Conservation of cofitness between b3617 and b3871 in Escherichia coli BW25113

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3617 kbl 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) 1.0 b3871 bipA GTP-binding protein (NCBI) 0.34 17
Escherichia coli ECRC99 1.00 KEDOAH_12440 kbl glycine C-acetyltransferase 1.00 KEDOAH_14060 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC62 1.00 BNILDI_03925 kbl glycine C-acetyltransferase 1.00 BNILDI_05310 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC102 1.00 NIAGMN_13470 kbl glycine C-acetyltransferase 1.00 NIAGMN_11845 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC101 1.00 MCAODC_06220 kbl glycine C-acetyltransferase 1.00 MCAODC_04590 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC98 1.00 JDDGAC_19335 kbl glycine C-acetyltransferase 1.00 JDDGAC_17715 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC101 1.00 OKFHMN_15710 kbl glycine C-acetyltransferase 1.00 OKFHMN_14090 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECOR27 1.00 NOLOHH_07590 kbl glycine C-acetyltransferase 1.00 NOLOHH_06220 typA ribosome-dependent GTPase TypA low > 57
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20640 glycine C-acetyltransferase 1.00 ECOLIN_RS22315 ribosome-dependent GTPase TypA low > 52
Escherichia coli BL21 1.00 ECD_03475 glycine C-acetyltransferase 1.00 ECD_03756 GTP-binding protein low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00082 2-amino-3-ketobutyrate coenzyme A ligase 1.00 OHPLBJKB_04181 GTP-binding protein TypA/BipA low > 73
Escherichia coli ECOR38 1.00 HEPCGN_14550 kbl glycine C-acetyltransferase 1.00 HEPCGN_12720 typA ribosome-dependent GTPase TypA low > 85
Escherichia fergusonii Becca 0.99 EFB2_00193 2-amino-3-ketobutyrate coenzyme A ligase 1.00 EFB2_04745 GTP-binding protein TypA/BipA low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.98 GFF393 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.97 GFF2223 GTP-binding protein TypA/BipA low > 78
Enterobacter asburiae PDN3 0.96 EX28DRAFT_3870 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.95 EX28DRAFT_4353 GTP-binding protein TypA/BipA — —
Enterobacter sp. TBS_079 0.95 MPMX20_00115 2-amino-3-ketobutyrate coenzyme A ligase 0.96 MPMX20_04594 GTP-binding protein TypA/BipA — —
Klebsiella michiganensis M5al 0.94 BWI76_RS27255 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.95 BWI76_RS00410 translational GTPase TypA — —
Serratia liquefaciens MT49 0.88 IAI46_24730 glycine C-acetyltransferase 0.93 IAI46_24945 ribosome-dependent GTPase TypA low > 86
Rahnella sp. WP5 0.85 EX31_RS14390 glycine C-acetyltransferase 0.90 EX31_RS15865 ribosome-dependent GTPase TypA low > 89
Pantoea sp. MT58 0.83 IAI47_00695 glycine C-acetyltransferase 0.93 IAI47_00465 ribosome-dependent GTPase TypA low > 76
Pectobacterium carotovorum WPP14 0.81 HER17_RS20765 glycine C-acetyltransferase 0.91 HER17_RS21425 ribosome-dependent GTPase TypA low > 75
Shewanella amazonensis SB2B 0.78 Sama_0098 2-amino-3-ketobutyrate coenzyme A ligase (RefSeq) 0.79 Sama_3415 virulence regulator BipA (RefSeq) low > 62
Dickeya dadantii 3937 0.77 DDA3937_RS20435 glycine C-acetyltransferase 0.91 DDA3937_RS00140 ribosome-dependent GTPase TypA low > 74
Shewanella loihica PV-4 0.77 Shew_3709 2-amino-3-ketobutyrate coenzyme A ligase (RefSeq) 0.80 Shew_3553 GTP-binding protein TypA (RefSeq) low > 60
Shewanella oneidensis MR-1 0.76 SO4674 kbl 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) 0.78 SO4408 bipA virulence regulator BipA (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.76 Shewana3_4104 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.78 Shewana3_0301 GTP-binding protein TypA (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.74 MIT1002_00063 2-amino-3-ketobutyrate coenzyme A ligase 0.77 MIT1002_03181 hypothetical protein low > 70
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_18570 glycine C-acetyltransferase 0.78 CSW01_13840 translational GTPase TypA low > 62
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_0286 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.77 B158DRAFT_0725 GTP-binding protein TypA/BipA low > 40
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS34655 2-amino-3-ketobutyrate CoA ligase 0.64 BPHYT_RS08105 GTP-binding protein — —
Sinorhizobium meliloti 1021 0.69 SMc01565 2-amino-3-ketobutyrate CoA ligase 0.53 SMc03242 GTP-binding protein low > 103
Rhizobium sp. OAE497 0.69 ABIE40_RS12730 glycine C-acetyltransferase 0.54 ABIE40_RS18125 translational GTPase TypA low > 107
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_03587 2-amino-3-ketobutyrate coenzyme A ligase 0.65 H281DRAFT_05111 GTP-binding protein — —
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS16535 glycine C-acetyltransferase 0.65 QEN71_RS23065 translational GTPase TypA — —
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS22865 2-amino-3-ketobutyrate CoA ligase 0.63 RR42_RS12810 GTP-binding protein — —
Castellaniella sp019104865 MT123 0.66 ABCV34_RS14095 glycine C-acetyltransferase 0.61 ABCV34_RS02140 translational GTPase TypA — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.65 CA264_15955 glycine C-acetyltransferase 0.49 CA264_00540 translational GTPase TypA low > 74
Lysobacter sp. OAE881 0.65 ABIE51_RS06135 glycine C-acetyltransferase 0.68 ABIE51_RS05990 translational GTPase TypA low > 62
Xanthomonas campestris pv. campestris strain 8004 0.64 Xcc-8004.4088.1 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.70 Xcc-8004.4106.1 GTP-binding protein TypA/BipA — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.64 Echvi_0145 2-amino-3-ketobutyrate coenzyme A ligase 0.49 Echvi_4063 GTP-binding protein TypA/BipA — —
Pedobacter sp. GW460-11-11-14-LB5 0.64 CA265_RS15280 glycine C-acetyltransferase 0.50 CA265_RS23750 translational GTPase TypA low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.63 ABZR88_RS00030 glycine C-acetyltransferase 0.51 ABZR88_RS00415 translational GTPase TypA — —
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_06595 kbl glycine C-acetyltransferase 0.68 OKGIIK_06470 typA translational GTPase TypA — —
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS00660 glycine C-acetyltransferase 0.69 LRK54_RS00775 translational GTPase TypA low > 59
Rhodanobacter denitrificans MT42 0.62 LRK55_RS00430 glycine C-acetyltransferase 0.69 LRK55_RS00550 translational GTPase TypA low > 63
Variovorax sp. OAS795 0.62 ABID97_RS25770 glycine C-acetyltransferase 0.58 ABID97_RS16470 translational GTPase TypA low > 91
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS19395 glycine C-acetyltransferase 0.63 RALBFv3_RS15715 translational GTPase TypA — —
Parabacteroides merdae CL09T00C40 0.61 HMPREF1078_RS09505 glycine C-acetyltransferase 0.49 HMPREF1078_RS17580 translational GTPase TypA low > 61
Ralstonia solanacearum GMI1000 0.61 RS_RS21750 glycine C-acetyltransferase 0.63 RS_RS06495 translational GTPase TypA — —
Dyella japonica UNC79MFTsu3.2 0.61 ABZR86_RS08395 glycine C-acetyltransferase 0.69 ABZR86_RS20640 translational GTPase TypA low > 74
Phaeobacter inhibens DSM 17395 0.60 PGA1_c34330 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.51 PGA1_c15300 GTP-binding protein TypA low > 62
Phocaeicola vulgatus CL09T03C04 0.60 HMPREF1058_RS10455 glycine C-acetyltransferase 0.50 HMPREF1058_RS10055 translational GTPase TypA low > 67
Phocaeicola dorei CL03T12C01 0.60 ABI39_RS06660 glycine C-acetyltransferase 0.50 ABI39_RS06695 translational GTPase TypA low > 72
Bacteroides stercoris CC31F 0.60 HMPREF1181_RS10950 glycine C-acetyltransferase 0.51 HMPREF1181_RS01180 translational GTPase TypA low > 56
Paraburkholderia graminis OAS925 0.60 ABIE53_004672 glycine C-acetyltransferase 0.65 ABIE53_002454 GTP-binding protein — —
Bacteroides thetaiotaomicron VPI-5482 0.59 BT1371 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) 0.51 BT2787 GTP-binding elongation factor family protein TypA/BipA (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.59 BACOVA_00211 glycine C-acetyltransferase 0.51 BACOVA_01078 GTP-binding protein TypA low > 94
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS02505 glycine C-acetyltransferase 0.49 A4249_RS13585 translational GTPase TypA — —
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS22685 glycine C-acetyltransferase 0.64 ABZR87_RS11245 translational GTPase TypA low > 80
Sphingomonas koreensis DSMZ 15582 0.53 Ga0059261_2606 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.55 Ga0059261_0817 GTP-binding protein TypA/BipA low > 68
Dinoroseobacter shibae DFL-12 0.27 Dshi_3190 5-aminolevulinic acid synthase (RefSeq) 0.51 Dshi_0019 GTP-binding protein TypA (RefSeq) low > 64
Caulobacter crescentus NA1000 0.26 CCNA_01220 7-keto-8-aminopelargonate synthetase 0.49 CCNA_00778 GTP-binding protein TypA/BipA low > 66
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_01220 7-keto-8-aminopelargonate synthetase 0.49 CCNA_00778 GTP-binding protein TypA/BipA low > 67
Rhodopseudomonas palustris CGA009 0.26 TX73_007985 5-aminolevulinate synthase 0.53 TX73_002120 translational GTPase TypA low > 86
Bosea sp. OAE506 0.26 ABIE41_RS04425 5-aminolevulinate synthase 0.52 ABIE41_RS04255 translational GTPase TypA low > 77
Rhodospirillum rubrum S1H 0.26 Rru_A1146 5-aminolevulinic acid synthase (NCBI) 0.50 Rru_A0148 GTP-binding protein TypA (NCBI) low > 58
Agrobacterium fabrum C58 0.25 Atu2613 5-aminolevulinate synthase 0.53 Atu2663 GTP-binding tyrosin phosphorylated protein — —
Azospirillum brasilense Sp245 0.24 AZOBR_RS03625 5-aminolevulinate synthase 0.53 AZOBR_RS09920 GTP-binding protein TypA — —
Azospirillum sp. SherDot2 0.24 MPMX19_02203 5-aminolevulinate synthase 0.53 MPMX19_01378 GTP-binding protein TypA/BipA — —
Acinetobacter radioresistens SK82 0.23 MPMX26_02453 8-amino-7-oxononanoate synthase 2 0.72 MPMX26_02489 GTP-binding protein TypA/BipA low > 36

Not shown: 3 genomes with orthologs for b3617 only; 31 genomes with orthologs for b3871 only