Homologs of HMPREF1078_RS00720 from Parabacteroides merdae CL09T00C40

LysR family transcriptional regulator
SEED: LysR family transcriptional regulator YeiE

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00720 LysR family transcriptional regulator insig. 100 100
o Bacteroides ovatus ATCC 8483 BACOVA_05396 LysR substrate binding domain protein insig. 60 100
o Bacteroides stercoris CC31F HMPREF1181_RS11950 LysR family transcriptional regulator cofit 59 99
o Phocaeicola dorei CL03T12C01 ABI39_RS18875 LysR family transcriptional regulator insig. 57 98
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04990 LysR family transcriptional regulator insig. 57 98
o Bacteroides thetaiotaomicron VPI-5482 BT4599 putative transcriptional regulator (NCBI ptt file) strong 57 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1204 Transcriptional regulator strong 48 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12590 LysR family transcriptional regulator sig. 46 98
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19075 LysR substrate-binding domain-containing protein cofit 40 98
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07870 LysR family transcriptional regulator insig. 40 99
o Dechlorosoma suillum PS Dsui_2410 transcriptional regulator cofit 36 85
o Desulfovibrio vulgaris Hildenborough JW710 DVU1331 transcriptional regulator, LysR family (TIGR) sig. 33 91
o Synechococcus elongatus PCC 7942 Synpcc7942_1310 cmpR ndhF3 operon transcriptional regulator no data 33 97
o Escherichia coli BL21 ECD_02086 putative DNA-binding transcriptional regulator insig. 35 87
o Escherichia coli ECOR38 HEPCGN_22760 yieE DNA-binding transcriptional regulator YeiE insig. 35 87
o Escherichia coli ECRC100 OKFHMN_23495 yieE DNA-binding transcriptional regulator YeiE cofit 35 87
o Escherichia coli ECRC101 MCAODC_14545 yieE DNA-binding transcriptional regulator YeiE cofit 35 87
o Escherichia coli ECRC102 NIAGMN_21260 yieE DNA-binding transcriptional regulator YeiE insig. 35 87
o Escherichia coli ECRC62 BNILDI_13990 yieE DNA-binding transcriptional regulator YeiE cofit 35 87
o Escherichia coli ECRC98 JDDGAC_27455 yieE DNA-binding transcriptional regulator YeiE insig. 35 87
o Escherichia coli ECRC99 KEDOAH_04690 yieE DNA-binding transcriptional regulator YeiE no data 35 87
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01554 HTH-type transcriptional regulator CysL insig. 35 87
o Escherichia coli Nissle 1917 ECOLIN_RS12630 DNA-binding transcriptional regulator YeiE insig. 35 87
o Escherichia coli BW25113 b2157 yeiE predicted DNA-binding transcriptional regulator (NCBI) insig. 35 87
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3777 LysR family transcriptional regulator YeiE insig. 34 87
o Dickeya dadantii 3937 DDA3937_RS09260 LysR family transcriptional regulator insig. 33 98
o Enterobacter asburiae PDN3 EX28DRAFT_0399 Transcriptional regulator sig. 33 97
o Klebsiella michiganensis M5al BWI76_RS19690 LysR family transcriptional regulator insig. 35 86
o Rhodospirillum rubrum S1H Rru_A0606 Transcriptional Regulator, LysR family (NCBI) no data 34 96
o Dickeya dianthicola 67-19 HGI48_RS09285 LysR family transcriptional regulator insig. 33 98
o Dickeya dianthicola ME23 DZA65_RS09590 LysR family transcriptional regulator insig. 33 98
o Desulfovibrio vulgaris Miyazaki F DvMF_0108 transcriptional regulator, LysR family (RefSeq) insig. 33 92
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.979.1 LysR family transcriptional regulator YeiE insig. 35 87
  Dechlorosoma suillum PS Dsui_2257 transcriptional regulator cofit 35 91
o Pectobacterium carotovorum WPP14 HER17_RS12840 LysR family transcriptional regulator cofit 33 98
o Pseudomonas putida KT2440 PP_3660 Transcriptional regulator, LysR family insig. 34 84
o Serratia liquefaciens MT49 IAI46_17215 LysR family transcriptional regulator insig. 36 86
o Enterobacter sp. TBS_079 MPMX20_03128 HTH-type transcriptional activator CmpR sig. 32 97
o Escherichia fergusonii Becca EFB2_01699 HTH-type transcriptional regulator CysL insig. 34 81
o Escherichia coli ECOR27 NOLOHH_15070 yieE DNA-binding transcriptional regulator YeiE insig. 34 81
o Rahnella sp. WP5 EX31_RS19050 LysR family transcriptional regulator insig. 36 86
o Azospirillum sp. SherDot2 MPMX19_00813 HTH-type transcriptional regulator CysL insig. 32 87
  Pseudomonas syringae pv. syringae B728a Psyr_1478 regulatory protein, LysR:LysR, substrate-binding protein insig. 35 86
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1478 regulatory protein, LysR:LysR, substrate-binding protein insig. 35 86
o Pseudomonas fluorescens SBW25 PFLU_RS09365 LysR family transcriptional regulator insig. 35 85
o Pseudomonas fluorescens SBW25-INTG PFLU_RS09365 LysR family transcriptional regulator sig. 35 85
o Pantoea sp. MT58 IAI47_06680 LysR family transcriptional regulator strong 33 90
o Pseudomonas sp. S08-1 OH686_10780 Transcriptional regulator, LysR family insig. 33 89
o Erwinia tracheiphila SCR3 LU632_RS17295 LysR family transcriptional regulator insig. 33 86
  Pseudomonas syringae pv. syringae B728a Psyr_3312 transcriptional regulator, LysR family sig. 33 87
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3312 transcriptional regulator, LysR family insig. 33 87
  Agrobacterium fabrum C58 Atu0672 transcriptional regulator, LysR family insig. 35 77
o Ralstonia solanacearum GMI1000 RS_RS05515 LysR family transcriptional regulator insig. 33 86
o Pseudomonas fluorescens FW300-N2E3 AO353_16845 LysR family transcriptional regulator sig. 33 91
o Pseudomonas stutzeri RCH2 Psest_2863 Transcriptional regulator strong 32 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05209 transcriptional regulator, LysR family strong 32 86
o Shewanella amazonensis SB2B Sama_1501 LysR family transcriptional regulator (RefSeq) insig. 30 92
o Ralstonia solanacearum PSI07 RPSI07_RS18655 LysR family transcriptional regulator sig. 33 86
  Variovorax sp. OAS795 ABID97_RS12840 LysR family transcriptional regulator no data 32 88
  Pseudomonas sp. S08-1 OH686_18820 Transcriptional regulator, LysR family insig. 32 91
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14705 LysR family transcriptional regulator insig. 33 86
o Ralstonia solanacearum UW163 UW163_RS12175 LysR family transcriptional regulator insig. 33 86
o Paraburkholderia sabiae LMG 24235 QEN71_RS34015 LysR family transcriptional regulator insig. 31 88
  Synechococcus elongatus PCC 7942 Synpcc7942_1980 rbcR transcriptional regulator, LysR family no data 28 91
o Variovorax sp. SCN45 GFF1740 Transcriptional regulator, LysR family insig. 32 88
o Vibrio cholerae E7946 ATCC 55056 CSW01_16940 LysR family transcriptional regulator insig. 30 91
o Pseudomonas fluorescens FW300-N2C3 AO356_05630 LysR family transcriptional regulator sig. 32 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3152 LysR family transcriptional regulator PA3398 sig. 33 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03013 transcriptional regulator, LysR family insig. 30 88
o Rhodopseudomonas palustris CGA009 TX73_009100 LysR family transcriptional regulator insig. 34 86
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2984 LysR family transcriptional regulator PA3398 strong 32 91
o Paraburkholderia graminis OAS925 ABIE53_005077 DNA-binding transcriptional LysR family regulator sig. 30 88
o Burkholderia phytofirmans PsJN BPHYT_RS29890 LysR family transcriptional regulator insig. 30 88
  Pseudomonas sp. RS175 PFR28_00480 HTH-type transcriptional activator CmpR sig. 32 91
  Rhodospirillum rubrum S1H Rru_A2401 RuBisCO transcriptional regulator cbbR, LysR family (NCBI) strong 29 90
  Pseudomonas putida KT2440 PP_1637 Transcriptional regulator, LysR family sig. 32 91
o Herbaspirillum seropedicae SmR1 HSERO_RS21575 transcriptional regulator insig. 36 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS20425 LysR family transcriptional regulator insig. 30 88
  Burkholderia phytofirmans PsJN BPHYT_RS07470 LysR family transcriptional regulator no data 31 90
o Castellaniella sp019104865 MT123 ABCV34_RS05920 LysR substrate-binding domain-containing protein insig. 28 91
  Pseudomonas syringae pv. syringae B728a Psyr_1386 transcriptional regulator, LysR family insig. 32 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1386 transcriptional regulator, LysR family insig. 32 91
  Pseudomonas fluorescens SBW25 PFLU_RS05920 LysR family transcriptional regulator insig. 32 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05920 LysR family transcriptional regulator sig. 32 91
  Cupriavidus basilensis FW507-4G11 RR42_RS26205 LysR family transcriptional regulator insig. 30 90
o Pseudomonas simiae WCS417 PS417_05850 LysR family transcriptional regulator strong 32 91
o Acinetobacter radioresistens SK82 MPMX26_02541 HTH-type transcriptional regulator CysL strong 29 97
  Paraburkholderia graminis OAS925 ABIE53_002341 DNA-binding transcriptional LysR family regulator insig. 31 86
  Cupriavidus basilensis FW507-4G11 RR42_RS13965 LysR family transcriptional regulator insig. 33 86
  Shewanella amazonensis SB2B Sama_1882 LysR family transcriptional regulator (RefSeq) sig. 31 99
o Shewanella loihica PV-4 Shew_2387 LysR family transcriptional regulator (RefSeq) sig. 30 92
  Pseudomonas fluorescens SBW25 PFLU_RS29885 LysR family transcriptional regulator strong 26 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29885 LysR family transcriptional regulator strong 26 94
  Ralstonia sp. UNC404CL21Col ABZR87_RS10365 LysR family transcriptional regulator insig. 33 85
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4660 LysR family transcriptional regulator PA3398 insig. 32 86
  Enterobacter asburiae PDN3 EX28DRAFT_0162 Transcriptional regulator insig. 30 83
  Pseudomonas syringae pv. syringae B728a Psyr_5062 transcriptional regulator, LysR family strong 26 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5062 transcriptional regulator, LysR family sig. 26 92
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01115 LysR substrate-binding domain-containing protein insig. 32 87
  Pseudomonas sp. S08-1 OH686_13195 Transcriptional regulator, LysR family strong 27 95