| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Bacteroides thetaiotaomicron VPI-5482 | 1.0 | BT3253 | | phosphoribosylamine--glycine ligase (NCBI ptt file) | 1.0 | BT3935 | | aminotransferase (NCBI ptt file) | 0.72 | 14 |
| Bacteroides ovatus ATCC 8483 | 0.97 | BACOVA_01348 | | phosphoribosylamine--glycine ligase | 0.94 | BACOVA_01161 | | aminotransferase, class I/II | 0.84 | 42 |
| Bacteroides stercoris CC31F | 0.84 | HMPREF1181_RS01580 | | phosphoribosylamine--glycine ligase | 0.87 | HMPREF1181_RS06565 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.85 | 23 |
| Phocaeicola vulgatus CL09T03C04 | 0.80 | HMPREF1058_RS10995 | | phosphoribosylamine--glycine ligase | 0.79 | HMPREF1058_RS14790 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.45 | 67 |
| Phocaeicola dorei CL03T12C01 | 0.79 | ABI39_RS06055 | | phosphoribosylamine--glycine ligase | 0.78 | ABI39_RS10505 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.64 | 50 |
| Parabacteroides merdae CL09T00C40 | 0.76 | HMPREF1078_RS06805 | | phosphoribosylamine--glycine ligase | 0.73 | HMPREF1078_RS01130 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.96 | 13 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.55 | CA264_20115 | | phosphoribosylamine--glycine ligase | 0.45 | CA264_01550 | | aminotransferase | low | > 74 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.55 | Echvi_0167 | | phosphoribosylamine--glycine ligase | 0.52 | Echvi_0124 | | Aspartate/tyrosine/aromatic aminotransferase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.47 | Pf6N2E2_3520 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | 0.28 | Pf6N2E2_2862 | | Uncharacterized PLP-dependent aminotransferase YfdZ | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_58 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | 0.27 | PfGW456L13_1928 | | Uncharacterized PLP-dependent aminotransferase YfdZ | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_1316 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | 0.28 | Pf1N1B4_555 | | Uncharacterized PLP-dependent aminotransferase YfdZ | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.47 | AO356_08230 | | phosphoribosylamine--glycine ligase | 0.28 | AO356_05050 | | glutamate-pyruvate aminotransferase | — | — |
| Pseudomonas sp. RS175 | 0.47 | PFR28_05213 | | Phosphoribosylamine--glycine ligase | 0.27 | PFR28_00596 | | Glutamate-pyruvate aminotransferase AlaC | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_13645 | | phosphoribosylamine--glycine ligase | 0.28 | AO353_03235 | | glutamate-pyruvate aminotransferase | — | — |
| Pseudomonas fluorescens SBW25 | 0.46 | PFLU_RS03010 | | phosphoribosylamine--glycine ligase | 0.27 | PFLU_RS23580 | | alanine transaminase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.46 | PFLU_RS03010 | | phosphoribosylamine--glycine ligase | 0.27 | PFLU_RS23580 | | alanine transaminase | — | — |
| Pseudomonas putida KT2440 | 0.46 | PP_4823 | | Phosphoribosylamine--glycine ligase | 0.28 | PP_0817 | | aminotransferase | — | — |
| Marinobacter adhaerens HP15 | 0.46 | HP15_3228 | | phosphoribosylamine-glycine ligase | 0.14 | HP15_1162 | | aminotransferase, class I and II | — | — |
| Pantoea sp. MT58 | 0.45 | IAI47_18045 | | phosphoribosylamine--glycine ligase | 0.28 | IAI47_05575 | | alanine transaminase | low | > 76 |
| Pseudomonas simiae WCS417 | 0.45 | PS417_02935 | | phosphoribosylamine--glycine ligase | 0.28 | PS417_21975 | | glutamate-pyruvate aminotransferase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_4407 | | phosphoribosylamine--glycine ligase | 0.28 | Psyr_0468 | | Aminotransferase, class I and II | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_4407 | | phosphoribosylamine--glycine ligase | 0.28 | Psyr_0468 | | Aminotransferase, class I and II | low | > 86 |
| Serratia liquefaciens MT49 | 0.45 | IAI46_01360 | | phosphoribosylamine--glycine ligase | 0.28 | IAI46_18180 | | alanine transaminase | low | > 86 |
| Dickeya dadantii 3937 | 0.45 | DDA3937_RS01215 | | phosphoribosylamine--glycine ligase | 0.29 | DDA3937_RS14825 | | alanine transaminase | low | > 74 |
| Pseudomonas sp. S08-1 | 0.45 | OH686_07625 | | Phosphoribosylamine--glycine ligase | 0.27 | OH686_04000 | | Glutamate-pyruvate aminotransferase AlaC | — | — |
| Rahnella sp. WP5 | 0.45 | EX31_RS16855 | | phosphoribosylamine--glycine ligase | 0.28 | EX31_RS20015 | | alanine transaminase | low | > 89 |
| Dickeya dianthicola ME23 | 0.45 | DZA65_RS01255 | | phosphoribosylamine--glycine ligase | 0.29 | DZA65_RS15705 | | alanine transaminase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.45 | HGI48_RS01210 | | phosphoribosylamine--glycine ligase | 0.29 | HGI48_RS14755 | | alanine transaminase | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.45 | HER17_RS20340 | | phosphoribosylamine--glycine ligase | 0.29 | HER17_RS06655 | | alanine transaminase | low | > 75 |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_1013 | | phosphoribosylamine--glycine ligase | 0.15 | Psest_1470 | | succinyldiaminopimelate transaminase | low | > 67 |
| Escherichia coli ECOR27 | 0.44 | NOLOHH_05460 | purD | Phosphoribosylamine--glycine ligase | 0.28 | NOLOHH_14055 | alaC | alanine transaminase | low | > 57 |
| Escherichia coli BL21 | 0.44 | ECD_03882 | | phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase | 0.28 | ECD_02289 | | glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase | low | > 60 |
| Escherichia coli ECRC62 | 0.44 | BNILDI_06060 | purD | Phosphoribosylamine--glycine ligase | 0.28 | BNILDI_12910 | alaC | alanine transaminase | — | — |
| Escherichia coli ECOR38 | 0.44 | HEPCGN_11955 | purD | Phosphoribosylamine--glycine ligase | 0.28 | HEPCGN_21580 | alaC | alanine transaminase | low | > 85 |
| Escherichia fergusonii Becca | 0.44 | EFB2_04605 | | Phosphoribosylamine--glycine ligase | 0.28 | EFB2_01495 | | Glutamate-pyruvate aminotransferase AlaC | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.44 | OHPLBJKB_04044 | | Phosphoribosylamine--glycine ligase | 0.28 | OHPLBJKB_01342 | | Glutamate-pyruvate aminotransferase AlaC | 0.38 | 72 |
| Escherichia coli Nissle 1917 | 0.44 | ECOLIN_RS23095 | | phosphoribosylamine--glycine ligase | 0.28 | ECOLIN_RS13690 | | alanine transaminase | low | > 52 |
| Escherichia coli ECRC101 | 0.44 | OKFHMN_13315 | purD | Phosphoribosylamine--glycine ligase | 0.28 | OKFHMN_22370 | alaC | alanine transaminase | — | — |
| Escherichia coli ECRC101 | 0.44 | MCAODC_03815 | purD | Phosphoribosylamine--glycine ligase | 0.28 | MCAODC_12900 | alaC | alanine transaminase | — | — |
| Escherichia coli ECRC98 | 0.44 | JDDGAC_16940 | purD | Phosphoribosylamine--glycine ligase | 0.28 | JDDGAC_26335 | alaC | alanine transaminase | — | — |
| Escherichia coli ECRC102 | 0.44 | NIAGMN_11065 | purD | Phosphoribosylamine--glycine ligase | 0.28 | NIAGMN_20145 | alaC | alanine transaminase | — | — |
| Escherichia coli ECRC99 | 0.44 | KEDOAH_14845 | purD | Phosphoribosylamine--glycine ligase | 0.28 | KEDOAH_05850 | alaC | alanine transaminase | — | — |
| Escherichia coli BW25113 | 0.44 | b4005 | purD | phosphoribosylamine--glycine ligase (NCBI) | 0.28 | b2379 | yfdZ | hypothetical protein (NCBI) | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.44 | GFF4187 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | 0.28 | GFF1970 | | Uncharacterized PLP-dependent aminotransferase YfdZ | low | > 78 |
| Enterobacter sp. TBS_079 | 0.44 | MPMX20_00225 | | Phosphoribosylamine--glycine ligase | 0.28 | MPMX20_03277 | | Glutamate-pyruvate aminotransferase AlaC | low | > 85 |
| Enterobacter asburiae PDN3 | 0.43 | EX28DRAFT_4544 | | phosphoribosylamine--glycine ligase (EC 6.3.4.13) | 0.28 | EX28DRAFT_0240 | | Aspartate/tyrosine/aromatic aminotransferase | low | > 76 |
| Klebsiella michiganensis M5al | 0.43 | BWI76_RS01610 | | phosphoribosylamine--glycine ligase | 0.28 | BWI76_RS20495 | | alanine transaminase | low | > 92 |
| Castellaniella sp019104865 MT123 | 0.43 | ABCV34_RS02550 | | phosphoribosylamine--glycine ligase | 0.29 | ABCV34_RS02290 | | alanine transaminase | — | — |
| Agrobacterium fabrum C58 | 0.42 | Atu0647 | | phosphoribosylamine--glycine ligase | 0.28 | Atu1589 | | aminotransferase, class I | 0.85 | 36 |
| Rhizobium sp. OAE497 | 0.41 | ABIE40_RS05430 | | phosphoribosylamine--glycine ligase | 0.29 | ABIE40_RS08645 | | LL-diaminopimelate aminotransferase | 0.81 | 72 |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_2421 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | 0.27 | Ac3H11_3720 | | Uncharacterized PLP-dependent aminotransferase YfdZ | — | — |
| Dechlorosoma suillum PS | 0.41 | Dsui_1596 | | phosphoribosylamine--glycine ligase | 0.27 | Dsui_2909 | | aspartate/tyrosine/aromatic aminotransferase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.40 | HSERO_RS17755 | | phosphoribosylamine--glycine ligase | 0.28 | HSERO_RS12800 | | aspartate aminotransferase | — | — |
| Variovorax sp. SCN45 | 0.39 | GFF302 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | 0.13 | GFF254 | | N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17), type 2 | 0.82 | 39 |
| Magnetospirillum magneticum AMB-1 | 0.39 | AMB_RS01075 | | phosphoribosylamine--glycine ligase | 0.27 | AMB_RS18860 | | pyridoxal phosphate-dependent aminotransferase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.39 | TX73_005965 | | phosphoribosylamine--glycine ligase | 0.25 | TX73_012935 | | LL-diaminopimelate aminotransferase | — | — |
| Sinorhizobium meliloti 1021 | 0.39 | SMc00993 | | phosphoribosylamine--glycine ligase | 0.29 | SMc00294 | | aminotransferase | 0.92 | 32 |
| Cupriavidus basilensis FW507-4G11 | 0.39 | RR42_RS04730 | | phosphoribosylamine--glycine ligase | 0.27 | RR42_RS28540 | | glutamate--pyruvate aminotransferase | — | — |
| Synechococcus elongatus PCC 7942 | 0.39 | Synpcc7942_0925 | purD | phosphoribosylamine--glycine ligase | 0.26 | Synpcc7942_1794 | | succinyldiaminopimelate transaminase | — | — |
| Variovorax sp. OAS795 | 0.38 | ABID97_RS16735 | | phosphoribosylamine--glycine ligase | 0.13 | ABID97_RS16630 | | succinyldiaminopimelate transaminase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.38 | A4249_RS09255 | | phosphoribosylamine--glycine ligase | 0.30 | A4249_RS02425 | | LL-diaminopimelate aminotransferase | 0.88 | 6 |
| Bosea sp. OAE506 | 0.38 | ABIE41_RS23160 | | phosphoribosylamine--glycine ligase | 0.26 | ABIE41_RS19175 | | LL-diaminopimelate aminotransferase | low | > 77 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.38 | GFF4524 | | Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | 0.15 | GFF4553 | | N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.38 | CCNA_00299 | | phosphoribosylamine--glycine ligase | 0.27 | CCNA_01446 | | LL-diaminopimelate aminotransferase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.38 | CCNA_00299 | | phosphoribosylamine--glycine ligase | 0.27 | CCNA_01446 | | LL-diaminopimelate aminotransferase | low | > 66 |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_01630 | | Phosphoribosylamine--glycine ligase | 0.27 | MPMX19_00804 | | Glutamate-pyruvate aminotransferase AlaC | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.37 | DvMF_1722 | | phosphoribosylamine--glycine ligase (RefSeq) | 0.37 | DvMF_0361 | | LL-diaminopimelate aminotransferase (RefSeq) | — | — |
| Azospirillum brasilense Sp245 | 0.37 | AZOBR_RS04470 | | phosphoribosylamine--glycine ligase | 0.27 | AZOBR_RS07830 | | aminotransferase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.36 | DVU0488 | purD | phosphoribosylamine--glycine ligase (TIGR) | 0.36 | DVU1655 | aspC4 | aminotransferase, classes I and II (TIGR) | — | — |
| Rhodospirillum rubrum S1H | 0.35 | Rru_A0646 | | Phosphoribosylamine--glycine ligase (NCBI) | 0.29 | Rru_A2411 | | Aminotransferase, class I and II (NCBI) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.35 | Ga0059261_1441 | | phosphoribosylamine--glycine ligase (EC 6.3.4.13) | 0.29 | Ga0059261_1288 | | Aspartate/tyrosine/aromatic aminotransferase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.34 | Dshi_2728 | | phosphoribosylamine--glycine ligase (RefSeq) | 0.16 | Dshi_0060 | | aminotransferase class I and II (RefSeq) | — | — |
| Bifidobacterium breve UCC2003 | 0.31 | BBR_RS13370 | | phosphoribosylamine--glycine ligase | 0.24 | BBR_RS13460 | | aminotransferase | low | > 34 |
| Mycobacterium tuberculosis H37Rv | 0.28 | Rv0772 | | Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase) | 0.15 | Rv1178 | | Probable aminotransferase | — | — |
| Methanococcus maripaludis S2 | 0.21 | MMP_RS02095 | | phosphoribosylamine--glycine ligase | 0.23 | MMP_RS07845 | | LL-diaminopimelate aminotransferase | — | — |
| Methanococcus maripaludis JJ | 0.21 | MMJJ_RS03210 | | phosphoribosylamine--glycine ligase | 0.23 | MMJJ_RS06510 | | LL-diaminopimelate aminotransferase | — | — |
Not shown: 28 genomes with orthologs for BT3253 only; 0 genomes with orthologs for BT3935 only