Homologs of PP_1099 from Pseudomonas putida KT2440

Cold shock protein CapB
SEED: Cold shock protein CspA
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Pseudomonas sp. BP01 JOY50_RS24030 cold-shock protein insig. 100 100
  Pseudomonas putida KT2440 PP_1099 Cold shock protein CapB strong 100 100
o Pseudomonas segetis P6 ACVTMO_RS07240 cold-shock protein sig. 91 99
o Pseudomonas sp. SVBP6 COO64_RS16925 cold-shock protein insig. 87 99
o Pseudomonas fluorescens SBW25 PFLU_RS06435 cold-shock protein no data 87 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06435 cold-shock protein no data 87 99
o Pseudomonas sp. DMC3 GFF2138 Cold shock protein CapB cofit 87 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01444 Cold shock protein CapB cofit 87 99
o Pseudomonas orientalis W4I3 QF045_RS09215 cold-shock protein insig. 87 99
o Pseudomonas syringae pv. syringae B728a Psyr_3884 cold-shock DNA-binding protein family no data 87 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3884 cold-shock DNA-binding protein family no data 87 99
o Pseudomonas simiae WCS417 PS417_06370 cold-shock protein strong 87 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4642 Cold shock protein CspA insig. 87 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3171 Cold shock protein CspA no data 87 99
o Pseudomonas fluorescens FW300-N2E3 AO353_16935 cold-shock protein no data 87 99
o Pseudomonas fluorescens FW300-N2C3 AO356_05540 cold-shock protein sig. 87 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2967 Cold shock protein CspA strong 87 99
o Pseudomonas stutzeri RCH2 Psest_3045 Cold shock proteins sig. 87 99
o Pseudomonas sp. RS175 PFR28_00498 Cold shock protein CapB insig. 87 99
  Pseudomonas syringae pv. syringae B728a Psyr_2160 cold-shock DNA-binding protein family insig. 84 100
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2160 cold-shock DNA-binding protein family no data 84 100
  Pseudomonas sp. DMC3 GFF5172 Major cold shock protein CspA cofit 81 97
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04611 Major cold shock protein CspA cofit 81 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_624 Cold shock protein CspA no data 81 97
  Pseudomonas fluorescens FW300-N2C3 AO356_18155 cold-shock protein strong 81 97
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS02395 cold-shock protein no data 77 100
o Rhodanobacter sp. FW510-T8 OKGIIK_15385 cspC cold-shock protein no data 77 100
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1865 Cold shock protein CspA insig. 79 97
  Pseudomonas sp. BP01 JOY50_RS11285 cold-shock protein insig. 79 97
o Rhodanobacter denitrificans MT42 LRK55_RS08385 cold-shock protein no data 78 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08620 cold-shock protein no data 78 97
  Pseudomonas stutzeri RCH2 Psest_1239 Cold shock proteins no data 76 99
  Pseudomonas fluorescens SBW25 PFLU_RS24015 cold-shock protein strong 80 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24015 cold-shock protein strong 80 96
  Pseudomonas syringae pv. syringae B728a Psyr_1094 cold-shock DNA-binding protein family sig. 79 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1094 cold-shock DNA-binding protein family insig. 79 97
  Pseudomonas simiae WCS417 PS417_22375 cold-shock protein sig. 79 97
  Pseudomonas fluorescens FW300-N2E3 AO353_03515 cold-shock protein strong 79 97
  Pseudomonas segetis P6 ACVTMO_RS17375 cold-shock protein sig. 75 99
  Pseudomonas sp. RS175 PFR28_03386 Major cold shock protein CspA sig. 80 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5555 Cold shock protein CspA sig. 80 96
  Pseudomonas sp. SVBP6 COO64_RS04435 cold-shock protein insig. 79 96
  Pseudomonas orientalis W4I3 QF045_RS24500 cold-shock protein cofit 78 97
  Pseudomonas sp. BP01 JOY50_RS04315 cold-shock protein insig. 79 97
  Pseudomonas sp. RS175 PFR28_02727 Cold shock protein CapB strong 79 97
  Pseudomonas putida KT2440 PP_2463 nucleic acid cold-shock chaperone no data 79 97
  Pseudomonas fluorescens SBW25 PFLU_RS20330 cold-shock protein insig. 78 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20330 cold-shock protein strong 78 97
  Pseudomonas sp. DMC3 GFF907 Cold shock protein CapB cofit 78 97
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03901 Cold shock protein CapB cofit 78 97
  Pseudomonas orientalis W4I3 QF045_RS20505 cold-shock protein sig. 78 97
  Pseudomonas simiae WCS417 PS417_18355 DNA-binding protein strong 78 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3902 Cold shock protein CspG no data 78 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6025 Cold shock protein CspG no data 78 97
  Pseudomonas fluorescens FW300-N2E3 AO353_20865 cold-shock protein strong 78 97
  Pseudomonas fluorescens FW300-N2C3 AO356_00920 cold-shock protein strong 78 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_171 Cold shock protein CspG no data 78 97
o Pseudomonas sp. S08-1 OH686_17410 Cold shock protein of CSP family no data 74 99
  Pseudomonas sp. SVBP6 COO64_RS10375 cold-shock protein insig. 78 97
  Pseudomonas sp. BP01 JOY50_RS28295 cold-shock protein no data 78 97
  Pseudomonas sp. S08-1 OH686_20120 Cold shock protein of CSP family no data 71 99
o Pseudomonas aeruginosa MRSN321 DY961_RS00565 cold-shock protein insig. 70 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS40470 cold-shock protein insig. 70 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2268.1 hypothetical protein no data 75 97
o Pseudomonas aeruginosa PA14 IKLFDK_16720 Major cold shock protein CspA sig. 71 99
  Pseudomonas stutzeri RCH2 Psest_3977 Cold shock proteins insig. 67 100
  Pseudomonas sp. S08-1 OH686_05655 Cold shock protein of CSP family no data 67 97
  Pseudomonas aeruginosa MRSN321 DY961_RS22270 cold-shock protein strong 68 96
  Pseudomonas aeruginosa PA14 IKLFDK_23150 cold-shock protein strong 68 96
  Pseudomonas aeruginosa PUPa3 DQ20_RS37050 cold-shock protein strong 68 96
  Lysobacter sp. OAE881 ABIE51_RS12600 cold-shock protein insig. 64 97
  Lysobacter sp. OAE881 ABIE51_RS18590 cold-shock protein no data 61 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3498.1 hypothetical protein strong 62 100
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14240 cold-shock protein no data 65 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00525 cold-shock protein no data 62 100
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00530 cold-shock protein insig. 63 97
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS13825 cold-shock protein no data 62 100
  Rhodanobacter sp. FW510-T8 OKGIIK_03595 cspC cold-shock protein no data 62 100
  Rhodanobacter denitrificans MT42 LRK55_RS14485 cold-shock protein no data 62 100
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14770 cold-shock protein no data 62 100
  Alteromonas macleodii MIT1002 MIT1002_01248 Cold shock-like protein CspG insig. 62 99
o Shewanella sp. ANA-3 Shewana3_2569 cold-shock DNA-binding protein family protein (RefSeq) no data 65 91
o Shewanella oneidensis MR-1 SO2787 cold shock domain family protein (NCBI ptt file) no data 65 91
  Rhodanobacter denitrificans MT42 LRK55_RS14490 cold-shock protein cofit 61 96
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14775 cold-shock protein strong 61 96
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS13820 cold-shock protein insig. 61 96
o Shewanella loihica PV-4 Shew_1614 cold-shock DNA-binding domain-containing protein (RefSeq) no data 65 91
  Acinetobacter radioresistens SK82 MPMX26_01112 Major cold shock protein CspA strong 60 97
  Pseudomonas sp. SVBP6 COO64_RS19570 cold-shock protein insig. 59 96
  Rhodanobacter sp. FW510-T8 OKGIIK_03600 cspC cold-shock protein sig. 61 96
  Pseudomonas stutzeri RCH2 Psest_1615 Cold shock proteins no data 59 96
o Shewanella amazonensis SB2B Sama_1970 cold-shock DNA-binding domain-containing protein (RefSeq) no data 63 91
  Vibrio cholerae E7946 ATCC 55056 CSW01_14910 cold-shock protein insig. 59 99
  Acinetobacter baumannii LAC-4 RR41_RS06300 cold-shock protein strong 60 97
  Pseudomonas putida KT2440 PP_1522 major cold shock protein sig. 58 96
  Pseudomonas sp. S08-1 OH686_06580 Cold shock protein of CSP family insig. 58 96
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00535 cold-shock protein no data 62 94
  Dechlorosoma suillum PS Dsui_2659 cold shock protein cofit 64 91
  Pseudomonas sp. SVBP6 COO64_RS27575 cold-shock protein sig. 58 96
  Burkholderia phytofirmans PsJN BPHYT_RS15720 cold-shock protein no data 65 90