00350 carboxylating nicotinate-nucleotide diphosphorylase 0.19 ABZR87_RS11770 succinyldiaminopimelate transaminase low > 80
Bacteroides thetaiotaomicron VPI-5482 0.38 BT1560 nicotinate-nucleotide pyrophosphorylase (NCBI ptt file) 0.26 BT3935 aminotransferase (NCBI ptt file)
Pseudomonas sp. RS175 0.38 PFR28_00098 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.50 PFR28_00596 Glutamate-pyruvate aminotransferase AlaC low > 88
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.49 PFLU_RS23580 alanine transaminase low > 109
Pseudomonas fluorescens SBW25 0.38 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.49 PFLU_RS23580 alanine transaminase low > 109
Dechlorosoma suillum PS 0.37 Dsui_2901 nicotinate-nucleotide pyrophosphorylase 0.51 Dsui_2909 aspartate/tyrosine/aromatic aminotransferase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF130 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.50 GFF1970 Uncharacterized PLP-dependent aminotransferase YfdZ low > 78
Dickeya dadantii 3937 0.37 DDA3937_RS17955 carboxylating nicotinate-nucleotide diphosphorylase 0.50 DDA3937_RS14825 alanine transaminase low > 74
Pseudomonas stutzeri RCH2 0.37 Psest_0718 nicotinate-nucleotide pyrophosphorylase 0.15 Psest_1470 succinyldiaminopimelate transaminase low > 67
Pseudomonas putida KT2440 0.36 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer 0.49 PP_0817 aminotransferase low > 96
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS04730 nicotinate-nucleotide diphosphorylase (carboxylating) 0.18 RALBFv3_RS00320 succinyldiaminopimelate transaminase low > 76
Ralstonia solanacearum UW163 0.36 UW163_RS08940 nicotinate-nucleotide diphosphorylase (carboxylating) 0.18 UW163_RS13650 succinyldiaminopimelate transaminase
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_05520 nicotinate-nucleotide pyrophosphorylase 0.50 AO353_03235 glutamate-pyruvate aminotransferase low > 101
Echinicola vietnamensis KMM 6221, DSM 17526 0.36 Echvi_1158 nicotinate-nucleotide pyrophosphorylase 0.26 Echvi_0124 Aspartate/tyrosine/aromatic aminotransferase low > 79
Acidovorax sp. GW101-3H11 0.36 Ac3H11_3838 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.51 Ac3H11_3720 Uncharacterized PLP-dependent aminotransferase YfdZ low > 79
Dickeya dianthicola 67-19 0.36 HGI48_RS17890 carboxylating nicotinate-nucleotide diphosphorylase 0.50 HGI48_RS14755 alanine transaminase low > 71
Ralstonia solanacearum PSI07 0.36 RPSI07_RS12655 nicotinate-nucleotide diphosphorylase (carboxylating) 0.18 RPSI07_RS17155 succinyldiaminopimelate transaminase low > 81
Dickeya dianthicola ME23 0.35 DZA65_RS19035 carboxylating nicotinate-nucleotide diphosphorylase 0.49 DZA65_RS15705 alanine transaminase low > 75
Pectobacterium carotovorum WPP14 0.35 HER17_RS03250 carboxylating nicotinate-nucleotide diphosphorylase 0.50 HER17_RS06655 alanine transaminase low > 75
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_5082 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.50 PfGW456L13_1928 Uncharacterized PLP-dependent aminotransferase YfdZ low > 87
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_07370 nicotinate-nucleotide pyrophosphorylase 0.50 AO356_05050 glutamate-pyruvate aminotransferase low > 104
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS03065 carboxylating nicotinate-nucleotide diphosphorylase 0.17 QEN71_RS06370 succinyldiaminopimelate transaminase low > 153
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_3346 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.50 Pf6N2E2_2862 Uncharacterized PLP-dependent aminotransferase YfdZ low > 103
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS11070 nicotinate-nucleotide pyrophosphorylase 0.52 HSERO_RS12800 aspartate aminotransferase low > 78
Pseudomonas sp. S08-1 0.35 OH686_16520 nicotinate-nucleotide diphosphorylase (carboxylating) 0.49 OH686_04000 Glutamate-pyruvate aminotransferase AlaC low > 80
Enterobacter asburiae PDN3 0.35 EX28DRAFT_3702 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.50 EX28DRAFT_0240 Aspartate/tyrosine/aromatic aminotransferase low > 76
Castellaniella sp019104865 MT123 0.34 ABCV34_RS03695 carboxylating nicotinate-nucleotide diphosphorylase 0.52 ABCV34_RS02290 alanine transaminase 0.31 40
Ralstonia solanacearum GMI1000 0.34 RS_RS12290 nicotinate-nucleotide diphosphorylase (carboxylating) 0.18 RS_RS06990 succinyldiaminopimelate transaminase low > 80
Klebsiella michiganensis M5al 0.34 BWI76_RS04845 nicotinate-nucleotide pyrophosphorylase 0.50 BWI76_RS20495 alanine transaminase low > 92
Enterobacter sp. TBS_079 0.34 MPMX20_00800 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.50 MPMX20_03277 Glutamate-pyruvate aminotransferase AlaC low > 85
Rahnella sp. WP5 0.34 EX31_RS03515 carboxylating nicotinate-nucleotide diphosphorylase 0.49 EX31_RS20015 alanine transaminase low > 89
Variovorax sp. OAS795 0.34 ABID97_RS07410 carboxylating nicotinate-nucleotide diphosphorylase 0.16 ABID97_RS16630 succinyldiaminopimelate transaminase low > 91
Escherichia coli ECOR27 0.33 NOLOHH_02875 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.49 NOLOHH_14055 alaC alanine transaminase low > 57
Escherichia coli BW25113 0.33 b0109 nadC nicotinate-nucleotide pyrophosphorylase (NCBI) 0.49 b2379 yfdZ hypothetical protein (NCBI) low > 76
Escherichia coli BL21 0.33 ECD_00108 quinolinate phosphoribosyltransferase 0.49 ECD_02289 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_03552 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.49 OHPLBJKB_01342 Glutamate-pyruvate aminotransferase AlaC low > 73
Variovorax sp. SCN45 0.33 GFF2574 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.16 GFF254 N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17), type 2 low > 127
Escherichia coli ECRC102 0.33 NIAGMN_08380 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.49 NIAGMN_20145 alaC alanine transaminase
Escherichia coli ECOR38 0.33 HEPCGN_08510 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.49 HEPCGN_21580 alaC alanine transaminase low > 85
Escherichia coli Nissle 1917 0.33 ECOLIN_RS00585 carboxylating nicotinate-nucleotide diphosphorylase 0.49 ECOLIN_RS13690 alanine transaminase low > 52
Escherichia fergusonii Becca 0.33 EFB2_03940 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.49 EFB2_01495 Glutamate-pyruvate aminotransferase AlaC low > 86
Escherichia coli ECRC62 0.33 BNILDI_08735 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.49 BNILDI_12910 alaC alanine transaminase
Escherichia coli ECRC101 0.33 MCAODC_01045 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.49 MCAODC_12900 alaC alanine transaminase
Escherichia coli ECRC101 0.33 OKFHMN_10530 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.49 OKFHMN_22370 alaC alanine transaminase
Escherichia coli ECRC98 0.33 JDDGAC_14125 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.49 JDDGAC_26335 alaC alanine transaminase
Escherichia coli ECRC99 0.33 KEDOAH_17625 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.49 KEDOAH_05850 alaC alanine transaminase
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_0951 nadC nicotinate-nucleotide pyrophosphorylase 0.34 Synpcc7942_1794 succinyldiaminopimelate transaminase low > 38
Acinetobacter radioresistens SK82 0.32 MPMX26_00042 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.19 MPMX26_01868 LL-diaminopimelate aminotransferase low > 36
Serratia liquefaciens MT49 0.32 IAI46_03530 carboxylating nicotinate-nucleotide diphosphorylase 0.50 IAI46_18180 alanine transaminase low > 86
Pantoea sp. MT58 0.32 IAI47_15845 carboxylating nicotinate-nucleotide diphosphorylase 0.51 IAI47_05575 alanine transaminase low > 76
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU1807 nadC nicotinate-nucleotide pyrophosphorylase (TIGR) 0.52 DVU0891 aminotransferase, classes I and II (TIGR)
Methanococcus maripaludis S2 0.30 MMP_RS04560 carboxylating nicotinate-nucleotide diphosphorylase 0.22 MMP_RS07845 LL-diaminopimelate aminotransferase
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_0524 nicotinate-nucleotide pyrophosphorylase (RefSeq) 0.53 DvMF_1411 aminotransferase class I and II (RefSeq)
Methanococcus maripaludis JJ 0.29 MMJJ_RS00575 carboxylating nicotinate-nucleotide diphosphorylase 0.23 MMJJ_RS06510 LL-diaminopimelate aminotransferase

Not shown: 20 genomes with orthologs for Atu4096 only; 2 genomes with orthologs for Atu1589 only