Conservation of cofitness between b3617 and b2948 in Escherichia coli BW25113

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3617 kbl 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) 1.0 b2948 yqgE orf, hypothetical protein (VIMSS) 0.38 8
Escherichia coli ECRC99 1.00 KEDOAH_12440 kbl glycine C-acetyltransferase 1.00 KEDOAH_08870 algH YqgE/AlgH family protein — —
Escherichia coli ECOR27 1.00 NOLOHH_07590 kbl glycine C-acetyltransferase 1.00 NOLOHH_11140 yqgE YqgE/AlgH family protein low > 57
Escherichia coli ECRC102 1.00 NIAGMN_13470 kbl glycine C-acetyltransferase 1.00 NIAGMN_17035 yqgE YqgE/AlgH family protein — —
Escherichia coli ECRC101 1.00 MCAODC_06220 kbl glycine C-acetyltransferase 1.00 MCAODC_09790 yqgE YqgE/AlgH family protein — —
Escherichia coli ECRC62 1.00 BNILDI_03925 kbl glycine C-acetyltransferase 1.00 BNILDI_09720 yqgE YqgE/AlgH family protein — —
Escherichia coli ECRC98 1.00 JDDGAC_19335 kbl glycine C-acetyltransferase 1.00 JDDGAC_22900 yqgE YqgE/AlgH family protein — —
Escherichia coli ECRC101 1.00 OKFHMN_15710 kbl glycine C-acetyltransferase 1.00 OKFHMN_19270 yqgE YqgE/AlgH family protein — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20640 glycine C-acetyltransferase 1.00 ECOLIN_RS16400 YqgE/AlgH family protein low > 52
Escherichia coli BL21 1.00 ECD_03475 glycine C-acetyltransferase 1.00 ECD_02778 uncharacterized protein low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00082 2-amino-3-ketobutyrate coenzyme A ligase 1.00 OHPLBJKB_00770 hypothetical protein low > 73
Escherichia coli ECOR38 1.00 HEPCGN_14550 kbl glycine C-acetyltransferase 1.00 HEPCGN_18575 yqgE YqgE/AlgH family protein low > 85
Escherichia fergusonii Becca 0.99 EFB2_00193 2-amino-3-ketobutyrate coenzyme A ligase 1.00 EFB2_00954 hypothetical protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.98 GFF393 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.94 GFF3050 UPF0301 protein YqgE low > 78
Enterobacter asburiae PDN3 0.96 EX28DRAFT_3870 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.87 EX28DRAFT_2986 Putative transcriptional regulator low > 76
Enterobacter sp. TBS_079 0.95 MPMX20_00115 2-amino-3-ketobutyrate coenzyme A ligase 0.88 MPMX20_03806 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.94 BWI76_RS27255 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.90 BWI76_RS24080 DUF179 domain-containing protein low > 92
Serratia liquefaciens MT49 0.88 IAI46_24730 glycine C-acetyltransferase 0.72 IAI46_21395 YqgE/AlgH family protein low > 86
Rahnella sp. WP5 0.85 EX31_RS14390 glycine C-acetyltransferase 0.73 EX31_RS02670 YqgE/AlgH family protein low > 89
Pantoea sp. MT58 0.83 IAI47_00695 glycine C-acetyltransferase 0.76 IAI47_03610 YqgE/AlgH family protein low > 76
Pectobacterium carotovorum WPP14 0.81 HER17_RS20765 glycine C-acetyltransferase 0.72 HER17_RS02630 YqgE/AlgH family protein low > 75
Shewanella amazonensis SB2B 0.78 Sama_0098 2-amino-3-ketobutyrate coenzyme A ligase (RefSeq) 0.49 Sama_2472 putative transcriptional regulator (RefSeq) low > 62
Dickeya dadantii 3937 0.77 DDA3937_RS20435 glycine C-acetyltransferase 0.74 DDA3937_RS18565 YqgE/AlgH family protein low > 74
Shewanella loihica PV-4 0.77 Shew_3709 2-amino-3-ketobutyrate coenzyme A ligase (RefSeq) 0.48 Shew_1144 hypothetical protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.76 SO4674 kbl 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) 0.50 SO3346 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.76 Shewana3_4104 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.51 Shewana3_1200 hypothetical protein (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.74 MIT1002_00063 2-amino-3-ketobutyrate coenzyme A ligase 0.48 MIT1002_03056 hypothetical protein low > 70
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_18570 glycine C-acetyltransferase 0.52 CSW01_02485 YqgE/AlgH family protein low > 62
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_0286 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.47 B158DRAFT_0191 Putative transcriptional regulator low > 40
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS34655 2-amino-3-ketobutyrate CoA ligase 0.40 BPHYT_RS04220 hypothetical protein low > 109
Sinorhizobium meliloti 1021 0.69 SMc01565 2-amino-3-ketobutyrate CoA ligase 0.33 SMc00019 hypothetical protein low > 103
Rhizobium sp. OAE497 0.69 ABIE40_RS12730 glycine C-acetyltransferase 0.34 ABIE40_RS04185 YqgE/AlgH family protein low > 107
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_03587 2-amino-3-ketobutyrate coenzyme A ligase 0.40 H281DRAFT_04814 putative transcriptional regulator low > 103
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS16535 glycine C-acetyltransferase 0.40 QEN71_RS25795 YqgE/AlgH family protein low > 153
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS22865 2-amino-3-ketobutyrate CoA ligase 0.43 RR42_RS15875 hypothetical protein low > 128
Castellaniella sp019104865 MT123 0.66 ABCV34_RS14095 glycine C-acetyltransferase 0.38 ABCV34_RS10730 YqgE/AlgH family protein low > 48
Pontibacter actiniarum KMM 6156, DSM 19842 0.65 CA264_15955 glycine C-acetyltransferase 0.17 CA264_05580 hypothetical protein low > 74
Lysobacter sp. OAE881 0.65 ABIE51_RS06135 glycine C-acetyltransferase 0.42 ABIE51_RS16025 YqgE/AlgH family protein low > 62
Xanthomonas campestris pv. campestris strain 8004 0.64 Xcc-8004.4088.1 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.45 Xcc-8004.1720.1 UPF0301 protein YqgE low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.64 Echvi_0145 2-amino-3-ketobutyrate coenzyme A ligase 0.20 Echvi_3442 Putative transcriptional regulator low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.64 CA265_RS15280 glycine C-acetyltransferase 0.18 CA265_RS07725 hypothetical protein low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.63 ABZR88_RS00030 glycine C-acetyltransferase 0.20 ABZR88_RS10130 YqgE/AlgH family protein low > 71
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_06595 kbl glycine C-acetyltransferase 0.45 OKGIIK_11085 algH YqgE/AlgH family protein low > 52
Rhodanobacter denitrificans MT42 0.62 LRK55_RS00430 glycine C-acetyltransferase 0.45 LRK55_RS03980 YqgE/AlgH family protein — —
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS00660 glycine C-acetyltransferase 0.45 LRK54_RS04210 YqgE/AlgH family protein low > 59
Variovorax sp. OAS795 0.62 ABID97_RS25770 glycine C-acetyltransferase 0.44 ABID97_RS24675 YqgE/AlgH family protein low > 91
Parabacteroides merdae CL09T00C40 0.61 HMPREF1078_RS09505 glycine C-acetyltransferase 0.22 HMPREF1078_RS07600 YqgE/AlgH family protein low > 61
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS19395 glycine C-acetyltransferase 0.42 RALBFv3_RS12610 DUF179 domain-containing protein low > 76
Ralstonia solanacearum GMI1000 0.61 RS_RS21750 glycine C-acetyltransferase 0.42 RS_RS03395 YqgE/AlgH family protein — —
Dyella japonica UNC79MFTsu3.2 0.61 ABZR86_RS08395 glycine C-acetyltransferase 0.46 ABZR86_RS10380 YqgE/AlgH family protein — —
Phaeobacter inhibens DSM 17395 0.60 PGA1_c34330 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.42 PGA1_c03130 Putative transcriptional regulator low > 62
Bacteroides stercoris CC31F 0.60 HMPREF1181_RS10950 glycine C-acetyltransferase 0.22 HMPREF1181_RS16440 YqgE/AlgH family protein low > 56
Phocaeicola dorei CL03T12C01 0.60 ABI39_RS06660 glycine C-acetyltransferase 0.20 ABI39_RS14885 YqgE/AlgH family protein low > 72
Phocaeicola vulgatus CL09T03C04 0.60 HMPREF1058_RS10455 glycine C-acetyltransferase 0.20 HMPREF1058_RS18575 YqgE/AlgH family protein low > 67
Paraburkholderia graminis OAS925 0.60 ABIE53_004672 glycine C-acetyltransferase 0.40 ABIE53_001128 putative transcriptional regulator low > 113
Bacteroides thetaiotaomicron VPI-5482 0.59 BT1371 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) 0.21 BT1078 putative transcriptional regulator (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.59 BACOVA_00211 glycine C-acetyltransferase 0.23 BACOVA_04061 putative ACR, COG1678 low > 94
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS02505 glycine C-acetyltransferase 0.32 A4249_RS00260 YqgE/AlgH family protein low > 48
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS22685 glycine C-acetyltransferase 0.39 ABZR87_RS08610 YqgE/AlgH family protein low > 80
Sphingomonas koreensis DSMZ 15582 0.53 Ga0059261_2606 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.32 Ga0059261_4015 Putative transcriptional regulator low > 68
Dinoroseobacter shibae DFL-12 0.27 Dshi_3190 5-aminolevulinic acid synthase (RefSeq) 0.38 Dshi_3083 protein of unknown function DUF179 (RefSeq) low > 64
Rhodopseudomonas palustris CGA009 0.26 TX73_007985 5-aminolevulinate synthase 0.35 TX73_004710 YqgE/AlgH family protein low > 86
Caulobacter crescentus NA1000 0.26 CCNA_01220 7-keto-8-aminopelargonate synthetase 0.36 CCNA_03506 putative transcriptional regulator low > 66
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_01220 7-keto-8-aminopelargonate synthetase 0.36 CCNA_03506 putative transcriptional regulator low > 67
Bosea sp. OAE506 0.26 ABIE41_RS04425 5-aminolevulinate synthase 0.35 ABIE41_RS23005 YqgE/AlgH family protein low > 77
Rhodospirillum rubrum S1H 0.26 Rru_A1146 5-aminolevulinic acid synthase (NCBI) 0.39 Rru_A3059 Protein of unknown function DUF179 (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.25 AMB_RS08510 5-aminolevulinate synthase 0.39 AMB_RS04505 YqgE/AlgH family protein — —
Agrobacterium fabrum C58 0.25 Atu2613 5-aminolevulinate synthase 0.36 Atu0781 hypothetical protein — —
Azospirillum brasilense Sp245 0.24 AZOBR_RS03625 5-aminolevulinate synthase 0.36 AZOBR_RS10525 hypothetical protein — —
Azospirillum sp. SherDot2 0.24 MPMX19_02203 5-aminolevulinate synthase 0.38 MPMX19_01077 hypothetical protein — —
Acinetobacter radioresistens SK82 0.23 MPMX26_02453 8-amino-7-oxononanoate synthase 2 0.35 MPMX26_00238 hypothetical protein low > 36

Not shown: 2 genomes with orthologs for b3617 only; 25 genomes with orthologs for b2948 only