Conservation of cofitness between Shewana3_0001 and Shewana3_1640 in Shewanella sp. ANA-3

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_0001 gidB 16S rRNA methyltransferase GidB (RefSeq) 1.0 Shewana3_1640 glutaredoxin-like protein (RefSeq) 0.68 4
Shewanella oneidensis MR-1 0.96 SO4757 gidB glucose-inhibited division protein B (NCBI ptt file) 0.97 SO2880 glutaredoxin domain protein (NCBI ptt file)
Shewanella loihica PV-4 0.80 Shew_3855 gidB glucose-inhibited division protein B (RefSeq) 0.89 Shew_1835 glutaredoxin-like protein (RefSeq)
Shewanella amazonensis SB2B 0.72 Sama_3654 gidB 16S rRNA methyltransferase GidB (RefSeq) 0.89 Sama_1919 glutaredoxin-related protein (RefSeq)
Klebsiella michiganensis M5al 0.64 BWI76_RS00225 16S rRNA methyltransferase G 0.82 BWI76_RS16490 glutaredoxin low > 92
Pantoea sp. MT58 0.63 IAI47_00295 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.81 IAI47_10780 Grx4 family monothiol glutaredoxin
Serratia liquefaciens MT49 0.62 IAI46_25115 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.80 IAI46_11260 Grx4 family monothiol glutaredoxin low > 86
Erwinia tracheiphila SCR3 0.61 LU632_RS24810 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.82 LU632_RS11215 Grx4 family monothiol glutaredoxin
Rahnella sp. WP5 0.61 EX31_RS06135 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.81 EX31_RS13820 Grx4 family monothiol glutaredoxin
Enterobacter sp. TBS_079 0.60 MPMX20_04627 Ribosomal RNA small subunit methyltransferase G 0.82 MPMX20_01983 Glutaredoxin 4 low > 85
Enterobacter asburiae PDN3 0.60 EX28DRAFT_4016 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.82 EX28DRAFT_1651 monothiol glutaredoxin, Grx4 family low > 76
Escherichia coli ECRC101 0.60 OKFHMN_14790 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.82 OKFHMN_27415 grxD monothiol glutaredoxin 4
Escherichia coli ECRC102 0.60 NIAGMN_12545 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.82 NIAGMN_00650 grxD monothiol glutaredoxin 4
Escherichia coli ECRC101 0.60 MCAODC_05295 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.82 MCAODC_17995 grxD monothiol glutaredoxin 4
Escherichia fergusonii Becca 0.60 EFB2_04893 Ribosomal RNA small subunit methyltransferase G 0.82 EFB2_02339 Glutaredoxin 4 low > 86
Escherichia coli ECOR27 0.60 NOLOHH_06925 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.82 NOLOHH_17935 grxD monothiol glutaredoxin 4 low > 57
Escherichia coli ECRC62 0.60 BNILDI_04600 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.82 BNILDI_16725 grxD monothiol glutaredoxin 4
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_04313 Ribosomal RNA small subunit methyltransferase G 0.82 OHPLBJKB_02071 Glutaredoxin 4 low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF1717 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.82 GFF3621 Glutaredoxin-related protein low > 78
Escherichia coli ECRC99 0.60 KEDOAH_13360 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.82 KEDOAH_00695 grxD monothiol glutaredoxin 4
Escherichia coli Nissle 1917 0.60 ECOLIN_RS21510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.82 ECOLIN_RS09220 monothiol glutaredoxin 4 low > 52
Escherichia coli BL21 0.60 ECD_03624 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein 0.82 ECD_01624 glutaredoxin-4 low > 60
Escherichia coli ECRC98 0.60 JDDGAC_18410 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.82 JDDGAC_02005 grxD monothiol glutaredoxin 4
Escherichia coli BW25113 0.60 b3740 gidB glucose-inhibited division protein B (NCBI) 0.82 b1654 ydhD hypothetical protein (NCBI)
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_14050 ribosomal RNA small subunit methyltransferase G 0.80 CSW01_10225 monothiol glutaredoxin, Grx4 family
Escherichia coli ECOR38 0.60 HEPCGN_13505 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.82 HEPCGN_05800 grxD monothiol glutaredoxin 4 low > 85
Dickeya dadantii 3937 0.59 DDA3937_RS21600 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.81 DDA3937_RS12610 Grx4 family monothiol glutaredoxin low > 74
Dickeya dianthicola 67-19 0.58 HGI48_RS21385 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.80 HGI48_RS12670 Grx4 family monothiol glutaredoxin low > 71
Pectobacterium carotovorum WPP14 0.58 HER17_RS21605 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.83 HER17_RS09250 Grx4 family monothiol glutaredoxin
Dickeya dianthicola ME23 0.58 DZA65_RS22365 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.80 DZA65_RS13125 Grx4 family monothiol glutaredoxin low > 75
Alteromonas macleodii MIT1002 0.51 MIT1002_04123 Ribosomal RNA small subunit methyltransferase G 0.82 MIT1002_01235 Monothiol glutaredoxin low > 70
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_5131 16S rRNA m(7)G-527 methyltransferase 0.64 Psyr_3898 Glutaredoxin-related protein
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_5131 16S rRNA m(7)G-527 methyltransferase 0.64 Psyr_3898 Glutaredoxin-related protein
Marinobacter adhaerens HP15 0.45 HP15_3689 glucose-inhibited division protein B 0.58 HP15_751 monothiol glutaredoxin
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS08680 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.53 LRK54_RS13825 Grx4 family monothiol glutaredoxin
Rhodanobacter denitrificans MT42 0.44 LRK55_RS08445 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.53 LRK55_RS13540 Grx4 family monothiol glutaredoxin
Pseudomonas putida KT2440 0.44 PP_0003 16S RNA methyltransferase 0.67 PP_1081 monothiol glutaredoxin 4
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_15445 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.49 OKGIIK_03060 grxD Grx4 family monothiol glutaredoxin
Pseudomonas sp. S08-1 0.43 OH686_12665 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.70 OH686_20435 monothiol glutaredoxin, Grx4 family low > 80
Pseudomonas sp. RS175 0.42 PFR28_04586 Ribosomal RNA small subunit methyltransferase G 0.66 PFR28_03360 Glutaredoxin 4
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_11670 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.65 AO356_18290 glutaredoxin
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS14875 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.54 ABZR86_RS09820 Grx4 family monothiol glutaredoxin
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_4204 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.64 Pf6N2E2_5582 Glutaredoxin-related protein
Paraburkholderia graminis OAS925 0.42 ABIE53_000263 16S rRNA (guanine527-N7)-methyltransferase 0.46 ABIE53_003665 monothiol glutaredoxin low > 113
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.64 PfGW456L13_1742 Glutaredoxin-related protein
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS29340 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.49 QEN71_RS27680 Grx4 family monothiol glutaredoxin low > 153
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_1935 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.64 Pf1N1B4_759 Glutaredoxin-related protein
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_10440 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.63 AO353_04140 glutaredoxin
Pseudomonas stutzeri RCH2 0.41 Psest_4364 16S rRNA (guanine(527)-N(7))-methyltransferase GidB 0.68 Psest_1292 monothiol glutaredoxin, Grx4 family low > 67
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS19435 16S rRNA methyltransferase 0.46 BPHYT_RS17525 glutaredoxin low > 109
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_02386 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) 0.46 H281DRAFT_05690 monothiol glutaredoxin
Pseudomonas fluorescens SBW25 0.40 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.64 PFLU_RS05690 Grx4 family monothiol glutaredoxin low > 109
Pseudomonas simiae WCS417 0.40 PS417_28515 16S rRNA methyltransferase 0.63 PS417_05605 glutaredoxin
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.64 PFLU_RS05690 Grx4 family monothiol glutaredoxin low > 109
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_0378 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) 0.71 B158DRAFT_1228 monothiol glutaredoxin, Grx4 family low > 40
Lysobacter sp. OAE881 0.36 ABIE51_RS01740 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.52 ABIE51_RS15380 Grx4 family monothiol glutaredoxin low > 62
Acinetobacter radioresistens SK82 0.35 MPMX26_01214 Ribosomal RNA small subunit methyltransferase G 0.56 MPMX26_01058 Glutaredoxin 4 low > 36
Dechlorosoma suillum PS 0.35 Dsui_0847 16S rRNA (guanine(527)-N(7))-methyltransferase GidB 0.53 Dsui_0118 monothiol glutaredoxin, Grx4 family 0.59 43
Ralstonia solanacearum PSI07 0.33 RPSI07_RS08415 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.48 RPSI07_RS10625 monothiol glutaredoxin, Grx4 family
Variovorax sp. OAS795 0.33 ABID97_RS02910 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.40 ABID97_RS07180 Grx4 family monothiol glutaredoxin low > 91
Acidovorax sp. GW101-3H11 0.33 Ac3H11_4955 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.41 Ac3H11_4778 Glutaredoxin-related protein low > 79
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.5135.1 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.53 Xcc-8004.2014.1 Glutaredoxin-related protein
Ralstonia solanacearum GMI1000 0.33 RS_RS16670 ribosomal RNA small subunit methyltransferase G 0.48 RS_RS14550 monothiol glutaredoxin, Grx4 family
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS08860 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.48 RALBFv3_RS06600 monothiol glutaredoxin, Grx4 family
Ralstonia solanacearum UW163 0.32 UW163_RS04750 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.48 UW163_RS07025 monothiol glutaredoxin, Grx4 family
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS04120 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.47 ABZR87_RS02265 Grx4 family monothiol glutaredoxin low > 80
Castellaniella sp019104865 MT123 0.32 ABCV34_RS11720 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.42 ABCV34_RS14065 Grx4 family monothiol glutaredoxin
Variovorax sp. SCN45 0.31 GFF3337 16S rRNA (guanine(527)-N(7))-methyltransferase (EC 2.1.1.170) 0.41 GFF2522 Glutaredoxin-related protein low > 127
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS20210 16S rRNA methyltransferase 0.44 RR42_RS18485 glutaredoxin low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF2017 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.44 GFF1268 Glutaredoxin-related protein low > 90
Magnetospirillum magneticum AMB-1 0.16 AMB_RS00015 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.50 AMB_RS10680 monothiol glutaredoxin, Grx4 family
Azospirillum brasilense Sp245 0.15 AZOBR_RS01815 16S rRNA methyltransferase 0.52 AZOBR_RS04325 glutaredoxin
Rhodospirillum rubrum S1H 0.13 Rru_A3626 Glucose inhibited division protein (NCBI) 0.45 Rru_A0705 Glutaredoxin-related protein (NCBI)

Not shown: 5 genomes with orthologs for Shewana3_0001 only; 13 genomes with orthologs for Shewana3_1640 only