Homologs of MMP_RS00880 from Methanococcus maripaludis S2

ribosome assembly RNA-binding protein YhbY
SEED: FIG004454: RNA binding protein
KEGG: RNA-binding protein

76 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Methanococcus maripaludis JJ MMJJ_RS04610 ribosome assembly RNA-binding protein YhbY sig. 100 100
  Methanococcus maripaludis S2 MMP_RS00880 ribosome assembly RNA-binding protein YhbY sig. 100 100
  Kangiella aquimarina DSM 16071 B158DRAFT_0633 putative RNA-binding protein, YhbY family sig. 36 73
  Pectobacterium carotovorum WPP14 HER17_RS18325 ribosome assembly RNA-binding protein YhbY no data 35 69
  Klebsiella pneumoniae MKP103 KDGMDA_05970 ribosome assembly RNA-binding protein YhbY insig. 33 69
  Rahnella sp. WP5 EX31_RS08590 ribosome assembly RNA-binding protein YhbY insig. 31 69
  Enterobacter asburiae PDN3 EX28DRAFT_3231 putative RNA-binding protein, YhbY family cofit 33 69
  Enterobacter sp. TBS_079 MPMX20_04084 RNA-binding protein YhbY insig. 33 69
  Burkholderia phytofirmans PsJN BPHYT_RS14175 RNA-binding protein cofit 34 78
  Serratia liquefaciens MT49 IAI46_01885 ribosome assembly RNA-binding protein YhbY cofit 30 69
  Paraburkholderia sabiae LMG 24235 QEN71_RS04795 YhbY family RNA-binding protein strong 37 69
  Paraburkholderia graminis OAS925 ABIE53_003001 RNA-binding protein insig. 36 69
  Escherichia fergusonii Becca EFB2_00643 RNA-binding protein YhbY insig. 31 69
  Klebsiella michiganensis M5al BWI76_RS25155 RNA-binding protein no data 31 69
  Escherichia coli BL21 ECD_03045 RNA binding protein sig. 31 69
  Escherichia coli ECOR27 NOLOHH_09850 yhbY ribosome assembly RNA-binding protein YhbY insig. 31 69
  Escherichia coli ECOR38 HEPCGN_16925 yhbY ribosome assembly RNA-binding protein YhbY insig. 31 69
  Escherichia coli ECRC100 OKFHMN_18050 yhbY ribosome assembly RNA-binding protein YhbY cofit 31 69
  Escherichia coli ECRC101 MCAODC_08570 yhbY ribosome assembly RNA-binding protein YhbY sig. 31 69
  Escherichia coli ECRC102 NIAGMN_15810 yhbY ribosome assembly RNA-binding protein YhbY insig. 31 69
  Escherichia coli ECRC62 BNILDI_01685 yhbY ribosome assembly RNA-binding protein YhbY cofit 31 69
  Escherichia coli ECRC98 JDDGAC_21675 yhbY ribosome assembly RNA-binding protein YhbY insig. 31 69
  Escherichia coli ECRC99 KEDOAH_10100 yhbY ribosome assembly RNA-binding protein YhbY no data 31 69
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00520 RNA-binding protein YhbY sig. 31 69
  Escherichia coli Nissle 1917 ECOLIN_RS18315 ribosome assembly RNA-binding protein YhbY cofit 31 69
  Escherichia coli BW25113 b3180 yhbY predicted RNA-binding protein (NCBI) strong 31 69
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2921 FIG004454: RNA binding protein insig. 30 69
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04406 putative RNA-binding protein, YhbY family sig. 36 69
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09170 ribosome assembly RNA-binding protein YhbY insig. 31 69
  Pantoea sp. MT58 IAI47_17075 ribosome assembly RNA-binding protein YhbY insig. 31 69
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_13870 yhbY ribosome assembly RNA-binding protein YhbY insig. 31 76
  Alteromonas macleodii MIT1002 MIT1002_01863 RNA-binding protein insig. 32 73
  Shewanella loihica PV-4 Shew_2836 hypothetical protein (RefSeq) no data 31 70
  Dickeya dadantii 3937 DDA3937_RS03020 ribosome assembly RNA-binding protein YhbY insig. 30 69
  Dickeya dianthicola 67-19 HGI48_RS03190 ribosome assembly RNA-binding protein YhbY insig. 30 69
  Dickeya dianthicola ME23 DZA65_RS03185 ribosome assembly RNA-binding protein YhbY insig. 30 69
  Castellaniella sp019104865 MT123 ABCV34_RS15545 ribosome assembly RNA-binding protein YhbY insig. 27 69
  Erwinia tracheiphila SCR3 LU632_RS21115 yhbY ribosome assembly RNA-binding protein YhbY insig. 31 72
  Erwinia amylovora T8 OLJFJH_07190 ribosome assembly RNA-binding protein YhbY insig. 31 69
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS06570 ribosome assembly RNA-binding protein YhbY sig. 27 78
  Vibrio cholerae E7946 ATCC 55056 CSW01_03335 ribosome assembly RNA-binding protein YhbY insig. 33 69
  Rhodanobacter denitrificans MT42 LRK55_RS16400 ribosome assembly RNA-binding protein YhbY insig. 31 69
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16675 ribosome assembly RNA-binding protein YhbY insig. 31 69
  Acinetobacter radioresistens SK82 MPMX26_00770 RNA-binding protein insig. 30 67
  Acinetobacter baumannii LAC-4 RR41_RS04175 ribosome assembly RNA-binding protein YhbY insig. 33 67
  Lysobacter sp. OAE881 ABIE51_RS06515 ribosome assembly RNA-binding protein YhbY insig. 26 68
  Cupriavidus basilensis FW507-4G11 RR42_RS13495 RNA-binding protein no data 33 61
  Rhodanobacter sp. FW510-T8 OKGIIK_08090 yhbY ribosome assembly RNA-binding protein YhbY no data 31 69
  Shewanella amazonensis SB2B Sama_0952 RNA-binding protein (RefSeq) insig. 30 71
  Marinobacter adhaerens HP15 HP15_3075 RNA-binding, CRM domain, prokaryote insig. 30 69
  Ralstonia solanacearum GMI1000 RS_RS07645 RNA-binding protein insig. 33 61
  Herbaspirillum seropedicae SmR1 HSERO_RS06935 RNA-binding protein insig. 31 62
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02175 RNA-binding protein no data 30 70
  Ralstonia solanacearum UW163 UW163_RS15485 RNA-binding protein insig. 30 70
  Pseudomonas sp. S08-1 OH686_17095 RNA-binding protein YhbY insig. 25 69
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4215 FIG004454: RNA binding protein no data 24 71
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12245 ribosome assembly RNA-binding protein YhbY sig. 31 69
  Pseudomonas segetis P6 ACVTMO_RS05900 yhbY ribosome assembly RNA-binding protein YhbY insig. 27 69
  Variovorax sp. OAS795 ABID97_RS17055 YhbY family RNA-binding protein cofit 23 70
  Ralstonia solanacearum PSI07 RPSI07_RS15270 RNA-binding protein insig. 32 61
  Ralstonia sp. UNC404CL21Col ABZR87_RS14125 YhbY family RNA-binding protein sig. 32 61
  Shewanella sp. ANA-3 Shewana3_1021 hypothetical protein (RefSeq) cofit 27 69
  Shewanella oneidensis MR-1 SO1195 conserved hypothetical protein TIGR00253 (NCBI ptt file) no data 27 69
  Pseudomonas putida KT2440 PP_4720 putative RNA binding protein strong 28 69
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3126.1 FIG004454: RNA binding protein no data 27 69
  Pseudomonas fluorescens FW300-N2E3 AO353_05615 RNA-binding protein no data 28 76
  Pseudomonas syringae pv. syringae B728a Psyr_4189 Protein of unknown function UPF0044 no data 26 69
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4189 Protein of unknown function UPF0044 insig. 26 69
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3361 FIG004454: RNA binding protein no data 27 76
  Pseudomonas sp. SVBP6 COO64_RS15225 yhbY ribosome assembly RNA-binding protein YhbY insig. 27 69
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1169 FIG004454: RNA binding protein no data 27 76
  Pseudomonas fluorescens FW300-N2C3 AO356_07465 RNA-binding protein no data 27 76
  Pseudomonas sp. RS175 PFR28_00080 RNA-binding protein YhbY no data 27 76
  Pseudomonas sp. DMC3 GFF4980 RNA-binding protein cofit 29 78
  Pseudomonas sp. BP01 JOY50_RS26780 YhbY family RNA-binding protein insig. 26 69
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04955 RNA-binding protein no data 27 76