Conservation of cofitness between SO0873 and SO3641 in Shewanella oneidensis MR-1

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO0873 glutamyl-tRNA synthetase domain protein (NCBI ptt file) 1.0 SO3641 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) (NCBI ptt file) 0.35 4
Shewanella sp. ANA-3 0.90 Shewana3_3405 glutamyl-tRNA synthetase, class Ic (RefSeq) 0.94 Shewana3_3211 apaH diadenosine tetraphosphatase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.68 Sama_0779 glutamyl-tRNA synthetase domain-containing protein (RefSeq) 0.65 Sama_2821 apaH diadenosine tetraphosphatase (RefSeq) low > 62
Shewanella loihica PV-4 0.65 Shew_3130 glutamate--tRNA ligase (RefSeq) 0.63 Shew_0877 apaH diadenosine tetraphosphatase (RefSeq) low > 60
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3733 glutamyl-queuosine tRNA(Asp) synthetase 0.46 EX28DRAFT_3643 Bis(5'nucleosyl)-tetraphosphatase, ApaH low > 76
Escherichia coli BL21 0.50 ECD_00143 glutamyl-Q tRNA(Asp) synthetase 0.46 ECD_00053 diadenosine tetraphosphatase low > 61
Enterobacter sp. TBS_079 0.50 MPMX20_00830 Glutamyl-Q tRNA(Asp) synthetase 0.46 MPMX20_00745 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03518 Glutamyl-Q tRNA(Asp) synthetase 0.46 OHPLBJKB_03607 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11 low > 74
Escherichia coli ECOR27 0.50 NOLOHH_02695 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.46 NOLOHH_03190 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 76
Escherichia coli BW25113 0.50 b0144 yadB glutamyl-Q tRNA(Asp) synthetase (RefSeq) 0.46 b0049 apaH diadenosinetetraphosphatase (NCBI) low > 76
Escherichia coli ECRC102 0.50 NIAGMN_08200 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.46 NIAGMN_08695 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 80
Escherichia coli ECRC99 0.50 KEDOAH_17805 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.46 KEDOAH_17310 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH
Escherichia coli ECRC100 0.50 OKFHMN_10350 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.46 OKFHMN_10845 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 79
Escherichia coli ECRC98 0.50 JDDGAC_13945 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.46 JDDGAC_14440 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 87
Escherichia coli ECRC101 0.50 MCAODC_00865 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.46 MCAODC_01360 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 87
Escherichia coli ECRC62 0.50 BNILDI_08975 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.46 BNILDI_08415 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 75
Escherichia coli ECOR38 0.50 HEPCGN_08300 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.46 HEPCGN_08835 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH 0.55 6
Escherichia fergusonii Becca 0.50 EFB2_03900 Glutamyl-Q tRNA(Asp) synthetase 0.46 EFB2_03994 Bis(5'-nucleosyl)-tetraphosphatase [symmetrical] low > 86
Escherichia coli Nissle 1917 0.50 ECOLIN_RS00795 tRNA glutamyl-Q(34) synthetase GluQRS 0.46 ECOLIN_RS00275 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 55
Klebsiella michiganensis M5al 0.49 BWI76_RS05010 tRNA glutamyl-Q synthetase 0.46 BWI76_RS04510 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) low > 92
Serratia liquefaciens MT49 0.49 IAI46_21215 tRNA glutamyl-Q(34) synthetase GluQRS 0.46 IAI46_03235 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF88 glutamyl-Q-tRNA synthetase 0.46 GFF192 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41)' transl_table=11 low > 78
Klebsiella pneumoniae MKP103 0.48 KDGMDA_13265 tRNA glutamyl-Q(34) synthetase GluQRS 0.47 KDGMDA_12735 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 95
Dickeya dianthicola 67-19 0.48 HGI48_RS16055 tRNA glutamyl-Q(34) synthetase GluQRS 0.47 HGI48_RS18210 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 71
Dickeya dianthicola ME23 0.47 DZA65_RS17140 tRNA glutamyl-Q(34) synthetase GluQRS 0.47 DZA65_RS19350 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) low > 75
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_03150 tRNA glutamyl-Q(34) synthetase GluQRS 0.45 CSW01_02315 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) low > 62
Pectobacterium carotovorum WPP14 0.47 HER17_RS05575 tRNA glutamyl-Q(34) synthetase GluQRS 0.47 HER17_RS02950 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 75
Rahnella sp. WP5 0.47 EX31_RS03255 tRNA glutamyl-Q(34) synthetase GluQRS 0.45 EX31_RS03790 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) low > 89
Pantoea agglomerans CFBP13505 P0401 0.47 PagCFBP13505_RS13360 tRNA glutamyl-Q(34) synthetase GluQRS 0.48 PagCFBP13505_RS12900 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) low > 74
Dickeya dadantii 3937 0.47 DDA3937_RS15940 tRNA glutamyl-Q(34) synthetase GluQRS 0.47 DDA3937_RS18275 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 74
Pantoea sp. MT58 0.47 IAI47_15640 tRNA glutamyl-Q(34) synthetase GluQRS 0.48 IAI47_16095 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 76
Erwinia tracheiphila HP pepo 2.2 0.46 IJEDHG_15055 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.47 IJEDHG_06155 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH
Erwinia tracheiphila SCR3 0.46 LU632_RS20085 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.47 LU632_RS02740 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH
Erwinia amylovora T8 0.46 OLJFJH_00770 tRNA glutamyl-Q(34) synthetase GluQRS 0.45 OLJFJH_01380 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH low > 58
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0057 glutamyl-queuosine tRNA(Asp) synthetase 0.39 B158DRAFT_0583 Bis(5'nucleosyl)-tetraphosphatase, ApaH low > 40
Alteromonas macleodii MIT1002 0.44 MIT1002_03691 Glutamyl-Q tRNA(Asp) synthetase 0.43 MIT1002_00779 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical low > 70
Pseudomonas aeruginosa PA14 0.42 IKLFDK_29995 tRNA glutamyl-Q(34) synthetase GluQRS 0.43 IKLFDK_22460 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 98
Pseudomonas aeruginosa PUPa3 0.42 DQ20_RS52675 gluQRS;go_function=aminoacyl-tRNA tRNA glutamyl-Q(34) synthetase GluQRS 0.43 DQ20_RS36370 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 101
Pseudomonas aeruginosa MRSN321 0.42 DY961_RS09355 gluQRS;go_function=aminoacyl-tRNA tRNA glutamyl-Q(34) synthetase GluQRS 0.43 DY961_RS22980 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 100
Pseudomonas sp. S08-1 0.42 OH686_17275 glutamyl-queuosine tRNA(Asp) synthetase 0.40 OH686_15030 bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
Pseudomonas segetis P6 0.41 MPMX49_01256 Glutamyl-Q tRNA(Asp) synthetase 0.40 MPMX49_00877 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical
Pseudomonas putida KT2440 0.40 PP_4694 Glutamyl-Q tRNA(Asp) synthetase 0.38 PP_0399 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical
Pseudomonas sp. SVBP6 0.40 COO64_RS15075 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.40 COO64_RS22520 symmetrical bis(5'-nucleosyl)-tetraphosphatase
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_1527 glutamyl-Q-tRNA synthetase 0.41 PfGW456L13_1198 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 87
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_5159 glutamyl-Q-tRNA synthetase 0.39 Pf6N2E2_4803 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 103
Pseudomonas sp. BP01 0.39 JOY50_RS27690 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.38 JOY50_RS18130 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 84
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS00575 tRNA glutamyl-Q(34) synthetase GluQRS 0.31 ABZR86_RS11280 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 74
Pseudomonas sp. DMC3 0.39 GFF4033 Glutamyl-Q tRNA(Asp) synthetase 0.40 GFF39 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical low > 89
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2861 glutamyl-Q-tRNA synthetase 0.40 Pf1N1B4_2526 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 87
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_16090 glutamyl-Q tRNA(Asp) ligase 0.39 AO356_14325 diadenosine tetraphosphatase
Pseudomonas stutzeri RCH2 0.39 Psest_1002 glutamyl-queuosine tRNA(Asp) synthetase 0.42 Psest_3670 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) low > 67
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_14415 glutamyl-Q tRNA(Asp) ligase 0.39 AO353_07325 diadenosine tetraphosphatase low > 101
Dechlorosoma suillum PS 0.39 Dsui_1040 glutamyl-queuosine tRNA(Asp) synthetase 0.35 Dsui_0399 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 51
Pseudomonas lactucae CFBP13502 0.39 GEMAOFIL_04927 Glutamyl-Q tRNA(Asp) synthetase 0.40 GEMAOFIL_05284 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_03640 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.32 OKGIIK_11635 apaH symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 53
Pseudomonas sp. RS175 0.39 PFR28_03715 Glutamyl-Q tRNA(Asp) synthetase 0.39 PFR28_04066 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11
Pseudomonas orientalis W4I3 0.39 QF045_RS26140 tRNA glutamyl-Q(34) synthetase GluQRS 0.40 QF045_RS00220 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 93
Pseudomonas simiae WCS417 0.38 PS417_23880 glutamyl-Q tRNA(Asp) ligase 0.39 PS417_25820 diadenosine tetraphosphatase
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.2261.1 glutamyl-Q-tRNA synthetase 0.29 Xcc-8004.4275.1 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 74
Pseudomonas fluorescens SBW25 0.38 PFLU_RS25720 tRNA glutamyl-Q(34) synthetase GluQRS 0.40 PFLU_RS27475 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS25720 tRNA glutamyl-Q(34) synthetase GluQRS 0.40 PFLU_RS27475 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_0834 Glutamyl-tRNA synthetase, class Ic 0.38 Psyr_4629 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
Acinetobacter radioresistens SK82 0.38 MPMX26_00176 Glutamyl-Q tRNA(Asp) synthetase 0.37 MPMX26_00597 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical low > 36
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_0834 Glutamyl-tRNA synthetase, class Ic 0.38 Psyr_4629 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
Rhodanobacter sp000427505 FW510-R12 0.38 LRK53_RS13775 tRNA glutamyl-Q(34) synthetase GluQRS 0.31 LRK53_RS16200 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 59
Methylophilus sp. DMC18 0.37 GFF102 Glutamyl-Q tRNA(Asp) synthetase 0.33 GFF2691 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical low > 43
Rhodanobacter denitrificans MT42 0.37 LRK55_RS14535 tRNA glutamyl-Q(34) synthetase GluQRS 0.32 LRK55_RS12030 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 63
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS14820 tRNA glutamyl-Q(34) synthetase GluQRS 0.32 LRK54_RS12295 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 59
Acinetobacter baumannii LAC-4 0.36 RR41_RS17735 tRNA glutamyl-Q(34) synthetase GluQRS 0.35 RR41_RS02590 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 55
Marinobacter adhaerens HP15 0.35 HP15_331 glutamyl-Q tRNA(Asp) synthetase 0.40 HP15_3277 diadenosine tetraphosphatase low > 73
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS06160 glutamyl-Q tRNA(Asp) ligase 0.32 BPHYT_RS04255 diadenosine tetraphosphatase low > 109
Ralstonia solanacearum UW163 0.34 UW163_RS10025 tRNA glutamyl-Q(34) synthetase GluQRS 0.29 UW163_RS00925 symmetrical bis(5'-nucleosyl)-tetraphosphatase
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS03645 tRNA glutamyl-Q(34) synthetase GluQRS 0.29 RALBFv3_RS12640 symmetrical bis(5'-nucleosyl)-tetraphosphatase
Ralstonia solanacearum GMI1000 0.34 RS_RS11090 tRNA glutamyl-Q(34) synthetase GluQRS 0.29 RS_RS03425 bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
Ralstonia solanacearum PSI07 0.34 RPSI07_RS13585 tRNA glutamyl-Q(34) synthetase GluQRS 0.28 RPSI07_RS20620 symmetrical bis(5'-nucleosyl)-tetraphosphatase
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS17850 glutamyl-Q tRNA(Asp) ligase 0.32 HSERO_RS02350 diadenosine tetraphosphatase low > 78
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_00309 glutamyl-Q tRNA(Asp) synthetase 0.32 H281DRAFT_04820 Bis(5'nucleosyl)-tetraphosphatase, ApaH low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF5183 glutamyl-Q-tRNA synthetase 0.32 GFF223 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 90
Castellaniella sp019104865 MT123 0.33 ABCV34_RS12295 glutamyl-Q tRNA(Asp) synthetase 0.35 ABCV34_RS10715 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 48
Acidovorax sp. GW101-3H11 0.33 Ac3H11_4162 glutamyl-Q-tRNA synthetase 0.33 Ac3H11_1136 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 79
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS15535 tRNA glutamyl-Q(34) synthetase GluQRS 0.30 ABZR87_RS08640 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 80
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS14805 glutamyl-Q tRNA(Asp) ligase 0.33 RR42_RS15845 biotin transporter BioY low > 128
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS24480 tRNA glutamyl-Q(34) synthetase GluQRS 0.32 QEN71_RS25765 symmetrical bis(5'-nucleosyl)-tetraphosphatase 0.37 105
Variovorax sp. SCN45 0.28 GFF592 Glutamyl-Q tRNA(Asp) synthetase 0.33 GFF1936 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) low > 127
Variovorax sp. OAS795 0.27 ABID97_RS18025 tRNA glutamyl-Q(34) synthetase GluQRS 0.33 ABID97_RS21950 symmetrical bis(5'-nucleosyl)-tetraphosphatase low > 91

Not shown: 3 genomes with orthologs for SO0873 only; 0 genomes with orthologs for SO3641 only