Conservation of cofitness between b4214 and b2020 in Escherichia coli BW25113

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b4214 cysQ PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) 1.0 b2020 hisD histidinol dehydrogenase (NCBI) 0.92 8
Escherichia coli ECOR38 1.00 HEPCGN_10230 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.99 HEPCGN_03220 hisD Histidinol dehydrogenase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03819 '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 0.98 OHPLBJKB_01680 Histidinol dehydrogenase low > 73
Escherichia fergusonii Becca 1.00 EFB2_04314 3'(2'),5'-bisphosphate nucleotidase CysQ 0.98 EFB2_01836 Histidinol dehydrogenase low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS24480 3'(2'),5'-bisphosphate nucleotidase CysQ 0.99 ECOLIN_RS11945 histidinol dehydrogenase
Escherichia coli ECOR27 1.00 NOLOHH_04295 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.99 NOLOHH_15830 hisD Histidinol dehydrogenase low > 57
Escherichia coli BL21 1.00 ECD_04086 3'(2'),5'-bisphosphate nucleotidase 0.99 ECD_01922 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase low > 60
Escherichia coli ECRC62 1.00 BNILDI_07225 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.99 BNILDI_14740 hisD Histidinol dehydrogenase
Escherichia coli ECRC101 1.00 MCAODC_02550 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.98 MCAODC_20425 hisD Histidinol dehydrogenase
Escherichia coli ECRC102 1.00 NIAGMN_09885 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.98 NIAGMN_22460 hisD Histidinol dehydrogenase
Escherichia coli ECRC99 1.00 KEDOAH_16120 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.98 KEDOAH_03635 hisD Histidinol dehydrogenase
Escherichia coli ECRC98 1.00 JDDGAC_15675 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.98 JDDGAC_28625 hisD Histidinol dehydrogenase
Escherichia coli ECRC101 1.00 OKFHMN_12035 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.98 OKFHMN_24515 hisD Histidinol dehydrogenase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF868 '3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)' transl_table=11 0.93 GFF3912 Histidinol dehydrogenase (EC 1.1.1.23) low > 78
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3401 3'(2'),5'-bisphosphate nucleotidase, bacterial 0.89 EX28DRAFT_0539 histidinol dehydrogenase low > 76
Pantoea sp. MT58 0.85 IAI47_02695 3'(2'),5'-bisphosphate nucleotidase CysQ 0.82 IAI47_07090 histidinol dehydrogenase 0.92 17
Enterobacter sp. TBS_079 0.84 MPMX20_00492 3'(2'),5'-bisphosphate nucleotidase CysQ 0.89 MPMX20_03002 Histidinol dehydrogenase 0.51 23
Klebsiella michiganensis M5al 0.84 BWI76_RS02735 3'(2'),5'-bisphosphate nucleotidase CysQ 0.88 BWI76_RS18925 histidinol dehydrogenase 0.68 48
Erwinia tracheiphila SCR3 0.82 LU632_RS02085 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.81 LU632_RS08945 hisD histidinol dehydrogenase low > 74
Rahnella sp. WP5 0.76 EX31_RS08720 3'(2'),5'-bisphosphate nucleotidase CysQ 0.79 EX31_RS11440 histidinol dehydrogenase 0.93 3
Pectobacterium carotovorum WPP14 0.76 HER17_RS03955 3'(2'),5'-bisphosphate nucleotidase CysQ 0.80 HER17_RS12230 histidinol dehydrogenase 0.89 41
Dickeya dianthicola ME23 0.75 DZA65_RS18320 3'(2'),5'-bisphosphate nucleotidase CysQ 0.79 DZA65_RS10055 histidinol dehydrogenase 0.54 62
Dickeya dadantii 3937 0.74 DDA3937_RS17180 3'(2'),5'-bisphosphate nucleotidase CysQ 0.80 DDA3937_RS09735 histidinol dehydrogenase 0.79 11
Dickeya dianthicola 67-19 0.74 HGI48_RS17235 3'(2'),5'-bisphosphate nucleotidase CysQ 0.79 HGI48_RS09745 histidinol dehydrogenase low > 71
Serratia liquefaciens MT49 0.73 IAI46_01745 3'(2'),5'-bisphosphate nucleotidase CysQ 0.85 IAI46_08210 histidinol dehydrogenase low > 86
Shewanella loihica PV-4 0.51 Shew_1427 3'(2'),5'-bisphosphate nucleotidase (RefSeq) 0.57 Shew_2198 histidinol dehydrogenase (RefSeq) 0.90 29
Shewanella amazonensis SB2B 0.48 Sama_2232 cysQ protein (RefSeq) 0.59 Sama_1942 hisD histidinol dehydrogenase (RefSeq) 0.86 47
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_2344 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) 0.25 B158DRAFT_2293 histidinol dehydrogenase low > 40
Shewanella sp. ANA-3 0.45 Shewana3_2791 3'(2'),5'-bisphosphate nucleotidase (RefSeq) 0.56 Shewana3_1853 hisD histidinol dehydrogenase (RefSeq) 0.81 47
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_10995 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 OKGIIK_04950 hisD histidinol dehydrogenase low > 52
Shewanella oneidensis MR-1 0.44 SO1655 cysQ-2 cysQ protein (NCBI ptt file) 0.57 SO2073 hisD histidinol dehydrogenase (NCBI ptt file) 0.90 9
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.1562.1 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) 0.48 Xcc-8004.2948.1 Histidinol dehydrogenase (EC 1.1.1.23) low > 74
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_3885 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) 0.33 Pf6N2E2_3252 Histidinol dehydrogenase (EC 1.1.1.23) low > 103
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_10075 3'(2'),5'-bisphosphate nucleotidase CysQ 0.33 AO356_06965 histidinol dehydrogenase 0.48 26
Marinobacter adhaerens HP15 0.42 HP15_2405 3'(2'), 5'-bisphosphate nucleotidase 0.33 HP15_2428 histidinol dehydrogenase
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS17065 3'(2'),5'-bisphosphate nucleotidase 0.44 CA265_RS03635 histidinol dehydrogenase low > 88
Alteromonas macleodii MIT1002 0.42 MIT1002_01272 3'(2'),5'-bisphosphate nucleotidase CysQ 0.54 MIT1002_02633 Histidinol dehydrogenase
Lysobacter sp. OAE881 0.42 ABIE51_RS05275 3'(2'),5'-bisphosphate nucleotidase CysQ 0.49 ABIE51_RS13325 histidinol dehydrogenase 0.96 8
Pseudomonas sp. RS175 0.42 PFR28_04887 '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 0.33 PFR28_00187 Histidinol dehydrogenase low > 88
Pseudomonas putida KT2440 0.41 PP_0261 adenosine-3'(2'),5'-bisphosphate nucleotidase 0.32 PP_0966 Histidinol dehydrogenase 0.19 73
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_403 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) 0.33 PfGW456L13_5000 Histidinol dehydrogenase (EC 1.1.1.23) low > 87
Pseudomonas simiae WCS417 0.41 PS417_01295 adenosine-3'(2'),5'-bisphosphate nucleotidase 0.33 PS417_04420 histidinol dehydrogenase
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS01390 3'(2'),5'-bisphosphate nucleotidase CysQ 0.33 PFLU_RS04470 histidinol dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS01390 3'(2'),5'-bisphosphate nucleotidase CysQ 0.33 PFLU_RS04470 histidinol dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_11850 3'(2'),5'-bisphosphate nucleotidase CysQ 0.33 AO353_05110 histidinol dehydrogenase 0.36 49
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1668 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) 0.33 Pf1N1B4_1066 Histidinol dehydrogenase (EC 1.1.1.23)
Azospirillum sp. SherDot2 0.40 MPMX19_01084 3'(2'),5'-bisphosphate nucleotidase CysQ 0.32 MPMX19_05543 Histidinol dehydrogenase
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS04130 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 LRK54_RS01605 histidinol dehydrogenase low > 59
Rhodanobacter denitrificans MT42 0.40 LRK55_RS03900 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 LRK55_RS01385 histidinol dehydrogenase low > 63
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_4940 3'(2'),5'-bisphosphate nucleotidase 0.33 Psyr_4133 histidinol dehydrogenase
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_4940 3'(2'),5'-bisphosphate nucleotidase 0.33 Psyr_4133 histidinol dehydrogenase 0.63 6
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS10205 3'(2'),5'-bisphosphate nucleotidase CysQ 0.53 ABZR86_RS06730 histidinol dehydrogenase 0.84 13
Pseudomonas stutzeri RCH2 0.38 Psest_3960 3'(2'),5'-bisphosphate nucleotidase, bacterial 0.34 Psest_3298 histidinol dehydrogenase low > 67
Pseudomonas sp. S08-1 0.38 OH686_14315 3'(2'),5'-bisphosphate nucleotidase 0.34 OH686_08470 Histidinol dehydrogenase
Magnetospirillum magneticum AMB-1 0.37 AMB_RS18775 3'(2'),5'-bisphosphate nucleotidase 0.34 AMB_RS16905 histidinol dehydrogenase
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_4407 3'(2'),5'-bisphosphate nucleotidase, bacterial 0.47 Echvi_2459 histidinol dehydrogenase low > 79
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_13735 3'(2'),5'-bisphosphate nucleotidase CysQ 0.63 CSW01_05750 histidinol dehydrogenase low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.36 CA264_08565 3'(2'),5'-bisphosphate nucleotidase 0.45 CA264_05030 histidinol dehydrogenase low > 74
Dinoroseobacter shibae DFL-12 0.36 Dshi_3574 3'(2'),5'-bisphosphate nucleotidase (RefSeq) 0.34 Dshi_0979 Histidinol dehydrogenase (RefSeq)
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS02275 3'(2'),5'-bisphosphate nucleotidase CysQ 0.50 ABI39_RS11835 histidinol dehydrogenase low > 72
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS02960 3'(2'),5'-bisphosphate nucleotidase CysQ 0.51 HMPREF1058_RS15875 histidinol dehydrogenase low > 67
Phaeobacter inhibens DSM 17395 0.35 PGA1_c34500 3'(2'),5'-bisphosphate nucleotidase CysQ 0.33 PGA1_c31190 histidinol dehydrogenase HisD
Sinorhizobium meliloti 1021 0.35 SMc01952 transmembrane protein 0.35 SMc02307 histidinol dehydrogenase low > 103
Rhodospirillum rubrum S1H 0.34 Rru_A0445 3(2),5 -bisphosphate nucleotidase (NCBI) 0.31 Rru_A2771 Histidinol dehydrogenase (NCBI)
Agrobacterium fabrum C58 0.34 Atu2428 exopolysaccharide production protein PssB 0.34 Atu0537 histidinol dehydrogenase low > 89
Bacteroides thetaiotaomicron VPI-5482 0.34 BT0411 CysQ, sulfite synthesis pathway protein (NCBI ptt file) 0.52 BT0201 histidinol dehydrogenase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.33 BACOVA_01765 hypothetical protein 0.53 BACOVA_01234 histidinol dehydrogenase low > 94
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS01685 3'(2'),5'-bisphosphate nucleotidase CysQ 0.48 HMPREF1078_RS02450 histidinol dehydrogenase low > 61
Rhizobium sp. OAE497 0.33 ABIE40_RS14720 3'(2'),5'-bisphosphate nucleotidase CysQ 0.34 ABIE40_RS02725 histidinol dehydrogenase low > 107
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS04320 3'(2'),5'-bisphosphate nucleotidase CysQ 0.50 HMPREF1181_RS04860 histidinol dehydrogenase low > 56
Acinetobacter radioresistens SK82 0.30 MPMX26_01312 3'(2'),5'-bisphosphate nucleotidase CysQ 0.32 MPMX26_02587 Histidinol dehydrogenase
Rhodopseudomonas palustris CGA009 0.29 TX73_008350 3'(2'),5'-bisphosphate nucleotidase CysQ 0.32 TX73_023540 histidinol dehydrogenase
Caulobacter crescentus NA1000 0.28 CCNA_03582 3'(2'),5'-bisphosphate nucleotidase CysQ 0.27 CCNA_02431 histidinol dehydrogenase
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_03582 3'(2'),5'-bisphosphate nucleotidase CysQ 0.27 CCNA_02431 histidinol dehydrogenase
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS15260 3'(2'),5'-bisphosphate nucleotidase CysQ 0.38 A4249_RS10695 histidinol dehydrogenase
Desulfovibrio vulgaris Miyazaki F 0.26 DvMF_2027 inositol monophosphatase (RefSeq) 0.30 DvMF_2814 hisD histidinol dehydrogenase (RefSeq) low > 51
Bosea sp. OAE506 0.21 ABIE41_RS11005 3'(2'),5'-bisphosphate nucleotidase CysQ 0.32 ABIE41_RS24015 histidinol dehydrogenase low > 77
Synechococcus elongatus PCC 7942 0.19 Synpcc7942_0173 cysQ 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase-like 0.33 Synpcc7942_1519 hisD histidinol dehydrogenase

Not shown: 1 genomes with orthologs for b4214 only; 24 genomes with orthologs for b2020 only