Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Shewanella sp. ANA-3 | 1.0 | Shewana3_0001 | gidB | 16S rRNA methyltransferase GidB (RefSeq) | 1.0 | Shewana3_1640 | | glutaredoxin-like protein (RefSeq) | 0.68 | 4 |
Shewanella oneidensis MR-1 | 0.96 | SO4757 | gidB | glucose-inhibited division protein B (NCBI ptt file) | 0.97 | SO2880 | | glutaredoxin domain protein (NCBI ptt file) | — | — |
Shewanella loihica PV-4 | 0.80 | Shew_3855 | gidB | glucose-inhibited division protein B (RefSeq) | 0.89 | Shew_1835 | | glutaredoxin-like protein (RefSeq) | — | — |
Shewanella amazonensis SB2B | 0.72 | Sama_3654 | gidB | 16S rRNA methyltransferase GidB (RefSeq) | 0.89 | Sama_1919 | | glutaredoxin-related protein (RefSeq) | — | — |
Klebsiella michiganensis M5al | 0.64 | BWI76_RS00225 | | 16S rRNA methyltransferase G | 0.82 | BWI76_RS16490 | | glutaredoxin | low | > 92 |
Pantoea sp. MT58 | 0.63 | IAI47_00295 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.81 | IAI47_10780 | | Grx4 family monothiol glutaredoxin | — | — |
Serratia liquefaciens MT49 | 0.62 | IAI46_25115 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.80 | IAI46_11260 | | Grx4 family monothiol glutaredoxin | low | > 86 |
Erwinia tracheiphila SCR3 | 0.61 | LU632_RS24810 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.82 | LU632_RS11215 | | Grx4 family monothiol glutaredoxin | — | — |
Rahnella sp. WP5 | 0.61 | EX31_RS06135 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.81 | EX31_RS13820 | | Grx4 family monothiol glutaredoxin | — | — |
Enterobacter sp. TBS_079 | 0.60 | MPMX20_04627 | | Ribosomal RNA small subunit methyltransferase G | 0.82 | MPMX20_01983 | | Glutaredoxin 4 | low | > 85 |
Enterobacter asburiae PDN3 | 0.60 | EX28DRAFT_4016 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.82 | EX28DRAFT_1651 | | monothiol glutaredoxin, Grx4 family | low | > 76 |
Escherichia coli ECRC101 | 0.60 | OKFHMN_14790 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.82 | OKFHMN_27415 | grxD | monothiol glutaredoxin 4 | — | — |
Escherichia coli ECRC102 | 0.60 | NIAGMN_12545 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.82 | NIAGMN_00650 | grxD | monothiol glutaredoxin 4 | — | — |
Escherichia coli ECRC101 | 0.60 | MCAODC_05295 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.82 | MCAODC_17995 | grxD | monothiol glutaredoxin 4 | — | — |
Escherichia fergusonii Becca | 0.60 | EFB2_04893 | | Ribosomal RNA small subunit methyltransferase G | 0.82 | EFB2_02339 | | Glutaredoxin 4 | low | > 86 |
Escherichia coli ECOR27 | 0.60 | NOLOHH_06925 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.82 | NOLOHH_17935 | grxD | monothiol glutaredoxin 4 | low | > 57 |
Escherichia coli ECRC62 | 0.60 | BNILDI_04600 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.82 | BNILDI_16725 | grxD | monothiol glutaredoxin 4 | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.60 | OHPLBJKB_04313 | | Ribosomal RNA small subunit methyltransferase G | 0.82 | OHPLBJKB_02071 | | Glutaredoxin 4 | low | > 73 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.60 | GFF1717 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | 0.82 | GFF3621 | | Glutaredoxin-related protein | low | > 78 |
Escherichia coli ECRC99 | 0.60 | KEDOAH_13360 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.82 | KEDOAH_00695 | grxD | monothiol glutaredoxin 4 | — | — |
Escherichia coli Nissle 1917 | 0.60 | ECOLIN_RS21510 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.82 | ECOLIN_RS09220 | | monothiol glutaredoxin 4 | low | > 52 |
Escherichia coli BL21 | 0.60 | ECD_03624 | | 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein | 0.82 | ECD_01624 | | glutaredoxin-4 | low | > 60 |
Escherichia coli ECRC98 | 0.60 | JDDGAC_18410 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.82 | JDDGAC_02005 | grxD | monothiol glutaredoxin 4 | — | — |
Escherichia coli BW25113 | 0.60 | b3740 | gidB | glucose-inhibited division protein B (NCBI) | 0.82 | b1654 | ydhD | hypothetical protein (NCBI) | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.60 | CSW01_14050 | | ribosomal RNA small subunit methyltransferase G | 0.80 | CSW01_10225 | | monothiol glutaredoxin, Grx4 family | — | — |
Escherichia coli ECOR38 | 0.60 | HEPCGN_13505 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.82 | HEPCGN_05800 | grxD | monothiol glutaredoxin 4 | low | > 85 |
Dickeya dadantii 3937 | 0.59 | DDA3937_RS21600 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.81 | DDA3937_RS12610 | | Grx4 family monothiol glutaredoxin | low | > 74 |
Dickeya dianthicola 67-19 | 0.58 | HGI48_RS21385 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.80 | HGI48_RS12670 | | Grx4 family monothiol glutaredoxin | low | > 71 |
Pectobacterium carotovorum WPP14 | 0.58 | HER17_RS21605 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.83 | HER17_RS09250 | | Grx4 family monothiol glutaredoxin | — | — |
Dickeya dianthicola ME23 | 0.58 | DZA65_RS22365 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.80 | DZA65_RS13125 | | Grx4 family monothiol glutaredoxin | low | > 75 |
Alteromonas macleodii MIT1002 | 0.51 | MIT1002_04123 | | Ribosomal RNA small subunit methyltransferase G | 0.82 | MIT1002_01235 | | Monothiol glutaredoxin | low | > 70 |
Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_5131 | | 16S rRNA m(7)G-527 methyltransferase | 0.64 | Psyr_3898 | | Glutaredoxin-related protein | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_5131 | | 16S rRNA m(7)G-527 methyltransferase | 0.64 | Psyr_3898 | | Glutaredoxin-related protein | — | — |
Marinobacter adhaerens HP15 | 0.45 | HP15_3689 | | glucose-inhibited division protein B | 0.58 | HP15_751 | | monothiol glutaredoxin | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS08680 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.53 | LRK54_RS13825 | | Grx4 family monothiol glutaredoxin | — | — |
Rhodanobacter denitrificans MT42 | 0.44 | LRK55_RS08445 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.53 | LRK55_RS13540 | | Grx4 family monothiol glutaredoxin | — | — |
Pseudomonas putida KT2440 | 0.44 | PP_0003 | | 16S RNA methyltransferase | 0.67 | PP_1081 | | monothiol glutaredoxin 4 | — | — |
Rhodanobacter sp. FW510-T8 | 0.43 | OKGIIK_15445 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.49 | OKGIIK_03060 | grxD | Grx4 family monothiol glutaredoxin | — | — |
Pseudomonas sp. S08-1 | 0.43 | OH686_12665 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.70 | OH686_20435 | | monothiol glutaredoxin, Grx4 family | low | > 80 |
Pseudomonas sp. RS175 | 0.42 | PFR28_04586 | | Ribosomal RNA small subunit methyltransferase G | 0.66 | PFR28_03360 | | Glutaredoxin 4 | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.42 | AO356_11670 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.65 | AO356_18290 | | glutaredoxin | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.42 | ABZR86_RS14875 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.54 | ABZR86_RS09820 | | Grx4 family monothiol glutaredoxin | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.42 | Pf6N2E2_4204 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | 0.64 | Pf6N2E2_5582 | | Glutaredoxin-related protein | — | — |
Paraburkholderia graminis OAS925 | 0.42 | ABIE53_000263 | | 16S rRNA (guanine527-N7)-methyltransferase | 0.46 | ABIE53_003665 | | monothiol glutaredoxin | low | > 113 |
Pseudomonas fluorescens GW456-L13 | 0.42 | PfGW456L13_672 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | 0.64 | PfGW456L13_1742 | | Glutaredoxin-related protein | — | — |
Paraburkholderia sabiae LMG 24235 | 0.42 | QEN71_RS29340 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.49 | QEN71_RS27680 | | Grx4 family monothiol glutaredoxin | low | > 153 |
Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_1935 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | 0.64 | Pf1N1B4_759 | | Glutaredoxin-related protein | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.41 | AO353_10440 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.63 | AO353_04140 | | glutaredoxin | — | — |
Pseudomonas stutzeri RCH2 | 0.41 | Psest_4364 | | 16S rRNA (guanine(527)-N(7))-methyltransferase GidB | 0.68 | Psest_1292 | | monothiol glutaredoxin, Grx4 family | low | > 67 |
Burkholderia phytofirmans PsJN | 0.41 | BPHYT_RS19435 | | 16S rRNA methyltransferase | 0.46 | BPHYT_RS17525 | | glutaredoxin | low | > 109 |
Paraburkholderia bryophila 376MFSha3.1 | 0.40 | H281DRAFT_02386 | | 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) | 0.46 | H281DRAFT_05690 | | monothiol glutaredoxin | — | — |
Pseudomonas fluorescens SBW25 | 0.40 | PFLU_RS30170 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.64 | PFLU_RS05690 | | Grx4 family monothiol glutaredoxin | low | > 109 |
Pseudomonas simiae WCS417 | 0.40 | PS417_28515 | | 16S rRNA methyltransferase | 0.63 | PS417_05605 | | glutaredoxin | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.40 | PFLU_RS30170 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.64 | PFLU_RS05690 | | Grx4 family monothiol glutaredoxin | low | > 109 |
Kangiella aquimarina DSM 16071 | 0.37 | B158DRAFT_0378 | | 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) | 0.71 | B158DRAFT_1228 | | monothiol glutaredoxin, Grx4 family | low | > 40 |
Lysobacter sp. OAE881 | 0.36 | ABIE51_RS01740 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.52 | ABIE51_RS15380 | | Grx4 family monothiol glutaredoxin | low | > 62 |
Acinetobacter radioresistens SK82 | 0.35 | MPMX26_01214 | | Ribosomal RNA small subunit methyltransferase G | 0.56 | MPMX26_01058 | | Glutaredoxin 4 | low | > 36 |
Dechlorosoma suillum PS | 0.35 | Dsui_0847 | | 16S rRNA (guanine(527)-N(7))-methyltransferase GidB | 0.53 | Dsui_0118 | | monothiol glutaredoxin, Grx4 family | 0.59 | 43 |
Ralstonia solanacearum PSI07 | 0.33 | RPSI07_RS08415 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.48 | RPSI07_RS10625 | | monothiol glutaredoxin, Grx4 family | — | — |
Variovorax sp. OAS795 | 0.33 | ABID97_RS02910 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.40 | ABID97_RS07180 | | Grx4 family monothiol glutaredoxin | low | > 91 |
Acidovorax sp. GW101-3H11 | 0.33 | Ac3H11_4955 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | 0.41 | Ac3H11_4778 | | Glutaredoxin-related protein | low | > 79 |
Xanthomonas campestris pv. campestris strain 8004 | 0.33 | Xcc-8004.5135.1 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | 0.53 | Xcc-8004.2014.1 | | Glutaredoxin-related protein | — | — |
Ralstonia solanacearum GMI1000 | 0.33 | RS_RS16670 | | ribosomal RNA small subunit methyltransferase G | 0.48 | RS_RS14550 | | monothiol glutaredoxin, Grx4 family | — | — |
Ralstonia solanacearum IBSBF1503 | 0.32 | RALBFv3_RS08860 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.48 | RALBFv3_RS06600 | | monothiol glutaredoxin, Grx4 family | — | — |
Ralstonia solanacearum UW163 | 0.32 | UW163_RS04750 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.48 | UW163_RS07025 | | monothiol glutaredoxin, Grx4 family | — | — |
Ralstonia sp. UNC404CL21Col | 0.32 | ABZR87_RS04120 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.47 | ABZR87_RS02265 | | Grx4 family monothiol glutaredoxin | low | > 80 |
Castellaniella sp019104865 MT123 | 0.32 | ABCV34_RS11720 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.42 | ABCV34_RS14065 | | Grx4 family monothiol glutaredoxin | — | — |
Variovorax sp. SCN45 | 0.31 | GFF3337 | | 16S rRNA (guanine(527)-N(7))-methyltransferase (EC 2.1.1.170) | 0.41 | GFF2522 | | Glutaredoxin-related protein | low | > 127 |
Cupriavidus basilensis FW507-4G11 | 0.30 | RR42_RS20210 | | 16S rRNA methyltransferase | 0.44 | RR42_RS18485 | | glutaredoxin | low | > 128 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.28 | GFF2017 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | 0.44 | GFF1268 | | Glutaredoxin-related protein | low | > 90 |
Magnetospirillum magneticum AMB-1 | 0.16 | AMB_RS00015 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.50 | AMB_RS10680 | | monothiol glutaredoxin, Grx4 family | — | — |
Azospirillum brasilense Sp245 | 0.15 | AZOBR_RS01815 | | 16S rRNA methyltransferase | 0.52 | AZOBR_RS04325 | | glutaredoxin | — | — |
Rhodospirillum rubrum S1H | 0.13 | Rru_A3626 | | Glucose inhibited division protein (NCBI) | 0.45 | Rru_A0705 | | Glutaredoxin-related protein (NCBI) | — | — |