Homologs of PP_0079 from Pseudomonas putida KT2440

putative transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_0079 putative transcriptional regulator insig. 100 100
o Pseudomonas sp. BP01 JOY50_RS08190 choline sulfate utilization transcriptional regulator insig. 94 100
o Pseudomonas fluorescens FW300-N2E3 AO353_10690 LysR family transcriptional regulator insig. 73 100
o Pseudomonas sp. RS175 PFR28_04651 Glycine cleavage system transcriptional activator insig. 71 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_640 Transcriptional regulator, LysR family insig. 72 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1902 Transcriptional regulator, LysR family insig. 71 100
o Pseudomonas sp. DMC3 GFF604 Glycine cleavage system transcriptional activator insig. 70 100
o Pseudomonas fluorescens FW300-N2C3 AO356_11335 LysR family transcriptional regulator insig. 70 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4134 Transcriptional regulator, LysR family insig. 69 100
o Pseudomonas syringae pv. syringae B728a Psyr_0030 transcriptional regulator, LysR family insig. 68 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0030 transcriptional regulator, LysR family insig. 68 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00235 HTH-type transcriptional regulator PerR cofit 68 100
o Pseudomonas orientalis W4I3 QF045_RS03080 LysR family transcriptional regulator insig. 68 100
o Pseudomonas fluorescens SBW25 PFLU_RS00140 LysR family transcriptional regulator insig. 68 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00140 LysR family transcriptional regulator sig. 68 100
o Pseudomonas simiae WCS417 PS417_00145 LysR family transcriptional regulator insig. 68 100
o Pseudomonas aeruginosa MRSN321 DY961_RS26360 LysR family transcriptional regulator insig. 63 99
o Pseudomonas aeruginosa PA14 IKLFDK_25400 LysR family transcriptional regulator insig. 64 96
o Pseudomonas aeruginosa PUPa3 DQ20_RS58765 LysR family transcriptional regulator insig. 64 96
o Pseudomonas segetis P6 ACVTMO_RS01410 choline sulfate utilization transcriptional regulator insig. 61 99
o Azospirillum sp. SherDot2 MPMX19_03710 Glycine cleavage system transcriptional activator insig. 41 96
o Burkholderia phytofirmans PsJN BPHYT_RS25235 LysR family transcriptional regulator insig. 41 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS08370 LysR family transcriptional regulator insig. 43 96
o Agrobacterium fabrum C58 Atu4646 LysR family transcriptional regulator insig. 37 97
o Paraburkholderia graminis OAS925 ABIE53_006127 putative choline sulfate-utilization transcription factor insig. 42 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02479 transcriptional regulator, LysR family insig. 41 95
o Dickeya dianthicola ME23 DZA65_RS20125 LysR family transcriptional regulator insig. 37 96
o Rhizobium sp. OAE497 ABIE40_RS01460 LysR substrate-binding domain-containing protein insig. 37 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS11025 LysR substrate-binding domain-containing protein insig. 39 96
  Pseudomonas fluorescens FW300-N2C3 AO356_00620 LysR family transcriptional regulator insig. 35 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS36335 LysR substrate-binding domain-containing protein insig. 35 95
  Pseudomonas segetis P6 ACVTMO_RS12075 LysR substrate-binding domain-containing protein insig. 34 95
  Cupriavidus basilensis FW507-4G11 RR42_RS05805 LysR family transcriptional regulator insig. 35 95
  Cupriavidus basilensis FW507-4G11 RR42_RS17760 LysR family transcriptional regulator insig. 34 97
o Sinorhizobium meliloti 1021 SMc00929 transcriptional regulator insig. 36 96
  Erwinia amylovora T8 OLJFJH_09170 Glycine cleavage system transcriptional activator cofit 36 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1560 Glycine cleavage system transcriptional activator GcvA insig. 34 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04918 transcriptional regulator, LysR family insig. 35 95
  Rhodospirillum rubrum S1H Rru_A2214 Transcriptional Regulator, LysR family (NCBI) cofit 39 95
  Pseudomonas fluorescens FW300-N2C3 AO356_00040 LysR family transcriptional regulator insig. 35 96
  Pseudomonas fluorescens SBW25 PFLU_RS22805 LysR family transcriptional regulator insig. 38 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22805 LysR family transcriptional regulator insig. 38 89
  Enterobacter sp. TBS_079 MPMX20_03671 Glycine cleavage system transcriptional activator strong 37 96
  Pseudomonas aeruginosa PA14 IKLFDK_23190 LysR family transcriptional regulator strong 35 96
  Pseudomonas aeruginosa PUPa3 DQ20_RS37090 LysR family transcriptional regulator strong 35 96
  Enterobacter asburiae PDN3 EX28DRAFT_2883 Transcriptional regulator insig. 36 96
  Pantoea sp. MT58 IAI47_04025 transcriptional regulator GcvA strong 35 96
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16945 transcriptional regulator GcvA cofit 35 96
  Pseudomonas aeruginosa MRSN321 DY961_RS22230 LysR family transcriptional regulator strong 35 96
  Azospirillum sp. SherDot2 MPMX19_01055 Glycine cleavage system transcriptional activator insig. 36 96
  Klebsiella michiganensis M5al BWI76_RS22955 transcriptional regulator GcvA strong 36 96
  Herbaspirillum seropedicae SmR1 HSERO_RS01160 LysR family transcriptional regulator insig. 36 96
  Vibrio cholerae E7946 ATCC 55056 CSW01_18515 DNA-binding transcriptional regulator DsdC insig. 30 98
  Cupriavidus basilensis FW507-4G11 RR42_RS02900 LysR family transcriptional regulator sig. 36 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02051 LysR family transcriptional regulator, glycine cleavage system transcriptional activator insig. 36 96
  Pseudomonas putida KT2440 PP_5375 Transcriptional regulator, LysR family insig. 34 95
  Shewanella amazonensis SB2B Sama_2429 DNA-binding transcriptional activator GcvA (RefSeq) strong 37 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS39605 LysR substrate-binding domain-containing protein insig. 36 97
  Serratia liquefaciens MT49 IAI46_20340 transcriptional regulator GcvA cofit 34 96
  Pectobacterium carotovorum WPP14 HER17_RS16415 transcriptional regulator GcvA cofit 35 96
  Caulobacter crescentus NA1000 CCNA_01174 LysR-family transcriptional regulator strong 37 95
  Caulobacter crescentus NA1000 Δfur CCNA_01174 LysR-family transcriptional regulator insig. 37 95
  Agrobacterium fabrum C58 Atu2078 transcriptional regulator, LysR family insig. 34 95
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_17275 gcvA Glycine cleavage system transcriptional activator cofit 35 96
  Erwinia tracheiphila SCR3 LU632_RS06255 transcriptional regulator GcvA sig. 35 96
  Escherichia coli BL21 ECD_02659 glycine cleavage system transcriptional activator; autorepressor strong 35 96
  Escherichia fergusonii Becca EFB2_01109 Glycine cleavage system transcriptional activator insig. 35 96
  Escherichia coli ECOR27 NOLOHH_12000 gcvA glycine cleavage system transcriptional regulator GcvA strong 35 96
  Escherichia coli ECOR38 HEPCGN_19375 gcvA glycine cleavage system transcriptional regulator GcvA strong 35 96
  Escherichia coli ECRC100 OKFHMN_20120 gcvA glycine cleavage system transcriptional regulator GcvA cofit 35 96
  Escherichia coli ECRC101 MCAODC_10645 gcvA glycine cleavage system transcriptional regulator GcvA sig. 35 96
  Escherichia coli ECRC102 NIAGMN_17890 gcvA glycine cleavage system transcriptional regulator GcvA sig. 35 96
  Escherichia coli ECRC62 BNILDI_10505 gcvA glycine cleavage system transcriptional regulator GcvA cofit 35 96
  Escherichia coli ECRC98 JDDGAC_23785 gcvA glycine cleavage system transcriptional regulator GcvA insig. 35 96
  Escherichia coli ECRC99 KEDOAH_08010 gcvA glycine cleavage system transcriptional regulator GcvA no data 35 96
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00923 Glycine cleavage system transcriptional activator insig. 35 96
  Escherichia coli Nissle 1917 ECOLIN_RS15650 glycine cleavage system transcriptional regulator GcvA strong 35 96
  Escherichia coli BW25113 b2808 gcvA DNA-binding transcriptional dual regulator (NCBI) strong 35 96
  Burkholderia phytofirmans PsJN BPHYT_RS09895 LysR family transcriptional regulator insig. 33 96
  Sphingobium sp. HT1-2 GFF3427 Transcriptional regulator, LysR family cofit 37 95
  Azospirillum sp. SherDot2 MPMX19_03250 Glycine cleavage system transcriptional activator insig. 36 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4865 Glycine cleavage system transcriptional activator GcvA sig. 35 96
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03271 Glycine cleavage system transcriptional activator cofit 39 84
  Rhodospirillum rubrum S1H Rru_A2215 Transcriptional Regulator, LysR family (NCBI) cofit 38 95
  Burkholderia phytofirmans PsJN BPHYT_RS11810 LysR family transcriptional regulator insig. 35 95
  Marinobacter adhaerens HP15 HP15_1669 transcriptional regulator, LysR family protein insig. 34 96
  Azospirillum sp. SherDot2 MPMX19_06950 Glycine cleavage system transcriptional activator insig. 34 96
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02882 Glycine cleavage system transcriptional activator cofit 38 94
  Paraburkholderia graminis OAS925 ABIE53_000629 LysR family glycine cleavage system transcriptional activator insig. 35 95
  Pseudomonas putida KT2440 PP_0157 transcriptional activator of gcdH, LysR family strong 35 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_04590 transcriptional regulator GcvA insig. 34 97
  Pseudomonas fluorescens SBW25 PFLU_RS16755 LysR family transcriptional regulator insig. 36 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16755 LysR family transcriptional regulator insig. 36 96
  Pseudomonas sp. SVBP6 COO64_RS21105 LysR substrate-binding domain-containing protein insig. 35 95
  Pseudomonas sp. S08-1 OH686_11695 Transcriptional regulator, LysR family strong 35 96
  Dickeya dadantii 3937 DDA3937_RS05050 transcriptional regulator GcvA cofit 35 96
  Dickeya dianthicola ME23 DZA65_RS05390 transcriptional regulator GcvA insig. 34 96
  Kangiella aquimarina DSM 16071 B158DRAFT_0909 Transcriptional regulator strong 34 95
  Shewanella loihica PV-4 Shew_2764 DNA-binding transcriptional activator GcvA (RefSeq) no data 36 97
  Alteromonas macleodii MIT1002 MIT1002_01520 Gcv operon activator insig. 35 95