| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1453 | | Xylose activator XylR (AraC family) | insig. | 100 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_28495 | | AraC family transcriptional regulator | strong | 97 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_02347 | | Xylose operon regulatory protein | strong | 95 | 99 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_2882 | | transcriptional regulator, AraC family | insig. | 92 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2882 | | transcriptional regulator, AraC family | insig. | 92 | 100 |
| o | Pseudomonas sp. DMC3 | GFF1158 | | Xylose operon regulatory protein | insig. | 92 | 98 |
| o | Pseudomonas simiae WCS417 | PS417_10950 | | AraC family transcriptional regulator | strong | 91 | 98 |
| o | Pseudomonas orientalis W4I3 | QF045_RS13270 | | XylR family transcriptional regulator | cofit | 90 | 99 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02459 | | Xylose operon regulatory protein | insig. | 90 | 99 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS11310 | | DNA-binding transcriptional regulator | strong | 91 | 99 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS11310 | | DNA-binding transcriptional regulator | strong | 91 | 99 |
| o | Pseudomonas sp. FW215-L2 | GFF3737 | | Xylose operon regulatory protein | strong | 86 | 98 |
| o | Collimonas humicola GW821-FHT01A05 | MPMX01_01246 | | Xylose operon regulatory protein | strong | 74 | 99 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS22455 | | AraC family transcriptional regulator | strong | 70 | 97 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS18215 | | DNA-binding transcriptional regulator | sig. | 66 | 98 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004928 | | LacI family transcriptional regulator | strong | 66 | 99 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS32830 | | AraC family transcriptional regulator | insig. | 65 | 99 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03875 | | transcriptional regulator, AraC family | insig. | 66 | 98 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS25880 | | DNA-binding transcriptional regulator | strong | 66 | 98 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS14435 | | DNA-binding transcriptional regulator | insig. | 60 | 96 |
| o | Rahnella sp. WP5 | EX31_RS09745 | | XylR family transcriptional regulator | strong | 48 | 96 |
| o | Pantoea sp. MT58 | IAI47_00175 | | XylR family transcriptional regulator | insig. | 48 | 96 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS00155 | xylR | D-xylose utilization transcriptional activator XylR | cofit | 48 | 96 |
| o | Serratia liquefaciens MT49 | IAI46_00300 | | DNA-binding transcriptional regulator | insig. | 47 | 96 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_3834 | | Transcriptional regulators | insig. | 47 | 96 |
| o | Dickeya dianthicola 67-19 | HGI48_RS00330 | | XylR family transcriptional regulator | insig. | 48 | 96 |
| o | Dickeya dianthicola ME23 | DZA65_RS00330 | | DNA-binding transcriptional regulator | insig. | 48 | 96 |
| o | Enterobacter sp. TBS_079 | MPMX20_00161 | | Xylose operon regulatory protein | strong | 47 | 96 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_07795 | | XylR family transcriptional regulator | insig. | 47 | 96 |
| o | Klebsiella pneumoniae MRSN742743 | GJGHJB_00182 | xylR | Xylose activator XylR (AraC family) | insig. | 47 | 96 |
| o | Dickeya dadantii 3937 | DDA3937_RS20915 | | DNA-binding transcriptional regulator | insig. | 48 | 96 |
| o | Escherichia coli BL21 | ECD_03421 | | xylose divergent operon transcriptional activator | insig. | 47 | 96 |
| o | Escherichia coli ECOR27 | NOLOHH_07880 | xylR | DNA-binding transcriptional regulator XylR | insig. | 47 | 96 |
| o | Escherichia coli ECOR38 | HEPCGN_14820 | xylR | DNA-binding transcriptional regulator XylR | insig. | 47 | 96 |
| o | Escherichia coli ECRC100 | OKFHMN_15935 | xylR | DNA-binding transcriptional regulator XylR | cofit | 47 | 96 |
| o | Escherichia coli ECRC101 | MCAODC_06450 | xylR | DNA-binding transcriptional regulator XylR | insig. | 47 | 96 |
| o | Escherichia coli ECRC102 | NIAGMN_13695 | xylR | DNA-binding transcriptional regulator XylR | insig. | 47 | 96 |
| o | Escherichia coli ECRC62 | BNILDI_03665 | xylR | DNA-binding transcriptional regulator XylR | insig. | 47 | 96 |
| o | Escherichia coli ECRC98 | JDDGAC_19565 | xylR | DNA-binding transcriptional regulator XylR | insig. | 47 | 96 |
| o | Escherichia coli ECRC99 | KEDOAH_12215 | xylR | DNA-binding transcriptional regulator XylR | no data | 47 | 96 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00135 | | Xylose operon regulatory protein | insig. | 47 | 96 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS20410 | | D-xylose utilization transcriptional activator XylR | insig. | 47 | 96 |
| o | Escherichia coli BW25113 | b3569 | xylR | DNA-binding transcriptional activator, xylose-binding (NCBI) | strong | 47 | 96 |
| o | Escherichia fergusonii Becca | EFB2_00238 | | Xylose operon regulatory protein | insig. | 47 | 96 |
| o | Klebsiella michiganensis M5al | BWI76_RS27045 | | XylR family transcriptional regulator | strong | 47 | 96 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS21065 | | XylR family transcriptional regulator | insig. | 47 | 96 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF442 | | Xylose activator XylR (AraC family) | insig. | 46 | 98 |
| | Collimonas humicola GW821-FHT01A05 | MPMX01_02565 | | Xylose operon regulatory protein | insig. | 67 | 46 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03406 | | transcriptional regulator, AraC family | insig. | 25 | 96 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3418 | | Transcriptional regulators | insig. | 24 | 97 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3609 | | transcriptional regulator (NCBI ptt file) | insig. | 25 | 96 |
| | Collimonas humicola GW821-FHT01A05 | MPMX01_02679 | | HTH-type transcriptional repressor CytR | insig. | 31 | 44 |
| | Collimonas humicola GW821-FHT01A05 | MPMX01_02754 | | HTH-type transcriptional regulator CdhR | insig. | 27 | 29 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS11895 | | AraC family transcriptional regulator | insig. | 29 | 26 |
| | Pseudomonas sp. BP01 | JOY50_RS06255 | | LacI family DNA-binding transcriptional regulator | insig. | 31 | 46 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS11030 | | GlxA family transcriptional regulator | insig. | 29 | 37 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23380 | | GlxA family transcriptional regulator | insig. | 34 | 25 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06477 | | transcriptional regulator, AraC family | insig. | 34 | 25 |
| | Ralstonia solanacearum GMI1000 | RS_RS05455 | | GlxA family transcriptional regulator | sig. | 29 | 38 |
| | Pseudomonas sp. S08-1 | OH686_18570 | | Transcriptional regulator, AraC family | insig. | 32 | 29 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS07690 | | AraC family transcriptional regulator | sig. | 33 | 25 |
| | Paraburkholderia graminis OAS925 | ABIE53_001768 | | transcriptional regulator GlxA family with amidase domain | strong | 33 | 25 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10510 | | AraC family transcriptional regulator | no data | 29 | 26 |
| | Alteromonas macleodii MIT1002 | MIT1002_02553 | | Carnitine catabolism transcriptional activator | insig. | 30 | 26 |
| | Xanthobacter sp. DMC5 | GFF2016 | | HTH-type transcriptional regulator CdhR | insig. | 42 | 19 |
| | Serratia liquefaciens MT49 | IAI46_16615 | | helix-turn-helix domain-containing protein | insig. | 30 | 33 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS25305 | | LacI family DNA-binding transcriptional regulator | insig. | 26 | 55 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2811 | | ABC-type sugar transport system, periplasmic component | strong | 26 | 49 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS08030 | | GlxA family transcriptional regulator | insig. | 31 | 27 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS25095 | | AraC family transcriptional regulator | insig. | 30 | 27 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_13000 | cytR | DNA-binding transcriptional regulator CytR | insig. | 30 | 43 |
| | Caulobacter crescentus NA1000 | CCNA_01195 | | LacI-family transcriptional regulator | strong | 30 | 57 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_01195 | | LacI-family transcriptional regulator | cofit | 30 | 57 |
| | Lysobacter sp. OAE881 | ABIE51_RS03340 | | AraC family transcriptional regulator | insig. | 26 | 33 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_09200 | | HTH-type transcriptional activator RhaS | insig. | 31 | 26 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_04926 | rhaS | HTH-type transcriptional activator RhaS | insig. | 31 | 26 |
| | Erwinia tracheiphila SCR3 | LU632_RS19660 | cytR | DNA-binding transcriptional regulator CytR | insig. | 30 | 43 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3073 | | Transcriptional regulators | strong | 30 | 49 |
| | Escherichia coli ECRC100 | OKFHMN_13890 | rhaS | HTH-type transcriptional activator RhaS | insig. | 27 | 34 |
| | Escherichia coli ECRC101 | MCAODC_04390 | rhaS | HTH-type transcriptional activator RhaS | insig. | 27 | 34 |
| | Escherichia coli ECRC102 | NIAGMN_11645 | rhaS | HTH-type transcriptional activator RhaS | cofit | 27 | 34 |
| | Escherichia coli ECRC98 | JDDGAC_17515 | rhaS | HTH-type transcriptional activator RhaS | insig. | 27 | 34 |
| | Escherichia coli ECRC99 | KEDOAH_14265 | rhaS | HTH-type transcriptional activator RhaS | no data | 27 | 34 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00041 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 23 | 47 |
| | Sinorhizobium meliloti 1021 | SM_b21706 | | LacI family transcriptional regulator | insig. | 32 | 51 |
| | Escherichia coli BL21 | ECD_03791 | | transcriptional activator of rhaBAD and rhaT | insig. | 27 | 34 |
| | Escherichia fergusonii Becca | EFB2_04712 | | HTH-type transcriptional activator RhaS | insig. | 27 | 34 |
| | Escherichia coli ECOR27 | NOLOHH_06020 | rhaS | HTH-type transcriptional activator RhaS | strong | 27 | 34 |
| | Escherichia coli ECRC62 | BNILDI_05505 | rhaS | HTH-type transcriptional activator RhaS | insig. | 27 | 34 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04145 | | HTH-type transcriptional activator RhaS | insig. | 27 | 34 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS22500 | | HTH-type transcriptional activator RhaS | strong | 27 | 34 |
| | Escherichia coli BW25113 | b3905 | rhaS | DNA-binding transcriptional activator, L-rhamnose-binding (NCBI) | insig. | 27 | 34 |
| | Rahnella sp. WP5 | EX31_RS17960 | | AraC family transcriptional regulator | insig. | 27 | 28 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS14850 | | helix-turn-helix domain-containing protein | insig. | 34 | 25 |
| | Pseudomonas sp. SVBP6 | COO64_RS23480 | | response regulator transcription factor | insig. | 30 | 31 |
| | Escherichia coli ECOR38 | HEPCGN_12530 | rhaS | HTH-type transcriptional activator RhaS | insig. | 27 | 34 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02049 | | sugar-binding domain protein | strong | 24 | 50 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02454 | | transcriptional regulator, AraC family with amidase-like domain | insig. | 30 | 27 |
| | Paraburkholderia graminis OAS925 | ABIE53_006161 | | transcriptional regulator GlxA family with amidase domain | insig. | 30 | 27 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37540 | | AraC family transcriptional regulator | cofit | 26 | 28 |
| | Pseudomonas sp. RS175 | PFR28_00233 | | HTH-type transcriptional activator RhaS | insig. | 34 | 24 |
| | Agrobacterium fabrum C58 | Atu5078 | | LacI family transcription regulator | sig. | 26 | 56 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS04680 | | LacI family transcriptional regulator | insig. | 25 | 44 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS19225 | | LacI family transcriptional regulator | insig. | 31 | 54 |
| | Pseudomonas sp. SVBP6 | COO64_RS00185 | | GlxA family transcriptional regulator | insig. | 36 | 23 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4708 | | transcriptional regulator, AraC family with amidase-like domain protein | insig. | 36 | 23 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4708 | | transcriptional regulator, AraC family with amidase-like domain protein | insig. | 36 | 23 |
| | Pseudomonas putida KT2440 | PP_0298 | | AraC-family transcriptional regulator | strong | 36 | 23 |
| | Rahnella sp. WP5 | EX31_RS00245 | | HTH-type transcriptional activator RhaS | insig. | 34 | 24 |
| | Pseudomonas protegens RBAN4 | FABNJH_14735 | | HTH araC/xylS-type domain-containing protein | insig. | 33 | 26 |
| | Pseudomonas sp. BP01 | JOY50_RS25545 | | GlxA family transcriptional regulator | insig. | 36 | 23 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS11205 | | hybrid sensor histidine kinase/response regulator | insig. | 30 | 26 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_10485 | | superoxide response transcriptional regulator SoxS | insig. | 35 | 26 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_04677 | soxS | superoxide response transcriptional regulator SoxS | insig. | 35 | 26 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03396 | | AraC-type DNA-binding protein | insig. | 30 | 25 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_05636 | gbdR | HTH-type transcriptional regulator GbdR | strong | 36 | 22 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26530 | | HTH-type transcriptional regulator GbdR | strong | 36 | 22 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_05712 | gbdR | HTH-type transcriptional regulator GbdR | strong | 36 | 22 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0267 | | two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) | sig. | 35 | 20 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4242 | | AraC-type DNA-binding domain-containing proteins | insig. | 32 | 27 |
| | Enterobacter sp. TBS_079 | MPMX20_00281 | | Regulatory protein SoxS | strong | 32 | 27 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1090 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 36 | 22 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2751 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 36 | 22 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2425 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | strong | 36 | 22 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_13825 | | AraC family transcriptional regulator | strong | 36 | 22 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_25050 | | AraC family transcriptional regulator | insig. | 35 | 23 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1007 | | Transcriptional regulator, AraC family | insig. | 34 | 25 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4029 | | transcriptional regulator, LacI family | strong | 31 | 37 |
| | Ralstonia solanacearum GMI1000 | RS_RS05020 | | LacI family transcriptional regulator | sig. | 31 | 54 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS33620 | | GlxA family transcriptional regulator | insig. | 29 | 31 |
| | Enterobacter sp. TBS_079 | MPMX20_02241 | | HTH-type transcriptional activator RhaS | sig. | 29 | 25 |
| | Klebsiella michiganensis M5al | BWI76_RS00690 | | transcriptional activator RhaS | strong | 28 | 25 |
| | Enterobacter sp. TBS_079 | MPMX20_04562 | | HTH-type transcriptional activator RhaS | strong | 27 | 29 |
| | Pectobacterium carotovorum WPP14 | HER17_RS00865 | | DNA-binding transcriptional regulator CytR | cofit | 27 | 46 |
| | Pseudomonas sp. FW215-L2 | GFF134 | | HTH-type transcriptional regulator CdhR | strong | 36 | 22 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS27955 | | GlxA family transcriptional regulator | insig. | 36 | 22 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS27955 | | GlxA family transcriptional regulator | strong | 36 | 22 |
| | Pseudomonas sp. DMC3 | GFF130 | | HTH-type transcriptional regulator CdhR | insig. | 36 | 22 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05387 | | HTH-type transcriptional regulator CdhR | cofit | 36 | 22 |
| | Pseudomonas sp. RS175 | PFR28_04161 | | HTH-type transcriptional regulator CdhR | strong | 36 | 22 |
| | Pseudomonas simiae WCS417 | PS417_26305 | | AraC family transcriptional regulator | sig. | 36 | 22 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_07770 | | AraC family transcriptional regulator | strong | 36 | 22 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4686 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | strong | 36 | 22 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4948 | | Transcriptional regulator, AraC family | sig. | 34 | 24 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5308 | | Transcriptional regulator, AraC family | strong | 31 | 24 |
| | Erwinia amylovora T8 | OLJFJH_05415 | | ribose operon transcriptional repressor RbsR | insig. | 29 | 45 |
| | Xanthobacter sp. DMC5 | GFF4033 | | HTH-type transcriptional activator RhaS | insig. | 28 | 26 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_13975 | | LacI family transcriptional regulator | strong | 28 | 43 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00103 | | transcriptional regulator, LacI family | insig. | 26 | 44 |
| | Pseudomonas protegens RBAN4 | FABNJH_29035 | glxA | Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 36 | 22 |
| | Pseudomonas orientalis W4I3 | QF045_RS00690 | | GlxA family transcriptional regulator | insig. | 36 | 22 |
| | Rhizobium sp. OAE497 | ABIE40_RS25505 | | LacI family DNA-binding transcriptional regulator | insig. | 29 | 52 |
| | Pseudomonas sp. S08-1 | OH686_02580 | | hypothetical protein | insig. | 27 | 30 |
| | Shewanella amazonensis SB2B | Sama_0294 | | LacI family transcription regulator (RefSeq) | strong | 22 | 48 |
| | Klebsiella michiganensis M5al | BWI76_RS01995 | | AraC family transcriptional regulator | insig. | 35 | 26 |
| | Klebsiella michiganensis M5al | BWI76_RS12430 | | AraC family transcriptional regulator | insig. | 39 | 20 |
| | Pseudomonas stutzeri RCH2 | Psest_3080 | | AraC-type DNA-binding domain-containing proteins | sig. | 33 | 27 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS21060 | | GlxA family transcriptional regulator | insig. | 30 | 26 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_09205 | | HTH-type transcriptional activator RhaR | insig. | 33 | 20 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_04925 | rhaR | HTH-type transcriptional activator RhaR | insig. | 33 | 20 |
| | Dickeya dadantii 3937 | DDA3937_RS05590 | | AraC family transcriptional regulator | insig. | 33 | 20 |
| | Rahnella sp. WP5 | EX31_RS19240 | | helix-turn-helix domain-containing protein | no data | 32 | 22 |
| | Pantoea sp. MT58 | IAI47_01995 | | LacI family DNA-binding transcriptional regulator | insig. | 29 | 34 |
| | Paraburkholderia graminis OAS925 | ABIE53_002322 | | LacI family transcriptional regulator | strong | 27 | 55 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1840 | | Ribose operon repressor | strong | 26 | 58 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_04356 | | Proline utilization regulator | insig. | 30 | 30 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_03355 | | AraC family transcriptional regulator | sig. | 30 | 30 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_04412 | | Proline utilization regulator | insig. | 30 | 30 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_04870 | | AraC family transcriptional regulator | strong | 33 | 25 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14240 | | LacI family transcriptional regulator | strong | 31 | 54 |
| | Ralstonia solanacearum UW163 | UW163_RS11705 | | LacI family transcriptional regulator | insig. | 31 | 54 |
| | Rahnella sp. WP5 | EX31_RS01485 | | helix-turn-helix domain-containing protein | insig. | 37 | 23 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2062 | | Transcriptional regulator, AraC family | insig. | 27 | 41 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5905 | | Transcriptional regulator of various polyols utilization, AraC family | insig. | 25 | 41 |
| | Pantoea sp. MT58 | IAI47_00375 | | ribose operon transcriptional repressor RbsR | strong | 29 | 40 |
| | Rhizobium sp. OAE497 | ABIE40_RS15285 | | LacI family DNA-binding transcriptional regulator | sig. | 27 | 46 |
| | Paraburkholderia graminis OAS925 | ABIE53_002581 | | transcriptional regulator GlxA family with amidase domain | insig. | 26 | 26 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS06080 | | response regulator transcription factor | insig. | 31 | 27 |
| | Pantoea sp. MT58 | IAI47_00860 | | DNA-binding transcriptional regulator CytR | strong | 28 | 48 |
| | Pseudomonas segetis P6 | ACVTMO_RS05745 | | AraC family transcriptional regulator | insig. | 31 | 28 |
| | Klebsiella michiganensis M5al | BWI76_RS00695 | | AraC family transcriptional regulator | sig. | 30 | 20 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_506 | | Transcriptional regulator, AraC family | insig. | 29 | 30 |
| | Pseudomonas stutzeri RCH2 | Psest_2631 | | AraC-type DNA-binding domain-containing proteins | sig. | 26 | 34 |
| | Alteromonas macleodii MIT1002 | MIT1002_00363 | | HTH-type transcriptional repressor CytR | cofit | 26 | 55 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS11435 | | two-component regulator propeller domain-containing protein | cofit | 40 | 20 |
| | Pseudomonas segetis P6 | ACVTMO_RS07035 | | AraC family transcriptional regulator | insig. | 33 | 23 |
| | Enterobacter sp. TBS_079 | MPMX20_04614 | | Ribose operon repressor | strong | 30 | 39 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4407 | | Transcriptional regulators | cofit | 29 | 50 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_16915 | | AraC family transcriptional regulator | sig. | 30 | 24 |
| | Pseudomonas orientalis W4I3 | QF045_RS01470 | | DJ-1/PfpI family protein | insig. | 29 | 25 |
| | Paraburkholderia graminis OAS925 | ABIE53_001217 | | LacI family repressor for deo operon, udp, cdd, tsx, nupC, and nupG | insig. | 27 | 55 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_97 | | Transcriptional regulator, AraC family | insig. | 26 | 27 |
| | Dickeya dadantii 3937 | DDA3937_RS08700 | | helix-turn-helix domain-containing protein | insig. | 33 | 21 |
| | Klebsiella michiganensis M5al | BWI76_RS00765 | | DNA-binding transcriptional regulator CytR | strong | 31 | 43 |
| | Pseudomonas sp. FW215-L2 | GFF151 | | HTH-type transcriptional regulator CdhR | insig. | 30 | 21 |
| | Dickeya dianthicola ME23 | DZA65_RS16225 | | LacI family transcriptional regulator | sig. | 27 | 42 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00354 | | transcriptional regulator, AraC family with amidase-like domain | insig. | 26 | 26 |
| | Pseudomonas segetis P6 | ACVTMO_RS03440 | gbdR | choline metabolism transcriptional regulator GbdR | insig. | 35 | 22 |
| | Escherichia coli BL21 | ECD_03934 | | superoxide response regulon transcriptional activator; autoregulator | insig. | 33 | 26 |
| | Escherichia fergusonii Becca | EFB2_04529 | | Regulatory protein SoxS | insig. | 33 | 26 |
| | Escherichia coli ECOR27 | NOLOHH_05125 | soxS_A12S | regulatory protein SoxS | insig. | 33 | 26 |
| | Escherichia coli ECOR38 | HEPCGN_11490 | soxS_A12S | regulatory protein SoxS | insig. | 33 | 26 |
| | Escherichia coli ECRC100 | OKFHMN_12875 | soxS_A12S | regulatory protein SoxS | cofit | 33 | 26 |
| | Escherichia coli ECRC101 | MCAODC_03385 | soxS_A12S | regulatory protein SoxS | insig. | 33 | 26 |
| | Escherichia coli ECRC102 | NIAGMN_10720 | soxS_A12S | regulatory protein SoxS | insig. | 33 | 26 |
| | Escherichia coli ECRC62 | BNILDI_06400 | soxS_A12S | regulatory protein SoxS | insig. | 33 | 26 |
| | Escherichia coli ECRC98 | JDDGAC_16510 | soxS_A12S | regulatory protein SoxS | insig. | 33 | 26 |
| | Escherichia coli ECRC99 | KEDOAH_15275 | soxS_A12S | regulatory protein SoxS | no data | 33 | 26 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03979 | | Regulatory protein SoxS | insig. | 33 | 26 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23505 | | superoxide response transcriptional regulator SoxS | no data | 33 | 26 |
| | Escherichia coli BW25113 | b4062 | soxS | DNA-binding transcriptional dual regulator (NCBI) | strong | 33 | 26 |
| | Pseudomonas sp. FW215-L2 | GFF5535 | | HTH-type transcriptional regulator CdhR | strong | 31 | 25 |
| | Pseudomonas sp. BP01 | JOY50_RS00985 | argR | transcriptional regulator ArgR | cofit | 31 | 25 |
| | Pseudomonas putida KT2440 | PP_4482 | | Transcriptional regulator, AraC family | strong | 31 | 25 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3566 | | transcriptional regulator, AraC family | insig. | 31 | 25 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3566 | | transcriptional regulator, AraC family | insig. | 31 | 25 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5664 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 31 | 25 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_01620 | | AraC family transcriptional regulator | insig. | 31 | 27 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_10750 | | AraC family transcriptional regulator | no data | 30 | 23 |
| | Erwinia tracheiphila SCR3 | LU632_RS00855 | | helix-turn-helix domain-containing protein | insig. | 30 | 23 |
| | Escherichia fergusonii Becca | EFB2_01492 | | HTH-type transcriptional activator RhaR | insig. | 29 | 26 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2539 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 28 | 26 |
| | Rhizobium sp. OAE497 | ABIE40_RS12690 | | AraC family transcriptional regulator | insig. | 28 | 49 |
| | Dickeya dianthicola ME23 | DZA65_RS02400 | | HTH-type transcriptional activator RhaR | insig. | 35 | 20 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_25045 | | AraC family transcriptional regulator | insig. | 33 | 22 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1441 | | Regulatory protein SoxS | insig. | 33 | 26 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS23325 | | GlxA family transcriptional regulator | strong | 31 | 25 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS23325 | | GlxA family transcriptional regulator | strong | 31 | 25 |
| | Pseudomonas segetis P6 | ACVTMO_RS09310 | argR | transcriptional regulator ArgR | cofit | 31 | 25 |
| | Pseudomonas sp. DMC3 | GFF4881 | | HTH-type transcriptional regulator CdhR | cofit | 31 | 25 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04486 | | HTH-type transcriptional regulator CdhR | cofit | 31 | 25 |
| | Pseudomonas sp. RS175 | PFR28_03284 | | HTH-type transcriptional regulator CdhR | strong | 31 | 25 |
| | Pseudomonas sp. SVBP6 | COO64_RS21620 | argR | transcriptional regulator ArgR | insig. | 31 | 25 |
| | Pseudomonas orientalis W4I3 | QF045_RS23825 | | transcriptional regulator ArgR | insig. | 31 | 25 |
| | Pseudomonas simiae WCS417 | PS417_21720 | | AraC family transcriptional regulator | no data | 31 | 25 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3437 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 31 | 25 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_18720 | | AraC family transcriptional regulator | strong | 31 | 25 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS05430 | | response regulator | insig. | 31 | 19 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS02010 | | LacI family DNA-binding transcriptional regulator | cofit | 31 | 30 |
| | Dechlorosoma suillum PS | Dsui_3428 | | transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 31 | 32 |
| | Serratia liquefaciens MT49 | IAI46_11980 | | helix-turn-helix transcriptional regulator | insig. | 30 | 24 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_01620 | | AraC family transcriptional regulator | insig. | 28 | 23 |
| | Pseudomonas sp. RS175 | PFR28_03054 | | HTH-type transcriptional activator RhaS | cofit | 27 | 30 |
| | Rhizobium sp. OAE497 | ABIE40_RS21380 | | AraC family transcriptional regulator | strong | 27 | 25 |
| | Dickeya dianthicola 67-19 | HGI48_RS15405 | | LacI family DNA-binding transcriptional regulator | insig. | 27 | 42 |
| | Pantoea sp. MT58 | IAI47_10375 | | arabinose operon transcriptional regulator AraC | insig. | 27 | 27 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS10550 | araC | arabinose operon transcriptional regulator AraC | cofit | 27 | 27 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05228 | | transcriptional regulator, LacI family | sig. | 26 | 55 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0510 | | Transcriptional regulators | insig. | 25 | 46 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_19930 | | AraC family transcriptional regulator | insig. | 24 | 41 |