| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Alteromonas macleodii MIT1002 | MIT1002_02002 | | putative hydrogen peroxide-inducible genes activator | insig. | 100 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS07690 | | LysR family transcriptional regulator | insig. | 43 | 99 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2110 | | LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase | insig. | 42 | 97 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_21655 | | LysR family transcriptional regulator | insig. | 42 | 97 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_23720 | | LysR family transcriptional regulator | no data | 42 | 98 |
| o | Enterobacter sp. TBS_079 | MPMX20_01913 | | HTH-type transcriptional regulator GltC | insig. | 40 | 100 |
| o | Pseudomonas simiae WCS417 | PS417_10530 | | LysR family transcriptional regulator | sig. | 40 | 97 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_1707 | | Transcriptional regulator | insig. | 40 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5832 | | LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase | no data | 42 | 97 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS10590 | | LysR family transcriptional regulator | insig. | 40 | 97 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10590 | | LysR family transcriptional regulator | sig. | 40 | 97 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02200 | | HTH-type transcriptional regulator CynR | cofit | 40 | 97 |
| o | Pseudomonas sp. RS175 | PFR28_01326 | | HTH-type transcriptional regulator GltC | sig. | 41 | 97 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_27930 | | LysR family transcriptional regulator | strong | 40 | 97 |
| o | Pseudomonas sp. DMC3 | GFF998 | | HTH-type transcriptional regulator CynR | cofit | 42 | 97 |
| o | Pseudomonas orientalis W4I3 | QF045_RS12505 | | LysR substrate-binding domain-containing protein | insig. | 40 | 97 |
| o | Escherichia coli ECOR27 | NOLOHH_18985 | | LysR family transcriptional regulator | insig. | 39 | 100 |
| o | Escherichia coli ECRC62 | BNILDI_17470 | | LysR family transcriptional regulator | insig. | 39 | 100 |
| o | Pseudomonas segetis P6 | MPMX49_02804 | | HTH-type transcriptional regulator GltC | insig. | 39 | 97 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS16175 | | LysR family transcriptional regulator | strong | 41 | 97 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_09765 | | LysR family transcriptional regulator | no data | 41 | 97 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS38495 | | LysR family transcriptional regulator | strong | 41 | 97 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_3236 | | transcriptional regulator, LysR family | strong | 39 | 98 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3236 | | transcriptional regulator, LysR family | insig. | 39 | 98 |
| o | Pseudomonas sp. BP01 | JOY50_RS21470 | | LysR family transcriptional regulator | insig. | 41 | 98 |
| o | Pseudomonas putida KT2440 | PP_3121 | | transcriptional regulator, LysR family | strong | 42 | 96 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS12920 | | LysR family transcriptional regulator | no data | 35 | 91 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS31250 | | LysR family transcriptional regulator | insig. | 33 | 96 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS21140 | | LysR family transcriptional regulator | insig. | 31 | 100 |
| | Pseudomonas sp. RS175 | PFR28_01830 | | HTH-type transcriptional regulator CynR | insig. | 32 | 93 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS22410 | | LysR family transcriptional regulator | insig. | 32 | 99 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03809 | | transcriptional regulator, LysR family | insig. | 32 | 96 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_2899 | | Probable LysR-family transcriptional regulator | insig. | 29 | 98 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS08035 | | LysR family transcriptional regulator | insig. | 29 | 98 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004438 | | DNA-binding transcriptional LysR family regulator | insig. | 32 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS20345 | | LysR family transcriptional regulator | insig. | 32 | 96 |
| o | Variovorax sp. OAS795 | ABID97_RS05470 | | LysR family transcriptional regulator | no data | 31 | 99 |
| o | Variovorax sp. SCN45 | GFF885 | | Transcriptional regulator, LysR family | insig. | 31 | 99 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05098 | | DNA-binding transcriptional regulator, LysR family | insig. | 29 | 98 |
| o | Azospirillum sp. SherDot2 | MPMX19_02886 | | HTH-type transcriptional regulator CynR | insig. | 32 | 95 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS11120 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| o | Rhodospirillum rubrum S1H | Rru_A1466 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 33 | 95 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07335 | | LysR family transcriptional regulator | insig. | 29 | 95 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07335 | | LysR family transcriptional regulator | insig. | 29 | 95 |
| | Pseudomonas segetis P6 | MPMX49_02953 | | HTH-type transcriptional regulator CynR | insig. | 31 | 93 |
| o | Agrobacterium fabrum C58 | Atu4264 | | LysR family transcriptional regulator | strong | 30 | 96 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01591 | | Hydrogen peroxide-inducible genes activator | cofit | 30 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_006109 | | DNA-binding transcriptional LysR family regulator | insig. | 29 | 95 |
| | Pseudomonas simiae WCS417 | PS417_07220 | | LysR family transcriptional regulator | insig. | 29 | 95 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23130 | | LysR family transcriptional regulator | insig. | 28 | 98 |
| | Variovorax sp. SCN45 | GFF6826 | | Transcriptional regulator, LysR family | no data | 31 | 98 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4462 | | LysR family transcriptional regulator YbhD | insig. | 30 | 95 |
| | Pseudomonas orientalis W4I3 | QF045_RS09925 | | LysR family transcriptional regulator | insig. | 29 | 95 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS27430 | | LysR family transcriptional regulator | insig. | 29 | 96 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS28100 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| | Pseudomonas sp. BP01 | JOY50_RS22305 | | LysR family transcriptional regulator | insig. | 30 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_001823 | | DNA-binding transcriptional LysR family regulator | insig. | 28 | 98 |
| | Pseudomonas putida KT2440 | PP_2054 | | putative DNA-binding transcriptional regulator | sig. | 30 | 95 |
| | Pseudomonas sp. SVBP6 | COO64_RS20555 | | LysR family transcriptional regulator | insig. | 29 | 95 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS14945 | | LysR family transcriptional regulator | insig. | 29 | 95 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS14945 | | LysR family transcriptional regulator | strong | 29 | 95 |
| o | Dickeya dadantii 3937 | DDA3937_RS07805 | | LysR family transcriptional regulator | insig. | 28 | 96 |
| | Variovorax sp. SCN45 | GFF6064 | | Transcriptional regulator YfeR, LysR family | no data | 28 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_03557 | | HTH-type transcriptional regulator CynR | insig. | 30 | 93 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3165 | | transcriptional regulator, LysR family | insig. | 28 | 93 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3165 | | transcriptional regulator, LysR family | insig. | 28 | 93 |
| | Azospirillum brasilense Sp245 | AZOBR_RS28540 | | LysR family transcriptional regulator | insig. | 28 | 98 |
| | Pseudomonas sp. RS175 | PFR28_01942 | | HTH-type transcriptional regulator CynR | strong | 29 | 95 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_28895 | | LysR family transcriptional regulator | insig. | 29 | 95 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS28580 | | LysR family transcriptional regulator | insig. | 31 | 96 |
| | Pseudomonas simiae WCS417 | PS417_19375 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS21345 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21345 | | LysR family transcriptional regulator | sig. | 30 | 98 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS23045 | | LysR family transcriptional regulator | insig. | 29 | 98 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS13840 | | LysR family transcriptional regulator | no data | 28 | 98 |
| | Variovorax sp. OAS795 | ABID97_RS27955 | | LysR family transcriptional regulator | insig. | 28 | 99 |
| o | Escherichia fergusonii Becca | EFB2_01468 | | HTH-type transcriptional regulator CynR | insig. | 28 | 98 |
| | Escherichia coli ECOR27 | NOLOHH_13910 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 28 | 98 |
| | Escherichia coli ECRC62 | BNILDI_12775 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 28 | 98 |
| o | Escherichia coli BW25113 | b2409 | yfeR | predicted DNA-binding transcriptional regulator (NCBI) | sig. | 28 | 98 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS38040 | | LysR family transcriptional regulator | insig. | 29 | 94 |
| | Escherichia coli ECOR27 | NOLOHH_23100 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 29 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02618 | | transcriptional regulator, LysR family | insig. | 28 | 98 |
| o | Pantoea sp. MT58 | IAI47_10140 | | LysR family transcriptional regulator | insig. | 27 | 98 |
| | Escherichia coli BW25113 | b0768 | ybhD | predicted DNA-binding transcriptional regulator (RefSeq) | insig. | 29 | 96 |
| o | Escherichia coli BL21 | ECD_02308 | | transcriptional regulator of yefH | insig. | 28 | 98 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01315 | | HTH-type transcriptional regulator CynR | insig. | 28 | 98 |
| | Escherichia fergusonii Becca | EFB2_03338 | | Hydrogen peroxide-inducible genes activator | insig. | 29 | 96 |
| o | Escherichia coli ECOR38 | HEPCGN_01605 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 29 | 96 |
| o | Escherichia coli ECRC100 | OKFHMN_06670 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 29 | 96 |
| o | Escherichia coli ECRC101 | MCAODC_25890 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 29 | 96 |
| o | Escherichia coli ECRC102 | NIAGMN_04720 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 29 | 96 |
| | Escherichia coli ECRC62 | BNILDI_21095 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 29 | 96 |
| o | Escherichia coli ECRC98 | JDDGAC_10325 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | insig. | 29 | 96 |
| o | Escherichia coli ECRC99 | KEDOAH_21295 | ybhD | Uncharacterized HTH-type transcriptional regulator YbhD | no data | 29 | 96 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02945 | | Hydrogen peroxide-inducible genes activator | insig. | 29 | 96 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS04090 | | LysR family transcriptional regulator | no data | 29 | 96 |
| | Escherichia coli ECRC100 | OKFHMN_22230 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 28 | 98 |
| | Escherichia coli ECRC101 | MCAODC_12760 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 28 | 98 |
| | Escherichia coli ECRC98 | JDDGAC_26180 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 28 | 98 |