Homologs of HSERO_RS08590 from Herbaspirillum seropedicae SmR1

pseudouridine synthase
SEED: Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal small subunit pseudouridine synthase A

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS08590 pseudouridine synthase insig. 100 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS08605 pseudouridine synthase insig. 54 98
o Cupriavidus basilensis FW507-4G11 RR42_RS15880 pseudouridine synthase insig. 58 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS12605 16S rRNA pseudouridine(516) synthase insig. 53 98
o Ralstonia solanacearum UW163 UW163_RS00960 16S rRNA pseudouridine(516) synthase insig. 53 98
o Ralstonia solanacearum PSI07 RPSI07_RS20655 16S rRNA pseudouridine(516) synthase insig. 52 98
o Ralstonia solanacearum GMI1000 RS_RS03390 16S rRNA pseudouridine(516) synthase insig. 53 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS03150 16S rRNA pseudouridine(516) synthase insig. 51 97
o Dechlorosoma suillum PS Dsui_0824 pseudouridine synthase family protein insig. 50 98
o Paraburkholderia graminis OAS925 ABIE53_003276 16S rRNA pseudouridine516 synthase insig. 51 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04053 ribosomal small subunit pseudouridine synthase A (EC 5.4.99.-) insig. 52 94
o Burkholderia phytofirmans PsJN BPHYT_RS15560 pseudouridine synthase insig. 51 97
o Acinetobacter radioresistens SK82 MPMX26_01203 Ribosomal small subunit pseudouridine synthase A insig. 48 96
o Variovorax sp. OAS795 ABID97_RS09900 16S rRNA pseudouridine(516) synthase insig. 48 97
o Variovorax sp. SCN45 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) insig. 47 97
  Acidovorax sp. GW101-3H11 Ac3H11_4423 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 49 80
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5277 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) cofit 42 97
o Magnetospirillum magneticum AMB-1 AMB_RS12445 rRNA pseudouridine synthase insig. 40 97
o Erwinia tracheiphila SCR3 LU632_RS17595 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 35 96
o Fusobacterium nucleatum SB010 HUW76_04445 rRNA pseudouridine synthase cofit 34 91
o Caulobacter crescentus NA1000 CCNA_01915 ribosomal small subunit pseudouridine synthase A strong 38 87
o Caulobacter crescentus NA1000 Δfur CCNA_01915 ribosomal small subunit pseudouridine synthase A cofit 38 87
o Rhodanobacter sp. FW510-T8 OKGIIK_09050 Pseudouridine synthase cofit 38 97
o Rhodanobacter denitrificans MT42 LRK55_RS15690 pseudouridine synthase cofit 38 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS15935 rRNA pseudouridine synthase strong 38 97
o Shewanella sp. ANA-3 Shewana3_0760 ribosomal small subunit pseudouridine synthase A (RefSeq) insig. 36 95
o Escherichia coli BL21 ECD_02113 16S rRNA pseudouridine(516) synthase insig. 35 97
o Escherichia fergusonii Becca EFB2_01673 Ribosomal small subunit pseudouridine synthase A insig. 35 97
o Escherichia coli ECOR27 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA no data 35 97
o Escherichia coli ECOR38 HEPCGN_22625 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 35 97
o Escherichia coli ECRC101 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 35 97
o Escherichia coli ECRC101 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 35 97
o Escherichia coli ECRC102 NIAGMN_21125 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 35 97
o Escherichia coli ECRC62 BNILDI_13855 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 35 97
o Escherichia coli ECRC98 JDDGAC_27320 rsuA 16S rRNA pseudouridine(516) synthase RsuA no data 35 97
o Escherichia coli ECRC99 KEDOAH_04825 rsuA 16S rRNA pseudouridine(516) synthase RsuA no data 35 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01526 Ribosomal small subunit pseudouridine synthase A insig. 35 97
o Escherichia coli Nissle 1917 ECOLIN_RS12760 16S rRNA pseudouridine(516) synthase RsuA no data 35 97
o Escherichia coli BW25113 b2183 rsuA 16S rRNA pseudouridylate 516 synthase (NCBI) strong 35 97
o Dickeya dadantii 3937 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA insig. 35 96
o Pantoea sp. MT58 IAI47_06585 16S rRNA pseudouridine(516) synthase RsuA sig. 34 96
o Rahnella sp. WP5 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA insig. 34 96
o Pectobacterium carotovorum WPP14 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA insig. 34 96
o Dickeya dianthicola ME23 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA insig. 35 96
o Dickeya dianthicola 67-19 HGI48_RS09200 16S rRNA pseudouridine(516) synthase RsuA insig. 35 96
o Serratia liquefaciens MT49 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA insig. 34 96
o Shewanella amazonensis SB2B Sama_2614 pseudouridine synthase, Rsu (RefSeq) insig. 35 96
o Enterobacter sp. TBS_079 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A insig. 34 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4611.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 36 97
o Marinobacter adhaerens HP15 HP15_3359 pseudouridine synthase, Rsu insig. 38 95
o Klebsiella michiganensis M5al BWI76_RS19810 16S rRNA pseudouridine(516) synthase no data 34 96
o Enterobacter asburiae PDN3 EX28DRAFT_0378 pseudouridine synthase insig. 33 96
o Lysobacter sp. OAE881 ABIE51_RS18480 pseudouridine synthase cofit 36 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_08220 16S rRNA pseudouridine(516) synthase insig. 34 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 32 96
o Shewanella loihica PV-4 Shew_2975 pseudouridine synthase (RefSeq) insig. 32 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS00325 16S rRNA pseudouridine(516) synthase insig. 35 95
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11350 pseudouridine synthase insig. 38 95
  Shewanella amazonensis SB2B Sama_2785 pseudouridine synthase, Rsu (RefSeq) insig. 33 96
o Rhizobium sp. OAE497 ABIE40_RS15330 pseudouridine synthase cofit 31 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1843.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 30 97
  Mycobacterium tuberculosis H37Rv Rv1711 Conserved hypothetical protein no data 32 88
  Desulfovibrio vulgaris Miyazaki F DvMF_0369 pseudouridine synthase (RefSeq) sig. 32 90
  Shewanella loihica PV-4 Shew_0916 pseudouridine synthase (RefSeq) insig. 29 95
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3297 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 30 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08925 23S rRNA pseudouridine synthase F insig. 29 98
  Rhodanobacter sp. FW510-T8 OKGIIK_16610 Pseudouridine synthase insig. 28 98
  Marinobacter adhaerens HP15 HP15_2675 pseudouridine synthase, Rsu insig. 29 98
o Pseudomonas fluorescens FW300-N2E3 AO353_17535 16S rRNA pseudouridine(516) synthase insig. 28 97
  Shewanella sp. ANA-3 Shewana3_0916 pseudouridine synthase, Rsu (RefSeq) insig. 34 97
o Pseudomonas fluorescens FW300-N2C3 AO356_04690 16S rRNA pseudouridine(516) synthase insig. 30 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16400 pseudouridine synthase cofit 27 98
o Pseudomonas syringae pv. syringae B728a Psyr_3981 ribosomal small subunit pseudouridine synthase A insig. 29 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3981 ribosomal small subunit pseudouridine synthase A insig. 29 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0719 pseudouridine synthase no data 29 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07025 pseudouridine synthase insig. 28 98
o Pseudomonas stutzeri RCH2 Psest_3049 pseudouridine synthase insig. 30 96
  Rhodanobacter denitrificans MT42 LRK55_RS06765 pseudouridine synthase insig. 28 98
  Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 27 97
  Pectobacterium carotovorum WPP14 HER17_RS10900 23S rRNA pseudouridine(2605) synthase RluB strong 34 96
  Lysobacter sp. OAE881 ABIE51_RS12720 pseudouridine synthase insig. 29 97
o Pseudomonas sp. RS175 PFR28_00665 Ribosomal small subunit pseudouridine synthase A insig. 30 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2785 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 29 97
o Pseudomonas putida KT2440 PP_1409 ribosomal small subunit pseudouridine synthase A insig. 28 96
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08410 pseudouridine synthase insig. 35 97
  Shewanella sp. ANA-3 Shewana3_3175 pseudouridine synthase, Rsu (RefSeq) insig. 30 95
  Dickeya dianthicola 67-19 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB sig. 34 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18660 pseudouridine synthase no data 29 97
  Dickeya dianthicola ME23 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB sig. 34 91
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13170 pseudouridine synthase insig. 34 66
  Rhodanobacter denitrificans MT42 LRK55_RS00435 pseudouridine synthase insig. 32 96
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00665 rRNA pseudouridine synthase insig. 32 96
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07850 pseudouridine synthase insig. 30 96
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2719 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) sig. 33 96
  Escherichia coli BL21 ECD_01245 23S rRNA pseudouridine(2605) synthase strong 32 96
  Escherichia coli ECOR27 NOLOHH_20295 rluB 23S rRNA pseudouridine(2605) synthase RluB cofit 32 96
  Escherichia coli ECOR38 HEPCGN_25560 rluB 23S rRNA pseudouridine(2605) synthase RluB cofit 32 96
  Escherichia coli ECRC101 OKFHMN_02630 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 32 96
  Escherichia coli ECRC101 MCAODC_15635 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 32 96
  Escherichia coli ECRC102 NIAGMN_26800 rluB 23S rRNA pseudouridine(2605) synthase RluB no data 32 96