Conservation of cofitness between ABZR86_RS08395 and ABZR86_RS14985 in Dyella japonica UNC79MFTsu3.2

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dyella japonica UNC79MFTsu3.2 1.0 ABZR86_RS08395 glycine C-acetyltransferase 1.0 ABZR86_RS14985 shikimate dehydrogenase 0.58 15
Rhodanobacter denitrificans MT42 0.88 LRK55_RS00430 glycine C-acetyltransferase 0.73 LRK55_RS08360 shikimate dehydrogenase low > 63
Rhodanobacter denitrificans FW104-10B01 0.88 LRK54_RS00660 glycine C-acetyltransferase 0.73 LRK54_RS08595 shikimate dehydrogenase 0.43 22
Rhodanobacter sp. FW510-T8 0.86 OKGIIK_06595 kbl glycine C-acetyltransferase 0.72 OKGIIK_15365 aroE shikimate dehydrogenase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.82 Xcc-8004.4088.1 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.52 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 74
Lysobacter sp. OAE881 0.81 ABIE51_RS06135 glycine C-acetyltransferase 0.44 ABIE51_RS01815 shikimate dehydrogenase low > 62
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_0286 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.30 B158DRAFT_0259 shikimate 5-dehydrogenase low > 40
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_18570 glycine C-acetyltransferase 0.37 CSW01_00280 shikimate dehydrogenase low > 62
Shewanella loihica PV-4 0.65 Shew_3709 2-amino-3-ketobutyrate coenzyme A ligase (RefSeq) 0.38 Shew_3727 shikimate 5-dehydrogenase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.65 Sama_0098 2-amino-3-ketobutyrate coenzyme A ligase (RefSeq) 0.35 Sama_0052 shikimate dehydrogenase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.64 MIT1002_00063 2-amino-3-ketobutyrate coenzyme A ligase 0.26 MIT1002_00029 Shikimate dehydrogenase — —
Shewanella sp. ANA-3 0.64 Shewana3_4104 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.38 Shewana3_0043 aroE shikimate 5-dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.64 SO4674 kbl 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) 0.36 SO0040 aroE shikimate 5-dehydrogenase (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS28295 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.27 RR42_RS17645 shikimate dehydrogenase low > 128
Rahnella sp. WP5 0.64 EX31_RS14390 glycine C-acetyltransferase 0.36 EX31_RS15950 shikimate dehydrogenase — —
Enterobacter sp. TBS_079 0.64 MPMX20_00115 2-amino-3-ketobutyrate coenzyme A ligase 0.35 MPMX20_04189 Shikimate dehydrogenase (NADP(+)) low > 85
Enterobacter asburiae PDN3 0.64 EX28DRAFT_3870 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.36 EX28DRAFT_0046 shikimate dehydrogenase low > 76
Klebsiella michiganensis M5al 0.64 BWI76_RS27255 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.35 BWI76_RS25645 shikimate dehydrogenase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF393 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.36 GFF2397 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 78
Escherichia coli ECRC99 0.63 KEDOAH_12440 kbl glycine C-acetyltransferase 0.36 KEDOAH_10585 aroE shikimate dehydrogenase — —
Escherichia coli ECRC62 0.63 BNILDI_03925 kbl glycine C-acetyltransferase 0.36 BNILDI_02165 aroE shikimate dehydrogenase low > 75
Escherichia coli ECRC100 0.63 OKFHMN_15710 kbl glycine C-acetyltransferase 0.36 OKFHMN_17565 aroE shikimate dehydrogenase low > 80
Escherichia coli ECRC98 0.63 JDDGAC_19335 kbl glycine C-acetyltransferase 0.36 JDDGAC_21185 aroE shikimate dehydrogenase low > 86
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS19395 glycine C-acetyltransferase 0.30 RALBFv3_RS05945 shikimate dehydrogenase low > 76
Escherichia coli ECRC101 0.63 MCAODC_06220 kbl glycine C-acetyltransferase 0.36 MCAODC_08085 aroE shikimate dehydrogenase low > 87
Escherichia coli ECRC102 0.63 NIAGMN_13470 kbl glycine C-acetyltransferase 0.36 NIAGMN_15325 aroE shikimate dehydrogenase — —
Escherichia coli BW25113 0.63 b3617 kbl 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) 0.36 b3281 aroE dehydroshikimate reductase, NAD(P)-binding (NCBI) low > 76
Escherichia coli ECOR38 0.63 HEPCGN_14550 kbl glycine C-acetyltransferase 0.36 HEPCGN_16385 aroE shikimate dehydrogenase low > 87
Escherichia coli ECOR27 0.63 NOLOHH_07590 kbl glycine C-acetyltransferase 0.36 NOLOHH_09355 aroE shikimate dehydrogenase low > 75
Escherichia coli Nissle 1917 0.63 ECOLIN_RS20640 glycine C-acetyltransferase 0.37 ECOLIN_RS18840 shikimate dehydrogenase low > 55
Bacteroides stercoris CC31F 0.63 HMPREF1181_RS10950 glycine C-acetyltransferase 0.13 HMPREF1181_RS06320 shikimate dehydrogenase low > 56
Ralstonia solanacearum GMI1000 0.63 RS_RS21750 glycine C-acetyltransferase 0.30 RS_RS13890 shikimate dehydrogenase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_00082 2-amino-3-ketobutyrate coenzyme A ligase 0.36 OHPLBJKB_00422 Shikimate dehydrogenase (NADP(+)) 0.51 4
Escherichia coli BL21 0.63 ECD_03475 glycine C-acetyltransferase 0.36 ECD_03132 dehydroshikimate reductase, NAD(P)-binding low > 61
Serratia liquefaciens MT49 0.63 IAI46_24730 glycine C-acetyltransferase 0.37 IAI46_23240 shikimate dehydrogenase low > 86
Escherichia fergusonii Becca 0.63 EFB2_00193 2-amino-3-ketobutyrate coenzyme A ligase 0.37 EFB2_00542 Shikimate dehydrogenase (NADP(+)) low > 86
Pantoea sp. MT58 0.62 IAI47_00695 glycine C-acetyltransferase 0.40 IAI47_02315 shikimate dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_03587 2-amino-3-ketobutyrate coenzyme A ligase 0.33 H281DRAFT_01679 shikimate dehydrogenase (EC 1.1.1.25) low > 103
Bacteroides thetaiotaomicron VPI-5482 0.62 BT1371 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) 0.15 BT4215 shikimate dehydrogenase (EC 1.1.1.25) (from data) — —
Bacteroides ovatus ATCC 8483 0.62 BACOVA_00211 glycine C-acetyltransferase 0.15 BACOVA_05065 putative shikimate dehydrogenase — —
Pectobacterium carotovorum WPP14 0.62 HER17_RS20765 glycine C-acetyltransferase 0.36 HER17_RS02250 shikimate dehydrogenase low > 75
Rhizobium sp. OAE497 0.61 ABIE40_RS12730 glycine C-acetyltransferase 0.24 ABIE40_RS19250 shikimate dehydrogenase — —
Sinorhizobium meliloti 1021 0.61 SMc01565 2-amino-3-ketobutyrate CoA ligase 0.27 SMc02791 shikimate 5-dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS22685 glycine C-acetyltransferase 0.31 ABZR87_RS01605 shikimate dehydrogenase low > 80
Variovorax sp. OAS795 0.61 ABID97_RS25770 glycine C-acetyltransferase 0.26 ABID97_RS06300 shikimate dehydrogenase — —
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS34655 2-amino-3-ketobutyrate CoA ligase 0.34 BPHYT_RS27375 shikimate 5-dehydrogenase low > 109
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS16535 glycine C-acetyltransferase 0.32 QEN71_RS19460 shikimate dehydrogenase low > 153
Dickeya dadantii 3937 0.59 DDA3937_RS20435 glycine C-acetyltransferase 0.37 DDA3937_RS19100 shikimate dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.59 PGA1_c34330 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.29 PGA1_c35150 shikimate dehydrogenase AroE — —
Castellaniella sp019104865 MT123 0.57 ABCV34_RS14095 glycine C-acetyltransferase 0.32 ABCV34_RS11620 shikimate dehydrogenase low > 48
Sphingomonas koreensis DSMZ 15582 0.55 Ga0059261_2606 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.21 Ga0059261_2194 shikimate dehydrogenase (EC 1.1.1.25) (from data) low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.55 A4249_RS02505 glycine C-acetyltransferase 0.15 A4249_RS13660 shikimate dehydrogenase — —
Paraburkholderia graminis OAS925 0.52 ABIE53_004672 glycine C-acetyltransferase 0.30 ABIE53_003560 shikimate dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.28 TX73_004400 5-aminolevulinate synthase 0.24 TX73_022410 shikimate dehydrogenase — —
Rhodospirillum rubrum S1H 0.28 Rru_A1146 5-aminolevulinic acid synthase (NCBI) 0.24 Rru_A3613 Quinate/Shikimate 5-dehydrogenase (NCBI) — —
Bosea sp. OAE506 0.28 ABIE41_RS04425 5-aminolevulinate synthase 0.21 ABIE41_RS04650 shikimate dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_01220 7-keto-8-aminopelargonate synthetase 0.15 CCNA_00003 shikimate 5-dehydrogenase low > 67
Dinoroseobacter shibae DFL-12 0.28 Dshi_3190 5-aminolevulinic acid synthase (RefSeq) 0.24 Dshi_3450 shikimate 5-dehydrogenase (RefSeq) — —
Caulobacter crescentus NA1000 0.28 CCNA_01220 7-keto-8-aminopelargonate synthetase 0.15 CCNA_00003 shikimate dehydrogenase (EC 1.1.1.25) (from data) low > 66
Methanococcus maripaludis S2 0.27 MMP_RS08100 8-amino-7-oxononanoate synthase 0.21 MMP_RS04855 shikimate dehydrogenase — —
Methanococcus maripaludis JJ 0.26 MMJJ_RS06265 8-amino-7-oxononanoate synthase 0.22 MMJJ_RS00280 shikimate dehydrogenase — —
Magnetospirillum magneticum AMB-1 0.26 AMB_RS08510 5-aminolevulinate synthase 0.18 AMB_RS23010 shikimate dehydrogenase — —
Agrobacterium fabrum C58 0.25 Atu2613 5-aminolevulinate synthase 0.25 Atu0003 shikimate 5-dehydrogenase — —
Azospirillum sp. SherDot2 0.25 MPMX19_02203 5-aminolevulinate synthase 0.21 MPMX19_02560 Shikimate dehydrogenase (NADP(+)) — —
Azospirillum brasilense Sp245 0.25 AZOBR_RS03625 5-aminolevulinate synthase 0.19 AZOBR_RS01765 shikimate 5-dehydrogenase — —
Acinetobacter radioresistens SK82 0.22 MPMX26_02453 8-amino-7-oxononanoate synthase 2 0.32 MPMX26_02748 Shikimate dehydrogenase (NADP(+)) low > 36
Desulfovibrio vulgaris Hildenborough JW710 0.15 DVU2564 bioF 8-amino-7-oxononanoate synthase (Dmitry Rodionov) 0.22 DVU0115 aroE shikimate 5-dehydrogenase (TIGR) — —

Not shown: 8 genomes with orthologs for ABZR86_RS08395 only; 25 genomes with orthologs for ABZR86_RS14985 only