Homologs of PFLU_RS15385 from Pseudomonas fluorescens SBW25

helicase UvrD
SEED: UvrD/REP helicase family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens SBW25 PFLU_RS15385 helicase UvrD insig. 100 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS15385 helicase UvrD insig. 100 100
o Pseudomonas simiae WCS417 PS417_13405 helicase UvrD insig. 93 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3068 UvrD/REP helicase family protein insig. 83 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4888 UvrD/REP helicase family protein insig. 83 98
o Pseudomonas fluorescens FW300-N2E3 AO353_24675 DNA helicase UvrD insig. 81 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1062 UvrD/REP helicase family protein insig. 80 100
o Pseudomonas sp. RS175 PFR28_02128 ATP-dependent DNA helicase Rep insig. 79 100
o Pseudomonas fluorescens FW300-N2C3 AO356_27055 DNA helicase UvrD insig. 80 98
o Pseudomonas syringae pv. syringae B728a Psyr_2511 UvrD/REP helicase insig. 71 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2511 UvrD/REP helicase insig. 71 97
o Pseudomonas putida KT2440 PP_2565 putative helicase, UvrD/REP family insig. 68 100
  Pseudomonas fluorescens FW300-N2E3 AO353_24575 hypothetical protein insig. 43 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5494 Helicase IV (EC 3.6.1.-) insig. 34 99
o Burkholderia phytofirmans PsJN BPHYT_RS32035 hypothetical protein insig. 34 94
  Pseudomonas sp. S08-1 OH686_03735 hypothetical protein insig. 36 44
  Pseudomonas stutzeri RCH2 Psest_2410 Superfamily I DNA and RNA helicases insig. 34 45
  Pseudomonas stutzeri RCH2 Psest_2410 Superfamily I DNA and RNA helicases insig. 36 19
  Pseudomonas sp. S08-1 OH686_03735 hypothetical protein insig. 33 19
  Erwinia tracheiphila SCR3 LU632_RS10050 helD DNA helicase IV sig. 30 33
  Pantoea sp. MT58 IAI47_12620 DNA helicase IV insig. 28 32
  Klebsiella michiganensis M5al BWI76_RS09995 DNA helicase IV sig. 29 31
  Dickeya dadantii 3937 DDA3937_RS15220 DNA helicase IV insig. 29 32
  Pectobacterium carotovorum WPP14 HER17_RS08445 DNA helicase IV cofit 28 32
  Dickeya dianthicola 67-19 HGI48_RS15295 DNA helicase IV insig. 28 32
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3253 DNA helicase IV insig. 28 32
  Shewanella oneidensis MR-1 SO0467 uvrD DNA helicase II (NCBI ptt file) strong 31 20
  Escherichia coli BL21 ECD_00966 DNA helicase IV insig. 27 33
  Escherichia coli ECRC101 OKFHMN_05210 helD DNA helicase IV insig. 27 33
  Escherichia coli ECRC101 MCAODC_24600 helD DNA helicase IV insig. 27 33
  Escherichia coli ECRC102 NIAGMN_02930 helD DNA helicase IV no data 27 33
  Escherichia coli ECRC98 JDDGAC_08820 helD DNA helicase IV no data 27 33
  Escherichia coli ECRC99 KEDOAH_22525 helD DNA helicase IV no data 27 33
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02704 DNA helicase IV cofit 27 33
  Escherichia coli BW25113 b0962 helD DNA helicase IV (NCBI) sig. 27 33
  Escherichia coli ECOR27 NOLOHH_21765 helD DNA helicase IV insig. 27 33
  Escherichia coli ECRC62 BNILDI_19930 helD DNA helicase IV insig. 27 33
  Shewanella sp. ANA-3 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) strong 29 20
  Escherichia fergusonii Becca EFB2_03109 DNA helicase IV insig. 27 33
  Pseudomonas stutzeri RCH2 Psest_4098 Superfamily I DNA and RNA helicases strong 30 20
  Caulobacter crescentus NA1000 CCNA_01596 DNA helicase II strong 31 17
  Caulobacter crescentus NA1000 Δfur CCNA_01596 DNA helicase II cofit 31 17
  Serratia liquefaciens MT49 IAI46_08900 DNA helicase IV insig. 28 34
  Escherichia coli ECOR38 HEPCGN_23310 helD DNA helicase IV cofit 27 33
  Escherichia coli Nissle 1917 ECOLIN_RS05055 DNA helicase IV insig. 27 33
  Phaeobacter inhibens DSM 17395 PGA1_c09450 DNA helicase II UvrD strong 33 17
  Vibrio cholerae E7946 ATCC 55056 CSW01_01015 DNA helicase II strong 30 19
  Dickeya dianthicola ME23 DZA65_RS16120 DNA helicase IV insig. 28 32
  Rahnella sp. WP5 EX31_RS18015 DNA helicase IV insig. 26 34
  Ralstonia solanacearum GMI1000 RS_RS11220 DNA-dependent helicase insig. 28 21
  Enterobacter sp. TBS_079 MPMX20_01612 DNA helicase IV insig. 28 33
  Bacteroides thetaiotaomicron VPI-5482 BT2999 helicase IV (NCBI ptt file) insig. 22 79
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03775 DNA-dependent helicase no data 30 21
  Ralstonia solanacearum UW163 UW163_RS09895 DNA-dependent helicase no data 30 21
  Agrobacterium fabrum C58 Atu2057 DNA helicase II sig. 36 12
  Rhizobium sp. OAE497 ABIE40_RS11670 UvrD-helicase domain-containing protein sig. 32 18
  Herbaspirillum seropedicae SmR1 HSERO_RS02160 DNA-dependent helicase sig. 29 20
  Ralstonia sp. UNC404CL21Col ABZR87_RS15705 UvrD-helicase domain-containing protein sig. 37 13
  Ralstonia solanacearum PSI07 RPSI07_RS13455 DNA-dependent helicase no data 30 21
  Phocaeicola dorei CL03T12C01 ABI39_RS19005 UvrD-helicase domain-containing protein insig. 29 30
  Pseudomonas fluorescens SBW25 PFLU_RS29900 DNA helicase II cofit 28 20
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29900 DNA helicase II strong 28 20
  Enterobacter asburiae PDN3 EX28DRAFT_1981 Superfamily I DNA and RNA helicases insig. 28 35
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0249 Superfamily I DNA and RNA helicases strong 35 12
  Acidovorax sp. GW101-3H11 Ac3H11_1660 ATP-dependent DNA helicase UvrD/PcrA insig. 32 18
  Shewanella loihica PV-4 Shew_3385 uvrD DNA-dependent helicase II (RefSeq) strong 32 14
  Paraburkholderia graminis OAS925 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA no data 28 23
  Shewanella amazonensis SB2B Sama_0419 uvrD DNA-dependent helicase II (RefSeq) strong 33 13
  Pseudomonas fluorescens GW456-L13 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA sig. 28 20
  Dinoroseobacter shibae DFL-12 Dshi_2483 UvrD/REP helicase (RefSeq) no data 28 22
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04960 UvrD-helicase domain-containing protein insig. 32 15
  Paraburkholderia sabiae LMG 24235 QEN71_RS05110 3'-5' exonuclease no data 28 23
  Burkholderia phytofirmans PsJN BPHYT_RS13840 DNA-dependent helicase no data 29 23
  Rhodopseudomonas palustris CGA009 TX73_018165 UvrD-helicase domain-containing protein sig. 26 20
  Sinorhizobium meliloti 1021 SMc01461 DNA helicase II protein strong 30 12
  Pantoea sp. MT58 IAI47_18545 DNA helicase Rep no data 29 20
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA insig. 28 20
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04469 ATP-dependent DNA helicase UvrD no data 27 23
  Pseudomonas putida KT2440 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex strong 35 14
  Alteromonas macleodii MIT1002 MIT1002_00153 DNA helicase II sig. 33 15
  Pseudomonas fluorescens FW300-N2C3 AO356_11990 DNA helicase II strong 28 20
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA strong 28 20
  Klebsiella michiganensis M5al BWI76_RS01220 DNA-dependent helicase II strong 26 22
  Rahnella sp. WP5 EX31_RS15175 DNA helicase II insig. 32 14
  Cupriavidus basilensis FW507-4G11 RR42_RS15090 DNA helicase strong 36 12
  Magnetospirillum magneticum AMB-1 AMB_RS07175 ATP-dependent helicase insig. 36 13
  Bosea sp. OAE506 ABIE41_RS12730 UvrD-helicase domain-containing protein insig. 34 12
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16790 UvrD-helicase domain-containing protein no data 30 19
  Rhodanobacter sp. FW510-T8 OKGIIK_13085 rep ATP-dependent DNA helicase Rep no data 30 19
  Variovorax sp. SCN45 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) cofit 28 23
  Escherichia coli BL21 ECD_03689 DNA-dependent ATPase I and helicase II no data 27 22
  Escherichia fergusonii Becca EFB2_04824 DNA helicase II strong 27 22
  Escherichia coli ECOR27 NOLOHH_06540 uvrD DNA helicase II cofit 27 22
  Escherichia coli ECOR38 HEPCGN_13115 uvrD DNA helicase II cofit 27 22
  Escherichia coli ECRC101 OKFHMN_14410 uvrD DNA helicase II sig. 27 22
  Escherichia coli ECRC101 MCAODC_04915 uvrD DNA helicase II sig. 27 22
  Escherichia coli ECRC102 NIAGMN_12165 uvrD DNA helicase II strong 27 22
  Escherichia coli ECRC62 BNILDI_04995 uvrD DNA helicase II insig. 27 22
  Escherichia coli ECRC98 JDDGAC_18035 uvrD DNA helicase II no data 27 22
  Escherichia coli ECRC99 KEDOAH_13740 uvrD DNA helicase II no data 27 22