| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Azospirillum sp. SherDot2 | MPMX19_01171 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 100 | 100 |
| | Azospirillum sp. SherDot2 | MPMX19_04156 | | hypothetical protein | insig. | 34 | 47 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1408 | mapA | membrane-associated protein | insig. | 25 | 63 |
| | Methylophilus sp. DMC18 | GFF1234 | | Ubiquinone biosynthesis O-methyltransferase | no data | 30 | 50 |
| | Mycobacterium tuberculosis H37Rv | Rv1498c | | Probable methyltransferase | insig. | 30 | 45 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS11800 | | 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase | strong | 26 | 51 |
| | Agrobacterium fabrum C58 | Atu1625 | | methyltransferase | insig. | 33 | 52 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05895 | | Methylase involved in ubiquinone/menaquinone biosynthesis | no data | 31 | 53 |
| | Sinorhizobium meliloti 1021 | SM_b21312 | | methyltransferase | insig. | 30 | 43 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS08070 | | bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | no data | 27 | 63 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS08070 | | bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | no data | 27 | 63 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01756 | | Ubiquinone biosynthesis O-methyltransferase | no data | 27 | 63 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS04905 | | class I SAM-dependent methyltransferase | insig. | 32 | 44 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05125 | | class I SAM-dependent methyltransferase | insig. | 32 | 44 |
| | Sphingobium sp. HT1-2 | GFF450 | | SAM-dependent methyltransferase | cofit | 33 | 48 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_09520 | ubiG | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 32 | 46 |
| | Rhodopseudomonas palustris CGA009 | TX73_008295 | | class I SAM-dependent methyltransferase | insig. | 31 | 49 |
| | Pseudomonas simiae WCS417 | PS417_08100 | | 3-demethylubiquinone-9 3-methyltransferase | no data | 27 | 63 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_02095 | | 3-demethylubiquinone-9 3-methyltransferase | no data | 26 | 63 |
| | Pseudomonas sp. DMC3 | GFF4682 | | Ubiquinone biosynthesis O-methyltransferase | no data | 31 | 45 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0596 | | delta(24)-sterol C-methyltransferase | strong | 29 | 63 |
| | Variovorax sp. SCN45 | GFF1360 | | 3-demethylubiquinol 3-O-methyltransferase (EC 2.1.1.64) @ 2-polyprenyl-6-hydroxyphenyl methylase (EC 2.1.1.222) | insig. | 33 | 50 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2171 | | 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) | no data | 27 | 63 |
| | Shewanella oneidensis MR-1 | SO4199 | ubiE | ubiquinone/menaquinone biosynthesis methlytransferase UbiE (NCBI ptt file) | no data | 26 | 64 |
| | Shewanella amazonensis SB2B | Sama_3202 | | ubiquinone/menaquinone biosynthesis methlytransferase UbiE (RefSeq) | no data | 27 | 64 |
| | Shewanella sp. ANA-3 | Shewana3_3725 | | demethylmenaquinone methyltransferase (RefSeq) | no data | 26 | 64 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS08780 | | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 30 | 46 |
| | Paraburkholderia graminis OAS925 | ABIE53_001147 | | ubiquinone/menaquinone biosynthesis C-methylase UbiE/glycosyltransferase involved in cell wall biosynthesis/regulator of replication initiation timing | strong | 29 | 45 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS18760 | | glycosyltransferase | strong | 29 | 46 |
| | Mycobacterium tuberculosis H37Rv | Rv0224c | | Possible methyltransferase (methylase) | no data | 29 | 70 |
| | Pseudomonas sp. RS175 | PFR28_00315 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 32 | 49 |
| | Pseudomonas segetis P6 | MPMX49_02904 | | Ubiquinone biosynthesis O-methyltransferase | no data | 31 | 48 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2525 | | 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) | no data | 31 | 45 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_356 | | 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) | no data | 26 | 63 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS04705 | | class I SAM-dependent methyltransferase | insig. | 34 | 43 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2034 | | Methyltransferase | insig. | 32 | 48 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_19575 | bioC | malonyl-ACP O-methyltransferase BioC | no data | 31 | 50 |
| | Erwinia tracheiphila SCR3 | LU632_RS09140 | bioC | malonyl-ACP O-methyltransferase BioC | no data | 31 | 50 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4022 | | Methyltransferase type 11 | no data | 27 | 57 |
| | Pseudomonas stutzeri RCH2 | Psest_3940 | | ubiquinone/menaquinone biosynthesis methyltransferases | no data | 27 | 64 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3167.1 | | biotin synthesis protein | insig. | 35 | 43 |
| | Azospirillum brasilense Sp245 | AZOBR_RS03915 | | trans-aconitate 2-methyltransferase | insig. | 33 | 47 |
| | Serratia liquefaciens MT49 | IAI46_00185 | | class I SAM-dependent methyltransferase | insig. | 32 | 44 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05655 | | malonyl-[acyl-carrier protein] O-methyltransferase BioC | insig. | 29 | 65 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_22385 | rlmA | 23S rRNA (guanine(745)-N(1))-methyltransferase | cofit | 34 | 28 |
| | Erwinia tracheiphila SCR3 | LU632_RS13200 | rlmA | 23S rRNA (guanine(745)-N(1))-methyltransferase | insig. | 34 | 28 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_16925 | | SAM-dependent methyltransferase | sig. | 24 | 47 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS02465 | | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 32 | 45 |
| | Pseudomonas sp. S08-1 | OH686_20845 | | 3-demethylubiquinone-9 3-O-methyltransferase | no data | 30 | 48 |
| | Paraburkholderia graminis OAS925 | ABIE53_001057 | | ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 28 | 55 |
| | Variovorax sp. OAS795 | ABID97_RS02595 | | methionine biosynthesis protein MetW | no data | 28 | 54 |
| | Paraburkholderia graminis OAS925 | ABIE53_000771 | | demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 26 | 61 |
| | Serratia liquefaciens MT49 | IAI46_06535 | | malonyl-ACP O-methyltransferase BioC | insig. | 34 | 45 |
| | Pseudomonas sp. RS175 | PFR28_00901 | | Ubiquinone biosynthesis O-methyltransferase | no data | 31 | 48 |
| | Rhizobium sp. OAE497 | ABIE40_RS22210 | | trans-aconitate 2-methyltransferase | insig. | 34 | 52 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS00510 | | class I SAM-dependent methyltransferase | insig. | 31 | 44 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_17035 | | malonyl-ACP O-methyltransferase BioC | sig. | 30 | 64 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS18325 | | class I SAM-dependent methyltransferase | cofit | 30 | 43 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_03490 | | 3-demethylubiquinone-9 3-methyltransferase | no data | 30 | 45 |
| | Paraburkholderia graminis OAS925 | ABIE53_006338 | | ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 30 | 53 |
| | Acinetobacter baumannii LAC-4 | RR41_RS16615 | | methionine biosynthesis protein MetW | sig. | 33 | 53 |
| | Pseudomonas sp. SVBP6 | COO64_RS06770 | ubiG | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 30 | 45 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS03975 | | class I SAM-dependent methyltransferase | insig. | 25 | 70 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_14715 | | Biotin synthase | insig. | 32 | 44 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04185 | | class I SAM-dependent methyltransferase | insig. | 29 | 46 |
| | Ralstonia solanacearum UW163 | UW163_RS09485 | | class I SAM-dependent methyltransferase | insig. | 29 | 46 |
| | Xanthobacter sp. DMC5 | GFF169 | | Ubiquinone biosynthesis O-methyltransferase, mitochondrial | insig. | 28 | 51 |
| | Rhodospirillum rubrum S1H | Rru_A0648 | | hypothetical protein (NCBI) | insig. | 33 | 51 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS07480 | | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 31 | 45 |
| | Dechlorosoma suillum PS | Dsui_1934 | | ubiquinone biosynthesis O-methyltransferase | no data | 30 | 47 |
| | Variovorax sp. SCN45 | GFF3264 | | Methionine biosynthesis protein MetW | strong | 30 | 54 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS00360 | | class I SAM-dependent methyltransferase | no data | 29 | 44 |
| | Pseudomonas sp. BP01 | JOY50_RS16160 | ubiG | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 30 | 45 |
| | Pseudomonas putida KT2440 | PP_1765 | | Ubiquinone biosynthesis O-methyltransferase | no data | 30 | 45 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS29785 | | methyltransferase domain-containing protein | no data | 27 | 60 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS02400 | | ubiquinone biosynthesis methyltransferase UbiE | no data | 27 | 50 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_12755 | | SAM-dependent methyltransferase | insig. | 25 | 42 |
| | Pseudomonas sp. RS175 | PFR28_04550 | | Ubiquinone biosynthesis O-methyltransferase, mitochondrial | insig. | 25 | 51 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS20800 | | class I SAM-dependent methyltransferase | insig. | 33 | 41 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_16115 | | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 30 | 48 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3650 | | 3-demethylubiquinone-9 3-methyltransferase | no data | 30 | 48 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3650 | | 3-demethylubiquinone-9 3-methyltransferase | no data | 30 | 48 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS13165 | | class I SAM-dependent methyltransferase | insig. | 28 | 45 |
| | Shewanella loihica PV-4 | Shew_3373 | | ubiquinone/menaquinone biosynthesis methyltransferase (RefSeq) | no data | 26 | 52 |
| | Variovorax sp. SCN45 | GFF6188 | | 3-demethylubiquinol 3-O-methyltransferase (EC 2.1.1.64) @ 2-polyprenyl-6-hydroxyphenyl methylase (EC 2.1.1.222) | no data | 29 | 43 |
| | Agrobacterium fabrum C58 | Atu3676 | | siderophore biosynthesis protein | insig. | 28 | 43 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_2570 | | 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) | no data | 31 | 46 |
| | Caulobacter crescentus NA1000 | CCNA_01978 | | methyltransferase | sig. | 31 | 48 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_01978 | | methyltransferase | cofit | 31 | 48 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22920 | | malonyl-ACP O-methyltransferase BioC | cofit | 31 | 43 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5339 | | 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) | no data | 31 | 47 |
| | Bosea sp. OAE506 | ABIE41_RS02030 | | class I SAM-dependent methyltransferase | insig. | 30 | 42 |
| | Variovorax sp. SCN45 | GFF3185 | | SAM-dependent methyltransferase | insig. | 28 | 55 |
| | Pseudomonas segetis P6 | MPMX49_04258 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 27 | 51 |
| | Pectobacterium carotovorum WPP14 | HER17_RS08815 | | class I SAM-dependent methyltransferase | insig. | 23 | 47 |
| | Paraburkholderia graminis OAS925 | ABIE53_001949 | | SAM-dependent methyltransferase | strong | 28 | 48 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2214 | | malonyl-acyl carrier protein O-methyltransferase BioC | insig. | 28 | 67 |
| | Pseudomonas segetis P6 | MPMX49_00385 | | Ubiquinone biosynthesis O-methyltransferase, mitochondrial | strong | 24 | 74 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS12045 | | trans-aconitate 2-methyltransferase | insig. | 46 | 22 |
| | Pseudomonas segetis P6 | MPMX49_00386 | | Ubiquinone biosynthesis O-methyltransferase, mitochondrial | strong | 23 | 54 |