Conservation of cofitness between b1232 and b2290 in Escherichia coli BW25113

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1232 purU formyltetrahydrofolate deformylase (NCBI) 1.0 b2290 yfbQ aspartate aminotransferase (NCBI) 0.74 11
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02453 Formyltetrahydrofolate deformylase 1.00 OHPLBJKB_01415 Glutamate-pyruvate aminotransferase AlaA low > 73
Escherichia fergusonii Becca 1.00 EFB2_02694 Formyltetrahydrofolate deformylase 1.00 EFB2_01568 Glutamate-pyruvate aminotransferase AlaA low > 86
Escherichia coli BL21 1.00 ECD_01208 formyltetrahydrofolate hydrolase 1.00 ECD_02215 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase low > 60
Escherichia coli ECOR38 1.00 HEPCGN_25030 purU formyltetrahydrofolate deformylase 1.00 HEPCGN_22030 alaA alanine transaminase AlaA low > 85
Escherichia coli Nissle 1917 1.00 ECOLIN_RS07460 formyltetrahydrofolate deformylase 1.00 ECOLIN_RS13295 alanine transaminase AlaA low > 52
Escherichia coli ECOR27 1.00 NOLOHH_20480 purU formyltetrahydrofolate deformylase 1.00 NOLOHH_14445 alaA alanine transaminase AlaA low > 57
Escherichia coli ECRC101 1.00 MCAODC_21690 purU formyltetrahydrofolate deformylase 1.00 MCAODC_13865 alaA alanine transaminase AlaA — —
Escherichia coli ECRC99 1.00 KEDOAH_25565 purU formyltetrahydrofolate deformylase 1.00 KEDOAH_05370 alaA alanine transaminase AlaA — —
Escherichia coli ECRC102 1.00 NIAGMN_27665 purU formyltetrahydrofolate deformylase 1.00 NIAGMN_20595 alaA alanine transaminase AlaA — —
Escherichia coli ECRC98 1.00 JDDGAC_06005 purU formyltetrahydrofolate deformylase 1.00 JDDGAC_26790 alaA alanine transaminase AlaA — —
Escherichia coli ECRC101 1.00 OKFHMN_28570 purU formyltetrahydrofolate deformylase 1.00 OKFHMN_22825 alaA alanine transaminase AlaA — —
Escherichia coli ECRC62 0.99 BNILDI_18635 purU formyltetrahydrofolate deformylase 1.00 BNILDI_13365 alaA alanine transaminase AlaA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2756 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.97 GFF1894 Aspartate aminotransferase (EC 2.6.1.1) low > 78
Klebsiella michiganensis M5al 0.96 BWI76_RS17290 formyltetrahydrofolate deformylase 0.97 BWI76_RS20205 aminotransferase AlaT low > 92
Enterobacter sp. TBS_079 0.95 MPMX20_02596 Formyltetrahydrofolate deformylase 0.96 MPMX20_03220 Glutamate-pyruvate aminotransferase AlaA low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0858 formyltetrahydrofolate deformylase 0.97 EX28DRAFT_0319 Aspartate/tyrosine/aromatic aminotransferase low > 76
Serratia liquefaciens MT49 0.90 IAI46_14265 formyltetrahydrofolate deformylase 0.91 IAI46_17720 pyridoxal phosphate-dependent aminotransferase low > 86
Pectobacterium carotovorum WPP14 0.90 HER17_RS11065 formyltetrahydrofolate deformylase 0.91 HER17_RS07115 pyridoxal phosphate-dependent aminotransferase low > 75
Pantoea sp. MT58 0.90 IAI47_09010 formyltetrahydrofolate deformylase 0.93 IAI47_06350 pyridoxal phosphate-dependent aminotransferase low > 76
Dickeya dadantii 3937 0.90 DDA3937_RS10325 formyltetrahydrofolate deformylase 0.93 DDA3937_RS14345 pyridoxal phosphate-dependent aminotransferase low > 74
Erwinia tracheiphila SCR3 0.89 LU632_RS12940 purU formyltetrahydrofolate deformylase 0.91 LU632_RS07955 pyridoxal phosphate-dependent aminotransferase low > 74
Dickeya dianthicola ME23 0.89 DZA65_RS10810 formyltetrahydrofolate deformylase 0.93 DZA65_RS14995 pyridoxal phosphate-dependent aminotransferase low > 75
Dickeya dianthicola 67-19 0.89 HGI48_RS10335 formyltetrahydrofolate deformylase 0.92 HGI48_RS14320 pyridoxal phosphate-dependent aminotransferase low > 71
Rahnella sp. WP5 0.89 EX31_RS10115 formyltetrahydrofolate deformylase 0.88 EX31_RS19445 pyridoxal phosphate-dependent aminotransferase low > 89
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_09940 formyltetrahydrofolate deformylase 0.81 CSW01_09870 pyridoxal phosphate-dependent aminotransferase low > 62
Shewanella sp. ANA-3 0.70 Shewana3_2821 purU formyltetrahydrofolate deformylase (RefSeq) 0.72 Shewana3_2145 aminotransferase AlaT (RefSeq) 0.51 67
Shewanella amazonensis SB2B 0.69 Sama_1134 purU formyltetrahydrofolate deformylase (RefSeq) 0.73 Sama_1697 aminotransferase AlaT (RefSeq) low > 62
Shewanella oneidensis MR-1 0.68 SO1624 purU formyltetrahydrofolate deformylase (NCBI ptt file) 0.73 SO2483 aspartate aminotransferase, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.65 Shew_2640 purU formyltetrahydrofolate deformylase (RefSeq) 0.73 Shew_1914 aminotransferase AlaT (RefSeq) low > 60
Dechlorosoma suillum PS 0.41 Dsui_0762 formyltetrahydrofolate deformylase 0.68 Dsui_2908 aspartate/tyrosine/aromatic aminotransferase — —
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_03710 formyltetrahydrofolate deformylase 0.75 AO353_19150 aminotransferase low > 101
Pseudomonas simiae WCS417 0.40 PS417_22565 formyltetrahydrofolate deformylase 0.74 PS417_08560 aminotransferase low > 88
Pseudomonas sp. RS175 0.40 PFR28_03439 Formyltetrahydrofolate deformylase 0.75 PFR28_00984 Glutamate-pyruvate aminotransferase AlaA — —
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_17895 formyltetrahydrofolate deformylase 0.75 AO356_03090 aminotransferase — —
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS24200 formyltetrahydrofolate deformylase 0.74 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase — —
Pseudomonas fluorescens SBW25 0.40 PFLU_RS24200 formyltetrahydrofolate deformylase 0.74 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase — —
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_665 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.74 Pf1N1B4_261 Aspartate aminotransferase (EC 2.6.1.1) — —
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_1825 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.75 PfGW456L13_2252 Aspartate aminotransferase (EC 2.6.1.1) — —
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_5508 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.75 Pf6N2E2_2446 Aspartate aminotransferase (EC 2.6.1.1) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_4018 Formyltetrahydrofolate deformylase 0.73 Psyr_3615 Aminotransferase, class I and II low > 86
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS33925 formyltetrahydrofolate deformylase 0.65 QEN71_RS22410 pyridoxal phosphate-dependent aminotransferase low > 153
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_4018 Formyltetrahydrofolate deformylase 0.73 Psyr_3615 Aminotransferase, class I and II 0.54 52
Pseudomonas stutzeri RCH2 0.39 Psest_3178 formyltetrahydrofolate deformylase 0.74 Psest_1772 Aspartate/tyrosine/aromatic aminotransferase 0.45 3
Pseudomonas putida KT2440 0.38 PP_1367 formyltetrahydrofolate hydrolase 0.75 PP_1872 glutamate-pyruvate aminotransferase low > 96
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_01917 formyltetrahydrofolate deformylase 0.65 H281DRAFT_00809 alanine-synthesizing transaminase — —
Azospirillum sp. SherDot2 0.38 MPMX19_04711 Formyltetrahydrofolate deformylase 0.19 MPMX19_02392 Aspartate/prephenate aminotransferase low > 112
Pseudomonas sp. S08-1 0.38 OH686_18295 formyltetrahydrofolate deformylase 0.74 OH686_22575 Alanine transaminase low > 80
Magnetospirillum magneticum AMB-1 0.38 AMB_RS18080 formyltetrahydrofolate deformylase 0.17 AMB_RS02875 pyridoxal phosphate-dependent aminotransferase — —
Paraburkholderia graminis OAS925 0.38 ABIE53_000728 formyltetrahydrofolate deformylase 0.65 ABIE53_002025 alanine-synthesizing transaminase low > 113
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS02955 formyltetrahydrofolate deformylase 0.66 BPHYT_RS08950 aminotransferase 0.46 21
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.395.1 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.39 Xcc-8004.1010.1 Aspartate aminotransferase (EC 2.6.1.1) low > 74
Acidovorax sp. GW101-3H11 0.37 Ac3H11_4485 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.66 Ac3H11_1508 Aspartate aminotransferase (EC 2.6.1.1) — —
Azospirillum brasilense Sp245 0.37 AZOBR_RS21685 formyltetrahydrofolate deformylase 0.18 AZOBR_RS12970 aspartate aminotransferase — —
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_1821 formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.17 Ga0059261_2226 Aspartate/tyrosine/aromatic aminotransferase 0.81 7
Variovorax sp. SCN45 0.37 GFF3790 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.65 GFF2803 Alanine transaminase (EC 2.6.1.2) low > 127
Ralstonia solanacearum UW163 0.37 UW163_RS11420 formyltetrahydrofolate deformylase 0.67 UW163_RS13315 pyridoxal phosphate-dependent aminotransferase — —
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS02305 formyltetrahydrofolate deformylase 0.67 RALBFv3_RS15870 pyridoxal phosphate-dependent aminotransferase 0.80 4
Ralstonia solanacearum PSI07 0.36 RPSI07_RS15065 formyltetrahydrofolate deformylase 0.66 RPSI07_RS17495 pyridoxal phosphate-dependent aminotransferase 0.83 2
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_03745 formyltetrahydrofolate deformylase 0.18 CCNA_01603 aspartate aminotransferase low > 67
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS13800 formyltetrahydrofolate deformylase 0.67 RR42_RS12545 aminotransferase low > 128
Variovorax sp. OAS795 0.36 ABID97_RS00100 formyltetrahydrofolate deformylase 0.66 ABID97_RS10885 pyridoxal phosphate-dependent aminotransferase — —
Caulobacter crescentus NA1000 0.36 CCNA_03745 formyltetrahydrofolate deformylase 0.18 CCNA_01603 aspartate aminotransferase low > 66
Rhizobium sp. OAE497 0.36 ABIE40_RS00960 formyltetrahydrofolate deformylase 0.18 ABIE40_RS12925 pyridoxal phosphate-dependent aminotransferase 0.30 78
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS14235 formyltetrahydrofolate deformylase 0.67 ABZR87_RS11440 pyridoxal phosphate-dependent aminotransferase low > 80
Ralstonia solanacearum GMI1000 0.36 RS_RS09460 formyltetrahydrofolate deformylase 0.67 RS_RS06650 pyridoxal phosphate-dependent aminotransferase 0.55 4
Acinetobacter radioresistens SK82 0.36 MPMX26_00378 Formyltetrahydrofolate deformylase 0.67 MPMX26_01871 Glutamate-pyruvate aminotransferase AlaA low > 36
Alteromonas macleodii MIT1002 0.36 MIT1002_00404 Formyltetrahydrofolate deformylase 0.66 MIT1002_02306 Glutamate-pyruvate aminotransferase AlaA low > 70
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF2737 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.65 GFF3934 Aspartate aminotransferase (EC 2.6.1.1) low > 90
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS07970 formyltetrahydrofolate deformylase 0.66 HSERO_RS10455 aminotransferase 0.45 2
Dinoroseobacter shibae DFL-12 0.35 Dshi_2111 formyltetrahydrofolate deformylase (RefSeq) 0.17 Dshi_0762 aminotransferase class I and II (RefSeq) — —
Lysobacter sp. OAE881 0.35 ABIE51_RS07700 formyltetrahydrofolate deformylase 0.43 ABIE51_RS18840 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 62
Rhodopseudomonas palustris CGA009 0.34 TX73_020890 formyltetrahydrofolate deformylase 0.19 TX73_022440 pyridoxal phosphate-dependent aminotransferase — —
Mycobacterium tuberculosis H37Rv 0.33 Rv2964 Probable formyltetrahydrofolate deformylase PurU (formyl-FH(4) hydrolase) 0.63 Rv0337c Probable aspartate aminotransferase AspC (transaminase A) (ASPAT) — —

Not shown: 16 genomes with orthologs for b1232 only; 9 genomes with orthologs for b2290 only