| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Brevundimonas sp. GW460-12-10-14-LB2 | 1.0 | A4249_RS00510 | | DNA repair protein RadC | 1.0 | A4249_RS06705 | | pirin family protein | 0.48 | 9 |
| Azospirillum brasilense Sp245 | 0.46 | AZOBR_RS04400 | | DNA repair protein RadC | 0.41 | AZOBR_RS19815 | | quercetin 2 3-dioxygenase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.44 | MPMX19_00291 | | hypothetical protein | 0.78 | MPMX19_06779 | | Quercetin 2,3-dioxygenase | low | > 112 |
| Rhodopseudomonas palustris CGA009 | 0.43 | TX73_002000 | | DNA repair protein RadC | 0.74 | TX73_004695 | | pirin family protein | 0.33 | 77 |
| Rhodospirillum rubrum S1H | 0.42 | Rru_A0732 | | DNA repair protein RadC (NCBI) | 0.52 | Rru_A0375 | | Pirin-like (NCBI) | low | > 58 |
| Sphingomonas koreensis DSMZ 15582 | 0.41 | Ga0059261_3175 | | DNA repair protein radc | 0.78 | Ga0059261_3905 | | Pirin-related protein | low | > 68 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.29 | GFF1170 | | DNA repair protein RadC | 0.42 | GFF5180 | | Pirin | low | > 90 |
| Pseudomonas fluorescens FW300-N1B4 | 0.27 | Pf1N1B4_2126 | | DNA repair protein RadC | 0.72 | Pf1N1B4_4887 | | Pirin | low | > 87 |
| Klebsiella michiganensis M5al | 0.27 | BWI76_RS27365 | | hypothetical protein | 0.40 | BWI76_RS26250 | | quercetin 2,3-dioxygenase | low | > 92 |
| Ralstonia solanacearum IBSBF1503 | 0.27 | RALBFv3_RS04710 | | JAB domain-containing protein | 0.40 | RALBFv3_RS03635 | | pirin family protein | low | > 76 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.27 | Psyr_0222 | | DNA replication and repair protein RadC | 0.37 | Psyr_3608 | | Pirin, N-terminal | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.27 | AO356_12545 | | hypothetical protein | 0.70 | AO356_27060 | | pirin | low | > 104 |
| Pseudomonas syringae pv. syringae B728a | 0.27 | Psyr_0222 | | DNA replication and repair protein RadC | 0.37 | Psyr_3608 | | Pirin, N-terminal | low | > 86 |
| Ralstonia solanacearum UW163 | 0.27 | UW163_RS08960 | | JAB domain-containing protein | 0.40 | UW163_RS10035 | | pirin family protein | — | — |
| Ralstonia solanacearum GMI1000 | 0.26 | RS_RS12270 | | JAB domain-containing protein | 0.40 | RS_RS11080 | | pirin family protein | low | > 80 |
| Dickeya dianthicola 67-19 | 0.26 | HGI48_RS00700 | | DNA repair protein RadC | 0.40 | HGI48_RS19950 | | pirin family protein | low | > 71 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.26 | H281DRAFT_04066 | | DNA replication and repair protein RadC | 0.41 | H281DRAFT_00225 | | hypothetical protein | low | > 103 |
| Dickeya dianthicola ME23 | 0.26 | DZA65_RS00755 | | JAB domain-containing protein | 0.40 | DZA65_RS20995 | | pirin family protein | low | > 75 |
| Pseudomonas stutzeri RCH2 | 0.26 | Psest_3803 | | DNA repair protein radc | 0.62 | Psest_1579 | | Pirin-related protein | low | > 67 |
| Ralstonia sp. UNC404CL21Col | 0.26 | ABZR87_RS00330 | | DNA repair protein RadC | 0.39 | ABZR87_RS15525 | | pirin family protein | low | > 80 |
| Pseudomonas simiae WCS417 | 0.26 | PS417_27770 | | hypothetical protein | 0.68 | PS417_13400 | | pirin | low | > 88 |
| Paraburkholderia sabiae LMG 24235 | 0.26 | QEN71_RS03085 | | DNA repair protein RadC | 0.44 | QEN71_RS19870 | | pirin family protein | low | > 153 |
| Pseudomonas fluorescens SBW25 | 0.26 | PFLU_RS29445 | | JAB domain-containing protein | 0.69 | PFLU_RS15390 | | pirin family protein | low | > 109 |
| Ralstonia solanacearum PSI07 | 0.26 | RPSI07_RS12675 | | JAB domain-containing protein | 0.40 | RPSI07_RS13595 | | pirin family protein | low | > 81 |
| Pseudomonas fluorescens FW300-N2E2 | 0.26 | Pf6N2E2_4377 | | DNA repair protein RadC | 0.70 | Pf6N2E2_1060 | | Pirin | low | > 103 |
| Pseudomonas fluorescens SBW25-INTG | 0.26 | PFLU_RS29445 | | JAB domain-containing protein | 0.69 | PFLU_RS15390 | | pirin family protein | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.26 | HSERO_RS05945 | | hypothetical protein | 0.40 | HSERO_RS17840 | | quercetin 2,3-dioxygenase | low | > 78 |
| Paraburkholderia graminis OAS925 | 0.26 | ABIE53_003289 | | DNA repair protein RadC | 0.41 | ABIE53_001352 | | redox-sensitive bicupin YhaK (pirin superfamily) | low | > 113 |
| Pseudomonas fluorescens FW300-N2E3 | 0.26 | AO353_09220 | | hypothetical protein | 0.71 | AO353_24670 | | pirin | low | > 101 |
| Pectobacterium carotovorum WPP14 | 0.26 | HER17_RS20830 | | DNA repair protein RadC | 0.39 | HER17_RS01445 | | pirin family protein | low | > 75 |
| Dickeya dadantii 3937 | 0.26 | DDA3937_RS20515 | | DNA repair protein RadC | 0.40 | DDA3937_RS19795 | | pirin family protein | low | > 74 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.25 | OHPLBJKB_00064 | | hypothetical protein | 0.39 | OHPLBJKB_00263 | | Quercetin 2,3-dioxygenase | low | > 73 |
| Serratia liquefaciens MT49 | 0.25 | IAI46_24825 | | DNA repair protein RadC | 0.38 | IAI46_23970 | | pirin family protein | low | > 86 |
| Burkholderia phytofirmans PsJN | 0.25 | BPHYT_RS15625 | | hypothetical protein | 0.41 | BPHYT_RS05510 | | quercetin 2,3-dioxygenase | low | > 109 |
| Escherichia coli BL21 | 0.25 | ECD_03495 | | UPF0758 family protein | 0.39 | ECD_03290 | | quercetinase activity in vitro | low | > 61 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.25 | GFF371 | | DNA repair protein RadC | 0.39 | GFF569 | | Qercetin 2,3-dioxygenase | low | > 78 |
| Escherichia coli ECRC98 | 0.25 | JDDGAC_19245 | radC | DNA repair protein RadC | 0.39 | JDDGAC_20460 | yhhW | quercetin 2,3-dioxygenase | low | > 86 |
| Escherichia coli ECRC101 | 0.25 | MCAODC_06130 | radC | DNA repair protein RadC | 0.39 | MCAODC_07360 | yhhW | quercetin 2,3-dioxygenase | low | > 87 |
| Pseudomonas sp. RS175 | 0.25 | PFR28_04412 | | hypothetical protein | 0.36 | PFR28_02653 | | Quercetin 2,3-dioxygenase | low | > 88 |
| Dechlorosoma suillum PS | 0.25 | Dsui_1537 | | DNA repair protein radc | 0.40 | Dsui_1259 | | Pirin-related protein | — | — |
| Escherichia coli ECRC99 | 0.25 | KEDOAH_12530 | radC | DNA repair protein RadC | 0.39 | KEDOAH_11310 | yhhW | quercetin 2,3-dioxygenase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.25 | RR42_RS16995 | | hypothetical protein | 0.39 | RR42_RS14795 | | quercetin 2,3-dioxygenase | low | > 128 |
| Escherichia coli Nissle 1917 | 0.25 | ECOLIN_RS20730 | | DNA repair protein RadC | 0.39 | ECOLIN_RS19680 | | quercetin 2,3-dioxygenase | low | > 55 |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_07500 | radC | DNA repair protein RadC | 0.39 | NOLOHH_08630 | yhhW | quercetin 2,3-dioxygenase | low | > 75 |
| Escherichia coli ECRC102 | 0.25 | NIAGMN_13380 | radC | DNA repair protein RadC | 0.39 | NIAGMN_14600 | yhhW | quercetin 2,3-dioxygenase | — | — |
| Escherichia coli ECRC62 | 0.25 | BNILDI_04015 | radC | DNA repair protein RadC | 0.39 | BNILDI_02875 | yhhW | quercetin 2,3-dioxygenase | low | > 75 |
| Escherichia coli ECRC100 | 0.25 | OKFHMN_15620 | radC | DNA repair protein RadC | 0.39 | OKFHMN_16830 | yhhW | quercetin 2,3-dioxygenase | low | > 80 |
| Escherichia fergusonii Becca | 0.25 | EFB2_00175 | | hypothetical protein | 0.39 | EFB2_00381 | | Quercetin 2,3-dioxygenase | low | > 86 |
| Escherichia coli BW25113 | 0.25 | b3638 | radC | DNA repair protein (VIMSS) | 0.39 | b3439 | yhhW | hypothetical protein (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.25 | HEPCGN_14445 | radC | DNA repair protein RadC | 0.39 | HEPCGN_15655 | yhhW | quercetin 2,3-dioxygenase | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.25 | PfGW456L13_798 | | DNA repair protein RadC | 0.71 | PfGW456L13_3067 | | Pirin | low | > 87 |
| Rahnella sp. WP5 | 0.24 | EX31_RS14470 | | JAB domain-containing protein | 0.41 | EX31_RS16735 | | pirin family protein | low | > 89 |
| Enterobacter asburiae PDN3 | 0.24 | EX28DRAFT_3888 | | DNA repair protein radc | 0.39 | EX28DRAFT_4275 | | Pirin-related protein | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.24 | MIT1002_00049 | | DNA repair protein RadC | 0.32 | MIT1002_02155 | | Quercetin 2,3-dioxygenase | low | > 70 |
| Enterobacter sp. TBS_079 | 0.24 | MPMX20_00097 | | hypothetical protein | 0.39 | MPMX20_04320 | | Quercetin 2,3-dioxygenase | low | > 85 |
| Pseudomonas putida KT2440 | 0.24 | PP_5284 | | UPF0758 protein PP_5284 | 0.73 | PP_2564 | | putative Quercetin 2,3-dioxygenase | low | > 96 |
| Erwinia tracheiphila SCR3 | 0.24 | LU632_RS21995 | radC | DNA repair protein RadC | 0.36 | LU632_RS19155 | | pirin family protein | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.24 | ABZR86_RS15615 | | DNA repair protein RadC | 0.38 | ABZR86_RS14555 | | pirin family protein | low | > 74 |
| Shewanella amazonensis SB2B | 0.23 | Sama_0327 | radC | DNA repair protein RadC (RefSeq) | 0.37 | Sama_1390 | | hypothetical protein (RefSeq) | low | > 62 |
| Pantoea sp. MT58 | 0.23 | IAI47_00620 | | DNA repair protein RadC | 0.38 | IAI47_20325 | | pirin family protein | low | > 76 |
| Rhodanobacter sp. FW510-T8 | 0.23 | OKGIIK_15660 | radC | DNA repair protein RadC | 0.74 | OKGIIK_07180 | | Putative quercetin 2,3-dioxygenase PA1210 | low | > 52 |
| Pseudomonas sp. S08-1 | 0.23 | OH686_13620 | | UPF0758 family protein | 0.73 | OH686_19590 | | Pirin | low | > 80 |
| Variovorax sp. OAS795 | 0.23 | ABID97_RS07700 | | DNA repair protein RadC | 0.42 | ABID97_RS18010 | | pirin family protein | low | > 91 |
| Kangiella aquimarina DSM 16071 | 0.23 | B158DRAFT_0781 | | DNA repair protein radc | 0.40 | B158DRAFT_1252 | | Pirin-related protein | low | > 40 |
| Variovorax sp. SCN45 | 0.22 | GFF5700 | | UPF0758 family protein | 0.41 | GFF589 | | Pirin | low | > 127 |
| Rhodanobacter denitrificans MT42 | 0.21 | LRK55_RS08695 | | DNA repair protein RadC | 0.73 | LRK55_RS17975 | | pirin family protein | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.21 | LRK54_RS09165 | | DNA repair protein RadC | 0.72 | LRK54_RS18120 | | pirin family protein | low | > 59 |
| Castellaniella sp019104865 MT123 | 0.21 | ABCV34_RS00910 | | DNA repair protein RadC | 0.72 | ABCV34_RS15525 | | pirin family protein | low | > 48 |
| Shewanella sp. ANA-3 | 0.20 | Shewana3_3770 | radC | DNA repair protein RadC (RefSeq) | 0.32 | Shewana3_1221 | | pirin domain-containing protein (RefSeq) | low | > 73 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.19 | Xcc-8004.4897.1 | | DNA repair protein RadC | 0.38 | Xcc-8004.3098.1 | | Pirin | low | > 74 |
| Acidovorax sp. GW101-3H11 | 0.19 | Ac3H11_1774 | | DNA repair protein RadC | 0.40 | Ac3H11_4159 | | Pirin | low | > 79 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.19 | CA264_13835 | | hypothetical protein | 0.36 | CA264_02030 | | hypothetical protein | 0.34 | 48 |
| Acinetobacter radioresistens SK82 | 0.18 | MPMX26_02636 | | hypothetical protein | 0.29 | MPMX26_02373 | | Quercetin 2,3-dioxygenase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.17 | ABZR88_RS01715 | | DNA repair protein RadC | 0.31 | ABZR88_RS20860 | | pirin family protein | low | > 71 |
| Lysobacter sp. OAE881 | 0.17 | ABIE51_RS00095 | | DNA repair protein RadC | 0.78 | ABIE51_RS12775 | | pirin family protein | low | > 62 |
| Bacteroides ovatus ATCC 8483 | 0.15 | BACOVA_03503 | | DNA repair protein RadC | 0.29 | BACOVA_04317 | | pirin family protein | low | > 94 |
| Parabacteroides merdae CL09T00C40 | 0.14 | HMPREF1078_RS04930 | | DNA repair protein RadC | 0.33 | HMPREF1078_RS14290 | | pirin family protein | low | > 61 |
| Phocaeicola dorei CL03T12C01 | 0.14 | ABI39_RS02750 | | DNA repair protein RadC | 0.32 | ABI39_RS13035 | | pirin family protein | low | > 72 |
Not shown: 13 genomes with orthologs for A4249_RS00510 only; 7 genomes with orthologs for A4249_RS06705 only