Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Alteromonas macleodii MIT1002 | MIT1002_04188 | | integrase/recombinase | insig. | 100 | 100 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_0342 | | integron integrase | insig. | 48 | 100 |
| Pseudomonas sp. S08-1 | OH686_18870 | | Integron integrase IntIPac | insig. | 48 | 99 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08905 | | integron integrase | cofit | 46 | 95 |
| Rhodanobacter denitrificans MT42 | LRK55_RS08605 | | integron integrase | insig. | 46 | 95 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_15560 | | Integrase | insig. | 46 | 97 |
| Shewanella amazonensis SB2B | Sama_1355 | | phage integrase family site specific recombinase (RefSeq) | insig. | 46 | 100 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.449.1 | | Integrase | insig. | 44 | 95 |
| Shewanella oneidensis MR-1 | SO2037 | | site-specific recombinase, phage integrase family (NCBI ptt file) | insig. | 46 | 99 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_15405 | | integron integrase | insig. | 40 | 98 |
| Shewanella amazonensis SB2B | Sama_1633 | | phage integrase family site specific recombinase (RefSeq) | insig. | 44 | 99 |
| Alteromonas macleodii MIT1002 | MIT1002_00573 | | Tyrosine recombinase XerD | insig. | 39 | 91 |
| Shewanella oneidensis MR-1 | SO2036 | | site-specific recombinase, phage integrase family (NCBI ptt file) | no data | 31 | 96 |
| Shewanella oneidensis MR-1 | SO2528 | | site-specific recombinase, phage integrase family (NCBI ptt file) | no data | 31 | 96 |
| Shewanella oneidensis MR-1 | SO2164 | | site-specific recombinase, phage integrase family (NCBI ptt file) | no data | 30 | 96 |
| Shewanella oneidensis MR-1 | SO2211 | | site-specific recombinase, phage integrase family (NCBI ptt file) | no data | 30 | 96 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS08890 | | site-specific integrase | insig. | 33 | 93 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3270 | | Site-specific recombinase XerD | insig. | 31 | 95 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS16135 | | site-specific integrase | insig. | 33 | 97 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS42770 | | site-specific integrase | insig. | 30 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS42900 | | site-specific integrase | no data | 29 | 98 |
| Bacteroides stercoris CC31F | HMPREF1181_RS09900 | | site-specific integrase | insig. | 32 | 93 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS39850 | | site-specific integrase | no data | 29 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS42300 | | site-specific integrase | no data | 29 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS44560 | | site-specific integrase | no data | 29 | 98 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS04935 | | site-specific integrase | sig. | 32 | 91 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09695 | | integrase | strong | 28 | 98 |
| Burkholderia phytofirmans PsJN | BPHYT_RS05275 | | integrase | no data | 28 | 98 |
| Burkholderia phytofirmans PsJN | BPHYT_RS32945 | | integrase | no data | 28 | 98 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_1244 | | Site-specific recombinase XerD | no data | 29 | 98 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_1749 | | Site-specific recombinase XerD | no data | 29 | 98 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_1789 | | Site-specific recombinase XerD | no data | 29 | 98 |
| Bosea sp. OAE506 | ABIE41_RS00515 | | tyrosine-type recombinase/integrase | insig. | 30 | 98 |
| Magnetospirillum magneticum AMB-1 | AMB_RS04775 | | integrase | insig. | 29 | 98 |
| Dinoroseobacter shibae DFL-12 | Dshi_3700 | | integrase family protein (RefSeq) | insig. | 28 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS44370 | | site-specific integrase | insig. | 29 | 98 |
| Dinoroseobacter shibae DFL-12 | Dshi_3629 | | integrase family protein (RefSeq) | no data | 32 | 97 |
| Dinoroseobacter shibae DFL-12 | Dshi_3661 | | integrase family protein (RefSeq) | no data | 32 | 97 |
| Paraburkholderia graminis OAS925 | ABIE53_001488 | | site-specific recombinase XerD | sig. | 28 | 98 |
| Marinobacter adhaerens HP15 | HP15_762 | | site-specific tyrosine recombinase XerD | insig. | 29 | 69 |
| Marinobacter adhaerens HP15 | HP15_3478 | | integron integrase-like protein | sig. | 28 | 49 |
| Phaeobacter inhibens DSM 17395 | PGA1_c05760 | | putative tyrosine recombinase XerC | strong | 28 | 74 |
| Castellaniella sp019104865 MT123 | ABCV34_RS00515 | | site-specific tyrosine recombinase XerD | insig. | 29 | 76 |
| Mycobacterium tuberculosis H37Rv | Rv1701 | | Probable integrase/recombinase | sig. | 28 | 73 |
| Rhodospirillum rubrum S1H | Rru_A1220 | | Phage integrase (NCBI) | no data | 30 | 89 |
| Acinetobacter radioresistens SK82 | MPMX26_02230 | | Tyrosine recombinase XerC | no data | 28 | 88 |
| Ralstonia solanacearum UW163 | UW163_RS23220 | | recombinase XerC | insig. | 27 | 88 |
| Dinoroseobacter shibae DFL-12 | Dshi_5002 | xerC | hypothetical protein (NCBI) | no data | 28 | 69 |
| Ralstonia solanacearum PSI07 | RPSI07_RS12160 | | site-specific tyrosine recombinase XerD | insig. | 28 | 72 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0359 | | tyrosine recombinase XerD (RefSeq) | strong | 32 | 63 |
| Sinorhizobium meliloti 1021 | SMc02489 | | site-specific tyrosine recombinase XerC | no data | 38 | 40 |
| Ralstonia solanacearum GMI1000 | RS_RS17610 | | recombinase XerC | insig. | 27 | 88 |
| Rhizobium sp. OAE497 | ABIE40_RS17950 | | tyrosine recombinase XerC | insig. | 26 | 69 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS44395 | | tyrosine-type recombinase/integrase | insig. | 55 | 25 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.847.1 | | Site-specific tyrosine recombinase | no data | 30 | 59 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_19035 | | integrase | no data | 24 | 89 |
| Caulobacter crescentus NA1000 | CCNA_00349 | | integrase/recombinase, XerC-CodV family | strong | 25 | 72 |
| Caulobacter crescentus NA1000 Δfur | CCNA_00349 | | integrase/recombinase, XerC-CodV family | cofit | 25 | 72 |
| Shewanella amazonensis SB2B | Sama_3247 | | integrase/recombinase XerC (RefSeq) | strong | 24 | 98 |
| Bacteroides stercoris CC31F | HMPREF1181_RS01250 | | site-specific tyrosine recombinase XerD | insig. | 38 | 40 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS05140 | | site-specific tyrosine recombinase XerD | insig. | 30 | 72 |
| Ralstonia solanacearum UW163 | UW163_RS08485 | | site-specific tyrosine recombinase XerD | insig. | 30 | 72 |
| Ralstonia solanacearum GMI1000 | RS_RS12755 | | tyrosine recombinase XerD | no data | 28 | 72 |
| Agrobacterium fabrum C58 | Atu2628 | | site-specific recombinase | no data | 27 | 73 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU1654 | xerD | site-specific recombinase, phage integrase family (TIGR) | sig. | 36 | 40 |
| Bifidobacterium breve UCC2003 | BBR_RS16655 | | tyrosine recombinase XerC | strong | 33 | 45 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_06385 | | recombinase XerD | strong | 23 | 97 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3145 | | Tyrosine recombinase XerD | no data | 23 | 97 |
| Pseudomonas sp. RS175 | PFR28_00331 | | Tyrosine recombinase XerD | strong | 23 | 96 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_04365 | | recombinase XerD | strong | 23 | 96 |
| Pseudomonas fluorescens SBW25 | PFLU_RS24560 | | site-specific tyrosine recombinase XerD | sig. | 22 | 97 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS24560 | | site-specific tyrosine recombinase XerD | strong | 22 | 97 |
| Alteromonas macleodii MIT1002 | MIT1002_00786 | | Tyrosine recombinase XerD | insig. | 25 | 89 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1286 | | tyrosine recombinase XerD subunit | sig. | 23 | 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1286 | | tyrosine recombinase XerD subunit | sig. | 23 | 96 |
| Lysobacter sp. OAE881 | ABIE51_RS03035 | | tyrosine recombinase XerC | strong | 33 | 43 |
| Escherichia coli BL21 | ECD_03687 | | site-specific tyrosine recombinase | sig. | 30 | 41 |
| Escherichia fergusonii Becca | EFB2_04826 | | Tyrosine recombinase XerC | strong | 30 | 41 |
| Escherichia coli ECOR27 | NOLOHH_06550 | xerC | tyrosine recombinase XerC | insig. | 30 | 41 |
| Escherichia coli ECOR38 | HEPCGN_13125 | xerC | tyrosine recombinase XerC | insig. | 30 | 41 |
| Escherichia coli ECRC62 | BNILDI_04985 | xerC | tyrosine recombinase XerC | insig. | 30 | 41 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04239 | | Tyrosine recombinase XerC | insig. | 30 | 41 |
| Escherichia coli Nissle 1917 | ECOLIN_RS21875 | | tyrosine recombinase XerC | strong | 30 | 41 |
| Escherichia coli BW25113 | b3811 | xerC | site-specific tyrosine recombinase XerC (NCBI) | strong | 30 | 41 |
| Dinoroseobacter shibae DFL-12 | Dshi_3696 | | integrase family protein (RefSeq) | no data | 28 | 80 |
| Dinoroseobacter shibae DFL-12 | Dshi_4006 | | integrase family protein (RefSeq) | no data | 28 | 80 |
| Magnetospirillum magneticum AMB-1 | AMB_RS21485 | | tyrosine recombinase XerC | no data | 37 | 40 |
| Pseudomonas simiae WCS417 | PS417_22895 | | tyrosine recombinase XerD | strong | 22 | 96 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_00850 | | site-specific tyrosine recombinase XerD | no data | 25 | 74 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2843 | | integrase (NCBI ptt file) | strong | 34 | 40 |
| Enterobacter asburiae PDN3 | EX28DRAFT_4480 | | tyrosine recombinase XerC | no data | 28 | 41 |
| Escherichia coli ECRC62 | BNILDI_11380 | xerD | integrase | no data | 25 | 88 |
| Pseudomonas putida KT2440 | PP_5230 | | Tyrosine recombinase XerC | strong | 25 | 89 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS04705 | | site-specific tyrosine recombinase XerD | sig. | 28 | 59 |
| Burkholderia phytofirmans PsJN | BPHYT_RS15950 | | tyrosine recombinase XerD | sig. | 26 | 69 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3011 | | Tyrosine recombinase XerD | insig. | 22 | 97 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS44555 | | tyrosine-type recombinase/integrase | insig. | 27 | 73 |
| Rhizobium sp. OAE497 | ABIE40_RS17685 | | site-specific tyrosine recombinase XerD | sig. | 25 | 73 |
| Methanococcus maripaludis JJ | MMJJ_RS03475 | | tyrosine-type recombinase/integrase | cofit | 25 | 51 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1721 | | Tyrosine recombinase XerD | strong | 22 | 96 |