Homologs of Psyr_4130 from Pseudomonas syringae pv. syringae B728a

Peptidase S1, chymotrypsin:PDZ/DHR/GLGF
SEED: Outer membrane stress sensor protease DegS
KEGG: serine protease DegS

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF strong 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF cofit 100 100
o Pseudomonas sp. DMC3 GFF1846 Serine endoprotease DegS cofit 90 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1061 Outer membrane stress sensor protease DegS no data 88 98
o Pseudomonas sp. BP01 JOY50_RS15285 algW Do family serine endopeptidase AlgW insig. 87 98
o Pseudomonas simiae WCS417 PS417_03705 2-alkenal reductase sig. 88 98
o Pseudomonas sp. SVBP6 COO64_RS11715 algW Do family serine endopeptidase AlgW insig. 88 98
o Pseudomonas putida KT2440 PP_1301 quality control serine endoprotease DegS strong 87 98
o Pseudomonas sp. RS175 PFR28_00191 Serine endoprotease DegS strong 90 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4998 Outer membrane stress sensor protease DegS sig. 89 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5255 Outer membrane stress sensor protease DegS strong 89 98
o Pseudomonas fluorescens FW300-N2C3 AO356_16655 2-alkenal reductase strong 89 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00947 Serine endoprotease DegS cofit 88 98
o Pseudomonas fluorescens SBW25 PFLU_RS03755 PDZ domain-containing protein sig. 88 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS03755 PDZ domain-containing protein strong 88 98
o Pseudomonas fluorescens FW300-N2E3 AO353_05090 2-alkenal reductase sig. 89 98
o Pseudomonas sp. S08-1 OH686_08460 Outer membrane stress sensor protease DegS strong 79 97
o Pseudomonas aeruginosa PA14 IKLFDK_01860 protease AlgW insig. 76 97
o Pseudomonas stutzeri RCH2 Psest_3296 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain strong 74 99
o Ralstonia solanacearum GMI1000 RS_RS14690 PDZ domain-containing protein cofit 59 87
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS06745 2-alkenal reductase strong 54 98
o Ralstonia solanacearum UW163 UW163_RS06870 2-alkenal reductase insig. 54 98
o Ralstonia solanacearum PSI07 RPSI07_RS10490 PDZ domain-containing protein insig. 59 86
o Burkholderia phytofirmans PsJN BPHYT_RS17640 2-alkenal reductase strong 53 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS02400 Do family serine endopeptidase strong 59 86
o Paraburkholderia sabiae LMG 24235 QEN71_RS27795 Do family serine endopeptidase strong 54 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05667 serine protease DegQ strong 52 98
o Paraburkholderia graminis OAS925 ABIE53_003687 serine protease DegQ strong 51 99
o Herbaspirillum seropedicae SmR1 HSERO_RS20260 2-alkenal reductase insig. 52 98
o Cupriavidus basilensis FW507-4G11 RR42_RS18840 2-alkenal reductase strong 59 83
o Methylophilus sp. DMC18 GFF1575 Periplasmic pH-dependent serine endoprotease DegQ no data 52 96
o Dechlorosoma suillum PS Dsui_1426 periplasmic serine protease, Do/DeqQ family cofit 51 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1300 Outer membrane stress sensor protease DegS insig. 52 95
o Acinetobacter baumannii LAC-4 RR41_RS05700 trypsin-like peptidase domain-containing protein no data 52 97
o Acidovorax sp. GW101-3H11 Ac3H11_4743 Outer membrane stress sensor protease DegS no data 49 98
o Castellaniella sp019104865 MT123 ABCV34_RS12650 trypsin-like peptidase domain-containing protein strong 51 93
o Acinetobacter radioresistens SK82 MPMX26_00998 Serine endoprotease DegS cofit 51 97
o Variovorax sp. SCN45 GFF5365 Outer membrane stress sensor protease DegS insig. 48 95
o Variovorax sp. OAS795 ABID97_RS23065 trypsin-like peptidase domain-containing protein strong 48 95
  Rhodopseudomonas palustris CGA009 TX73_016660 DegQ family serine endoprotease insig. 50 87
  Magnetospirillum magneticum AMB-1 AMB_RS17615 PDZ domain-containing protein cofit 48 84
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS09885 trypsin-like peptidase domain-containing protein insig. 44 97
  Rhodospirillum rubrum S1H Rru_A2662 Peptidase S1C, Do (NCBI) insig. 48 81
  Bosea sp. OAE506 ABIE41_RS14685 Do family serine endopeptidase no data 48 89
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS17545 DegQ family serine endoprotease sig. 48 80
  Pseudomonas sp. BP01 JOY50_RS14680 DegQ family serine endoprotease insig. 45 83
  Pseudomonas putida KT2440 PP_1430 putative periplasmic serine endoprotease DegP-like strong 45 83
  Pseudomonas sp. SVBP6 COO64_RS16540 DegQ family serine endoprotease insig. 45 83
  Pseudomonas aeruginosa PA14 IKLFDK_03285 serine protease MucD sig. 46 81
  Rhodanobacter sp. FW510-T8 OKGIIK_00150 Periplasmic serine endoprotease DegP-like insig. 48 82
  Pseudomonas stutzeri RCH2 Psest_3096 periplasmic serine protease, Do/DeqQ family no data 46 85
o Azospirillum brasilense Sp245 AZOBR_RS00340 peptidase sig. 43 96
  Pseudomonas sp. S08-1 OH686_20060 HtrA protease/chaperone protein cofit 44 83
  Azospirillum sp. SherDot2 MPMX19_02380 Periplasmic pH-dependent serine endoprotease DegQ insig. 47 79
  Pseudomonas syringae pv. syringae B728a Psyr_3955 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF strong 44 83
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3955 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF strong 44 83
  Shewanella loihica PV-4 Shew_3296 protease Do (RefSeq) strong 47 77
  Rhizobium sp. OAE497 ABIE40_RS08040 DegQ family serine endoprotease insig. 45 86
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS17720 Do family serine endopeptidase insig. 46 82
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS06430 Do family serine endopeptidase insig. 46 82
  Rhodospirillum rubrum S1H Rru_A0024 peptidase (NCBI) sig. 47 80
  Pseudomonas fluorescens SBW25 PFLU_RS07245 DegQ family serine endoprotease cofit 44 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07245 DegQ family serine endoprotease strong 44 84
  Rhodanobacter denitrificans MT42 LRK55_RS06175 Do family serine endopeptidase cofit 46 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4513 HtrA protease/chaperone protein sig. 45 83
  Agrobacterium fabrum C58 Atu1915 htrA family protein insig. 45 88
  Azospirillum brasilense Sp245 AZOBR_RS17805 serine protease insig. 49 73
  Pseudomonas sp. DMC3 GFF2280 Periplasmic serine endoprotease DegP insig. 45 83
o Shewanella sp. ANA-3 Shewana3_0689 DegS serine peptidase (RefSeq) strong 46 95
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3326 HtrA protease/chaperone protein no data 44 86
  Pseudomonas fluorescens FW300-N2C3 AO356_04560 serine peptidase sig. 45 83
  Shewanella oneidensis MR-1 SO3942 serine protease, HtrA/DegQ/DegS family (NCBI ptt file) no data 48 74
  Shewanella sp. ANA-3 Shewana3_0690 peptidase Do (RefSeq) insig. 47 80
o Rahnella sp. WP5 EX31_RS12470 outer membrane-stress sensor serine endopeptidase DegS no data 44 94
  Pseudomonas fluorescens FW300-N2E3 AO353_17640 serine peptidase sig. 44 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2753 HtrA protease/chaperone protein strong 44 83
  Shewanella amazonensis SB2B Sama_3073 serine protease (RefSeq) strong 43 93
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01575 Periplasmic serine endoprotease DegP cofit 44 84
o Enterobacter sp. TBS_079 MPMX20_04139 Serine endoprotease DegS no data 44 96
  Shewanella amazonensis SB2B Sama_3074 protease DegS (RefSeq) strong 51 69
  Sinorhizobium meliloti 1021 SMc02365 protease precursor protein strong 40 87
o Enterobacter asburiae PDN3 EX28DRAFT_3284 periplasmic serine pepetdase DegS no data 45 88
  Pseudomonas simiae WCS417 PS417_07135 serine peptidase no data 43 84
  Shewanella oneidensis MR-1 SO3943 degS protease DegS (NCBI ptt file) strong 45 94
o Escherichia fergusonii Becca EFB2_00595 Serine endoprotease DegS insig. 44 97
o Escherichia coli Nissle 1917 ECOLIN_RS18550 outer membrane-stress sensor serine endopeptidase DegS sig. 44 97
  Agrobacterium fabrum C58 Atu2043 htrA family protein sig. 44 84
  Pseudomonas sp. RS175 PFR28_00693 Periplasmic serine endoprotease DegP strong 43 83
  Azospirillum sp. SherDot2 MPMX19_00793 hypothetical protein cofit 42 83
  Rhodospirillum rubrum S1H Rru_A2201 Peptidase S1C, Do (NCBI) sig. 44 87
  Bosea sp. OAE506 ABIE41_RS21445 trypsin-like peptidase domain-containing protein insig. 43 83
o Escherichia coli BL21 ECD_03095 serine endoprotease, periplasmic no data 44 97
o Escherichia coli ECRC62 BNILDI_01935 degS outer membrane-stress sensor serine endopeptidase DegS no data 44 97
  Rahnella sp. WP5 EX31_RS12475 Do family serine endopeptidase insig. 46 81
  Herbaspirillum seropedicae SmR1 HSERO_RS21975 peptidase insig. 45 80
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07900 Do family serine endopeptidase cofit 44 84
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09430 outer membrane-stress sensor serine endopeptidase DegS no data 44 92
  Lysobacter sp. OAE881 ABIE51_RS03265 trypsin-like peptidase domain-containing protein strong 46 83
  Pectobacterium carotovorum WPP14 HER17_RS19985 serine endoprotease DegQ insig. 45 79
o Escherichia coli ECOR27 NOLOHH_09600 degS outer membrane-stress sensor serine endopeptidase DegS no data 43 97