| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Variovorax sp. SCN45 | GFF5976 | | Transcriptional regulator, AraC family | insig. | 100 | 100 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS26745 | | AraC family transcriptional regulator | insig. | 51 | 93 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33185 | | AraC family transcriptional regulator | insig. | 50 | 87 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS09535 | | AraC family transcriptional regulator | insig. | 47 | 94 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS06530 | | helix-turn-helix domain-containing protein | insig. | 43 | 93 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS11190 | | helix-turn-helix domain-containing protein | insig. | 42 | 92 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS38340 | | AraC family transcriptional regulator | insig. | 76 | 32 |
| | Agrobacterium fabrum C58 | Atu4132 | | AraC family transcriptional regulator | insig. | 28 | 92 |
| | Sinorhizobium meliloti 1021 | SMc00479 | | transcriptional regulator | insig. | 25 | 89 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4386 | | Transcriptional regulator, AraC family | insig. | 27 | 93 |
| | Rhodopseudomonas palustris CGA009 | TX73_008435 | | helix-turn-helix domain-containing protein | insig. | 27 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33405 | | hypothetical protein | insig. | 28 | 94 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS18500 | | AraC family transcriptional regulator | insig. | 29 | 74 |
| | Sinorhizobium meliloti 1021 | SM_b20457 | | transcriptional regulator transcription regulator protein | insig. | 23 | 93 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1186 | | AraC-type DNA-binding domain-containing proteins | insig. | 27 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_005740 | | AraC-like DNA-binding protein | sig. | 25 | 93 |
| | Caulobacter crescentus NA1000 | CCNA_00750 | | FeaR-family transcriptional regulator | strong | 26 | 88 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_00750 | | FeaR-family transcriptional regulator | cofit | 26 | 88 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2213 | | transcriptional regulator, AraC family | insig. | 25 | 90 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2213 | | transcriptional regulator, AraC family | insig. | 25 | 90 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS01925 | | AraC family transcriptional regulator | insig. | 28 | 61 |
| | Variovorax sp. OAS795 | ABID97_RS26140 | | acetamidase/formamidase family protein | insig. | 33 | 37 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS19895 | | AraC family transcriptional regulator | insig. | 37 | 33 |
| | Escherichia coli BL21 | ECD_01356 | | transcriptional activator for tynA and feaB | no data | 26 | 62 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02327 | | Transcriptional activator FeaR | insig. | 26 | 62 |
| | Variovorax sp. SCN45 | GFF5188 | | no description | insig. | 26 | 90 |
| | Variovorax sp. OAS795 | ABID97_RS24570 | | helix-turn-helix domain-containing protein | insig. | 29 | 50 |
| | Pseudomonas sp. SVBP6 | COO64_RS13730 | feaR | transcriptional regulator FeaR | insig. | 35 | 29 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1324 | | Transcriptional regulator, AraC family | insig. | 34 | 37 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02372 | | Transcriptional activator FeaR | no data | 35 | 29 |
| | Pseudomonas protegens RBAN4 | FABNJH_16485 | feaR | transcriptional regulator FeaR | insig. | 34 | 29 |
| | Escherichia coli ECOR27 | NOLOHH_19510 | feaR | transcriptional regulator FeaR | insig. | 25 | 62 |
| | Escherichia coli ECRC62 | BNILDI_17965 | feaR | transcriptional regulator FeaR | cofit | 25 | 62 |
| | Escherichia coli BW25113 | b1384 | feaR | DNA-binding transcriptional dual regulator (NCBI) | sig. | 25 | 62 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_25510 | | transcriptional regulator | insig. | 35 | 29 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS21385 | | AraC family transcriptional regulator | insig. | 31 | 49 |
| | Ralstonia solanacearum UW163 | UW163_RS17805 | | AraC family transcriptional regulator | no data | 31 | 49 |
| | Ralstonia solanacearum UW163 | UW163_RS23635 | | AraC family transcriptional regulator | no data | 31 | 49 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3207 | | Transcriptional regulator, AraC family | insig. | 30 | 58 |
| | Variovorax sp. OAS795 | ABID97_RS13065 | | helix-turn-helix domain-containing protein | insig. | 29 | 63 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS02940 | | response regulator | insig. | 34 | 29 |
| | Pseudomonas orientalis W4I3 | QF045_RS12855 | | transcriptional regulator FeaR | insig. | 33 | 29 |
| | Paraburkholderia graminis OAS925 | ABIE53_001928 | | acetamidase/formamidase/AraC-like DNA-binding protein | insig. | 29 | 52 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS04695 | | AraC family transcriptional regulator | insig. | 25 | 70 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS05430 | | hybrid sensor histidine kinase/response regulator transcription factor | insig. | 30 | 32 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS12065 | | helix-turn-helix domain-containing protein | insig. | 24 | 91 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_16340 | | AraC family transcriptional regulator | insig. | 43 | 24 |
| | Pseudomonas simiae WCS417 | PS417_17900 | | transcriptional regulator | insig. | 34 | 29 |
| | Variovorax sp. SCN45 | GFF6734 | | Transcriptional regulator, AraC family | insig. | 32 | 49 |
| | Cellulophaga baltica 18 | M666_RS02185 | | two-component regulator propeller domain-containing protein | insig. | 33 | 28 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS16000 | | transcriptional regulator FeaR | insig. | 33 | 29 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS16000 | | transcriptional regulator FeaR | insig. | 33 | 29 |
| | Variovorax sp. OAS795 | ABID97_RS17450 | | helix-turn-helix domain-containing protein | insig. | 24 | 93 |
| | Caulobacter crescentus NA1000 | CCNA_02482 | | AraC-family transcriptional regulator | cofit | 27 | 90 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02482 | | AraC-family transcriptional regulator | cofit | 27 | 90 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2340 | | Transcriptional regulator, AraC family | insig. | 32 | 44 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS40200 | | AraC family transcriptional regulator | insig. | 41 | 24 |
| | Escherichia coli BL21 | ECD_03839 | | AraC family putative transcriptional activator | insig. | 33 | 47 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04096 | | HTH-type transcriptional activator RhaS | insig. | 33 | 47 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS10630 | | helix-turn-helix domain-containing protein | insig. | 31 | 34 |
| | Variovorax sp. OAS795 | ABID97_RS13025 | | helix-turn-helix domain-containing protein | insig. | 27 | 62 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0008 | | transcriptional regulator, AraC family | insig. | 24 | 60 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0008 | | transcriptional regulator, AraC family | insig. | 24 | 60 |
| | Pseudomonas putida KT2440 | PP_3516 | | Transcriptional regulator, AraC family | strong | 23 | 90 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_20980 | | transcriptional regulator FeaR | insig. | 23 | 89 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS00840 | | AraC family transcriptional regulator | sig. | 41 | 24 |
| | Shewanella loihica PV-4 | Shew_0371 | | AraC family transcriptional regulator (RefSeq) | insig. | 36 | 25 |
| | Escherichia coli ECOR27 | NOLOHH_05750 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 33 | 47 |
| | Escherichia coli ECOR38 | HEPCGN_12250 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 33 | 47 |
| | Escherichia coli ECRC100 | OKFHMN_13605 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 33 | 47 |
| | Escherichia coli ECRC101 | MCAODC_04105 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 33 | 47 |
| | Escherichia coli ECRC102 | NIAGMN_11355 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 33 | 47 |
| | Escherichia coli ECRC62 | BNILDI_05775 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 33 | 47 |
| | Escherichia coli ECRC98 | JDDGAC_17230 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 33 | 47 |
| | Escherichia coli ECRC99 | KEDOAH_14555 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | no data | 33 | 47 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS22825 | | AraC family transcriptional regulator | insig. | 33 | 47 |
| | Escherichia coli BW25113 | b3954 | yijO | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 33 | 47 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02661 | | transcriptional regulator, AraC family with amidase-like domain | insig. | 33 | 37 |
| | Rahnella sp. WP5 | EX31_RS14690 | | helix-turn-helix transcriptional regulator | insig. | 33 | 35 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS14910 | | helix-turn-helix domain-containing protein | insig. | 31 | 34 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS47830 | feaR;go_function=DNA-binding | transcriptional regulator FeaR | insig. | 23 | 89 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS27820 | feaR;go_function=DNA-binding | transcriptional regulator FeaR | insig. | 23 | 89 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3750 | | Transcriptional activator feaR | insig. | 30 | 60 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01894 | | transcriptional regulator, AraC family | strong | 32 | 32 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_09345 | | AraC family transcriptional regulator | insig. | 34 | 35 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1645 | | Signal transduction histidine kinase | insig. | 29 | 29 |
| | Escherichia fergusonii Becca | EFB2_04660 | | HTH-type transcriptional activator RhaS | insig. | 32 | 47 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02865 | | HTH-type transcriptional activator RhaR | insig. | 36 | 31 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02648 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | cofit | 35 | 29 |
| | Rahnella sp. WP5 | EX31_RS16720 | | helix-turn-helix domain-containing protein | sig. | 32 | 36 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS32145 | | hypothetical protein | insig. | 36 | 34 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05614 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | insig. | 33 | 29 |
| | Acinetobacter baumannii LAC-4 | RR41_RS13635 | | transcriptional regulator FeaR | no data | 30 | 29 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4417 | | Helix-turn-helix domain | insig. | 30 | 44 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2623 | | transcriptional regulator, AraC family | insig. | 27 | 56 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS00635 | | substrate-binding domain-containing protein | strong | 29 | 36 |
| | Pseudomonas sp. SVBP6 | COO64_RS21800 | | AraC family transcriptional regulator | insig. | 38 | 24 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_28535 | | AraC family transcriptional regulator | insig. | 38 | 31 |
| | Pseudomonas sp. BP01 | JOY50_RS01115 | | AraC family transcriptional regulator | insig. | 34 | 30 |
| | Pseudomonas putida KT2440 | PP_4508 | | putative transcriptional regulator, AraC family | sig. | 34 | 30 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS20105 | | helix-turn-helix domain-containing protein | insig. | 34 | 30 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS20105 | | helix-turn-helix domain-containing protein | insig. | 34 | 30 |
| | Pseudomonas simiae WCS417 | PS417_18210 | | AraC family transcriptional regulator | insig. | 34 | 30 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS27940 | | helix-turn-helix domain-containing protein | insig. | 30 | 75 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_21115 | | AraC family transcriptional regulator | insig. | 30 | 75 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS47695 | | helix-turn-helix domain-containing protein | insig. | 30 | 75 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_00685 | | AraC family transcriptional regulator | insig. | 34 | 29 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_224 | | transcription factor nitR | insig. | 34 | 29 |
| | Pseudomonas sp. RS175 | PFR28_00797 | | putative HTH-type transcriptional regulator | insig. | 38 | 24 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2923 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 29 | 32 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS08945 | | helix-turn-helix domain-containing protein | insig. | 26 | 34 |
| | Pseudomonas simiae WCS417 | PS417_22210 | | AraC family transcriptional regulator | insig. | 39 | 24 |
| | Methylophilus sp. DMC18 | GFF890 | | HTH-type transcriptional activator RhaR | insig. | 31 | 31 |
| | Pseudomonas sp. S08-1 | OH686_20745 | | Transcriptional regulator, AraC family | insig. | 37 | 29 |
| | Rahnella sp. WP5 | EX31_RS13520 | | AraC family transcriptional regulator | insig. | 33 | 30 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08500 | | hybrid sensor histidine kinase/response regulator transcription factor | strong | 30 | 28 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_15130 | | AraC family transcriptional regulator | cofit | 26 | 60 |
| | Klebsiella michiganensis M5al | BWI76_RS00825 | | AraC family transcriptional regulator | insig. | 35 | 32 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04577 | | putative HTH-type transcriptional regulator | cofit | 38 | 24 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02881 | | response regulator receiver domain protein | insig. | 29 | 29 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS23835 | | AraC family transcriptional regulator | insig. | 38 | 24 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS23835 | | AraC family transcriptional regulator | insig. | 38 | 24 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS11435 | | two-component regulator propeller domain-containing protein | cofit | 29 | 29 |
| | Pseudomonas protegens RBAN4 | FABNJH_08255 | araC | AraC family transcriptional regulator | insig. | 40 | 24 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0267 | | two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) | sig. | 28 | 29 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1576 | | transcriptional regulator, AraC family (RefSeq) | insig. | 50 | 17 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2635 | | Transcriptional regulator, AraC family | insig. | 37 | 24 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS13565 | | hybrid sensor histidine kinase/response regulator transcription factor | insig. | 32 | 27 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS08240 | | substrate-binding domain-containing protein | strong | 29 | 36 |
| | Pseudomonas simiae WCS417 | PS417_01425 | | AraC family transcriptional regulator | insig. | 37 | 29 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2860 | | two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) | insig. | 30 | 29 |
| | Enterobacter sp. TBS_079 | MPMX20_04525 | | HTH-type transcriptional activator RhaR | insig. | 30 | 44 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3136 | | Uncharacterized protein ygiV | insig. | 43 | 20 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_04000 | | AraC family transcriptional regulator | insig. | 37 | 24 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3542 | | Transcriptional regulator, AraC family | insig. | 35 | 24 |
| | Azospirillum sp. SherDot2 | MPMX19_01363 | | HTH-type transcriptional activator RhaS | insig. | 32 | 30 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2611 | | AraC-type DNA-binding domain-containing proteins | insig. | 31 | 30 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04394 | | response regulator receiver domain protein | strong | 31 | 29 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS13435 | | helix-turn-helix domain-containing protein | insig. | 25 | 34 |
| | Rhodopseudomonas palustris CGA009 | TX73_009975 | | helix-turn-helix domain-containing protein | insig. | 22 | 87 |
| | Pseudomonas sp. DMC3 | GFF2389 | | hypothetical protein | cofit | 35 | 24 |
| | Dickeya dadantii 3937 | DDA3937_RS07320 | | helix-turn-helix domain-containing protein | insig. | 32 | 31 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2897 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 27 | 32 |
| | Pseudomonas putida KT2440 | PP_2173 | | Transcriptional regulator, AraC family | sig. | 46 | 15 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4414 | | Transcriptional regulator, AraC family | insig. | 38 | 24 |
| | Pseudomonas segetis P6 | ACVTMO_RS14495 | | AraC family transcriptional regulator | insig. | 33 | 29 |
| | Variovorax sp. OAS795 | ABID97_RS13035 | | AraC family transcriptional regulator | insig. | 29 | 29 |
| | Klebsiella michiganensis M5al | BWI76_RS12815 | | transcriptional regulator FeaR | insig. | 23 | 81 |
| | Sinorhizobium meliloti 1021 | SMc02609 | | transcriptional regulator | insig. | 43 | 23 |
| | Pseudomonas orientalis W4I3 | QF045_RS24340 | | AraC family transcriptional regulator | insig. | 39 | 24 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS12420 | | GyrI-like domain-containing protein | insig. | 38 | 29 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_05170 | | AraC family transcriptional regulator | insig. | 37 | 31 |
| | Pectobacterium carotovorum WPP14 | HER17_RS19395 | | AraC family transcriptional regulator | cofit | 31 | 32 |
| | Sphingobium sp. HT1-2 | GFF460 | | Transcriptional regulator, AraC family | cofit | 28 | 46 |
| | Pseudomonas sp. SVBP6 | COO64_RS23290 | | GyrI-like domain-containing protein | insig. | 37 | 31 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_18475 | | AraC family transcriptional regulator | insig. | 35 | 24 |
| | Pseudomonas sp. BP01 | JOY50_RS05980 | | helix-turn-helix domain-containing protein | insig. | 28 | 47 |
| | Rhodopseudomonas palustris CGA009 | TX73_024245 | | helix-turn-helix transcriptional regulator | insig. | 38 | 25 |
| | Variovorax sp. SCN45 | GFF456 | | Transcriptional regulator, AraC family | insig. | 30 | 54 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS21075 | | AraC family transcriptional regulator | insig. | 28 | 47 |
| | Dickeya dianthicola ME23 | DZA65_RS08735 | | helix-turn-helix domain-containing protein | insig. | 31 | 31 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS05725 | | response regulator | insig. | 24 | 36 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS01480 | | two-component system response regulator | insig. | 28 | 34 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS09900 | | two-component regulator propeller domain-containing protein | insig. | 31 | 28 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS29820 | | AraC family transcriptional regulator | insig. | 35 | 28 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS11370 | | two-component regulator propeller domain-containing protein | insig. | 30 | 29 |
| | Pseudomonas segetis P6 | ACVTMO_RS09970 | feaR | transcriptional regulator FeaR | insig. | 27 | 56 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00787 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | insig. | 23 | 28 |
| | Pseudomonas sp. S08-1 | OH686_02580 | | hypothetical protein | insig. | 40 | 21 |
| | Klebsiella michiganensis M5al | BWI76_RS23095 | | hypothetical protein | insig. | 32 | 28 |
| | Dickeya dianthicola 67-19 | HGI48_RS08140 | | helix-turn-helix domain-containing protein | cofit | 31 | 31 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS10265 | | hypothetical protein | insig. | 25 | 32 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0981 | | two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) | insig. | 23 | 28 |
| | Pseudomonas stutzeri RCH2 | Psest_1877 | | AraC-type DNA-binding domain-containing proteins | insig. | 38 | 26 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03096 | | response regulator receiver domain protein | cofit | 38 | 16 |
| | Erwinia amylovora T8 | OLJFJH_03390 | | superoxide response transcriptional regulator SoxS | insig. | 36 | 28 |
| | Sinorhizobium meliloti 1021 | SMa1476 | | AraC family transcriptional regulator | insig. | 35 | 24 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02757 | | response regulator receiver domain protein | insig. | 31 | 36 |
| | Agrobacterium fabrum C58 | Atu3995 | | AraC family transcriptional regulator | insig. | 29 | 38 |
| | Cellulophaga baltica 18 | M666_RS20735 | | helix-turn-helix transcriptional regulator | no data | 29 | 27 |
| | Methylophilus sp. DMC18 | GFF1441 | | Transcriptional activator NphR | insig. | 21 | 90 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_06800 | | AraC family transcriptional regulator | insig. | 44 | 20 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_83 | | transcriptional regulator, AraC family | insig. | 36 | 29 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08780 | | hybrid sensor histidine kinase/response regulator transcription factor | insig. | 32 | 29 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS10925 | | response regulator | insig. | 29 | 36 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS15170 | | response regulator | insig. | 29 | 36 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2971 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 28 | 27 |
| | Agrobacterium fabrum C58 | Atu4659 | | AraC family transcriptional regulator | strong | 27 | 50 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_11235 | soxS | superoxide response transcriptional regulator SoxS | cofit | 39 | 28 |
| | Erwinia tracheiphila SCR3 | LU632_RS23250 | soxS | superoxide response transcriptional regulator SoxS | insig. | 39 | 28 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS09985 | | substrate-binding domain-containing protein | sig. | 36 | 24 |
| | Pectobacterium carotovorum WPP14 | HER17_RS07425 | | helix-turn-helix domain-containing protein | insig. | 29 | 31 |
| | Serratia liquefaciens MT49 | IAI46_04495 | | transcriptional regulator FeaR | insig. | 28 | 49 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS04050 | | helix-turn-helix domain-containing protein | insig. | 27 | 28 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1490 | | Transcriptional regulator, AraC family | insig. | 24 | 89 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS14605 | | response regulator | insig. | 21 | 28 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS18295 | | response regulator | sig. | 21 | 28 |
| | Paraburkholderia graminis OAS925 | ABIE53_004405 | | AraC-like DNA-binding protein | strong | 33 | 30 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_10640 | | AraC family transcriptional regulator | insig. | 33 | 29 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS08910 | | response regulator | insig. | 29 | 27 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02694 | | response regulator receiver domain protein | insig. | 26 | 30 |
| | Pseudomonas stutzeri RCH2 | Psest_0752 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | sig. | 38 | 24 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3996 | | Transcriptional regulator, AraC family | insig. | 33 | 29 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0480 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 26 | 60 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10040 | | AraC family transcriptional regulator | insig. | 42 | 18 |
| | Ralstonia solanacearum UW163 | UW163_RS03540 | | AraC family transcriptional regulator | insig. | 42 | 18 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS05545 | | AraC family transcriptional regulator | insig. | 41 | 18 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2846 | | Transcriptional regulator, AraC family | insig. | 35 | 29 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS03030 | | response regulator | insig. | 29 | 27 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3172 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 28 | 29 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS07135 | | response regulator | insig. | 25 | 27 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS15945 | | helix-turn-helix domain-containing protein | insig. | 25 | 32 |
| | Klebsiella michiganensis M5al | BWI76_RS01970 | | AraC family transcriptional regulator | insig. | 37 | 20 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_480 | | Transcriptional regulator, AraC family | insig. | 32 | 29 |
| | Cellulophaga baltica 18 | M666_RS00005 | | two-component regulator propeller domain-containing protein | insig. | 30 | 26 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4178 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 28 | 27 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c13840 | | putative transcriptional regulator, AraC family | strong | 27 | 34 |
| | Pseudomonas sp. RS175 | PFR28_02003 | | HTH-type transcriptional activator RhaR | insig. | 35 | 29 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS17585 | pocR;go_function=DNA-binding | transcriptional regulator PocR | insig. | 31 | 28 |
| | Enterobacter sp. TBS_079 | MPMX20_02136 | | Transcriptional activator FeaR | insig. | 24 | 66 |
| | Rahnella sp. WP5 | EX31_RS24135 | | AraC family transcriptional regulator | insig. | 38 | 25 |
| | Pseudomonas simiae WCS417 | PS417_00965 | | AraC family transcriptional regulator | insig. | 33 | 29 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_03665 | | regulatory protein PocR | insig. | 31 | 28 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02007 | | Transcriptional activator FeaR | cofit | 29 | 43 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS23330 | | AraC family transcriptional regulator | insig. | 39 | 18 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4154 | | Transcriptional regulator, AraC family | insig. | 38 | 26 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS36520 | | AraC family transcriptional regulator | insig. | 34 | 29 |
| | Pseudomonas sp. DMC3 | GFF4237 | | HTH-type transcriptional regulator VirS | cofit | 33 | 29 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS11975 | | helix-turn-helix domain-containing protein | insig. | 22 | 92 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1904 | | transcriptional regulator, AraC-type (NCBI ptt file) | insig. | 37 | 18 |
| | Paraburkholderia graminis OAS925 | ABIE53_000364 | | AraC family ethanolamine operon transcriptional activator | insig. | 34 | 32 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01673 | | response regulator receiver domain protein | insig. | 28 | 28 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03607 | | putative flagellar protein FliS | insig. | 24 | 30 |
| | Rahnella sp. WP5 | EX31_RS08275 | | AraC family transcriptional regulator | insig. | 38 | 29 |
| | Acinetobacter radioresistens SK82 | MPMX26_03085 | | HTH-type transcriptional regulator NimR | no data | 35 | 25 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4124 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 27 | 29 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS11200 | | hybrid sensor histidine kinase/response regulator transcription factor | insig. | 29 | 29 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS09170 | | response regulator | cofit | 24 | 28 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS13580 | | response regulator | strong | 24 | 28 |
| | Pseudomonas sp. SVBP6 | COO64_RS23480 | | response regulator transcription factor | insig. | 41 | 19 |
| | Pseudomonas sp. RS175 | PFR28_00263 | | HTH-type transcriptional activator RhaR | insig. | 41 | 21 |
| | Rahnella sp. WP5 | EX31_RS01485 | | helix-turn-helix domain-containing protein | insig. | 38 | 21 |
| | Klebsiella michiganensis M5al | BWI76_RS00690 | | transcriptional activator RhaS | strong | 35 | 25 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS16335 | | hybrid sensor histidine kinase/response regulator transcription factor | strong | 33 | 27 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1718 | | Transcriptional regulator, AraC family | insig. | 33 | 29 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02182 | | response regulator receiver domain protein | cofit | 28 | 28 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04931 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | cofit | 27 | 29 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04977 | | response regulator receiver domain protein | cofit | 27 | 29 |
| | Sinorhizobium meliloti 1021 | SM_b20859 | | AraC family transcriptional regulator | insig. | 26 | 82 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS13625 | | hypothetical protein | insig. | 25 | 29 |