| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF5976 | | Transcriptional regulator, AraC family | insig. | 100 | 100 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS26745 | | AraC family transcriptional regulator | insig. | 51 | 93 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33185 | | AraC family transcriptional regulator | insig. | 50 | 87 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS09535 | | AraC family transcriptional regulator | insig. | 47 | 94 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS06530 | | helix-turn-helix domain-containing protein | insig. | 43 | 93 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS11190 | | helix-turn-helix domain-containing protein | insig. | 42 | 92 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS38340 | | AraC family transcriptional regulator | insig. | 76 | 32 |
| o | Agrobacterium fabrum C58 | Atu4132 | | AraC family transcriptional regulator | insig. | 28 | 92 |
| o | Sinorhizobium meliloti 1021 | SMc00479 | | transcriptional regulator | insig. | 25 | 89 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_4386 | | Transcriptional regulator, AraC family | insig. | 27 | 93 |
| o | Rhodopseudomonas palustris CGA009 | TX73_008435 | | helix-turn-helix domain-containing protein | insig. | 27 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33405 | | hypothetical protein | insig. | 28 | 94 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS18500 | | AraC family transcriptional regulator | insig. | 29 | 74 |
| | Sinorhizobium meliloti 1021 | SM_b20457 | | transcriptional regulator transcription regulator protein | insig. | 23 | 93 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1186 | | AraC-type DNA-binding domain-containing proteins | insig. | 27 | 95 |
| o | Paraburkholderia graminis OAS925 | ABIE53_005740 | | AraC-like DNA-binding protein | sig. | 25 | 93 |
| o | Caulobacter crescentus NA1000 | CCNA_00750 | | FeaR-family transcriptional regulator | strong | 26 | 88 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_00750 | | FeaR-family transcriptional regulator | cofit | 26 | 88 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2213 | | transcriptional regulator, AraC family | insig. | 25 | 90 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2213 | | transcriptional regulator, AraC family | insig. | 25 | 90 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS01925 | | AraC family transcriptional regulator | insig. | 28 | 61 |
| | Variovorax sp. OAS795 | ABID97_RS26140 | | acetamidase/formamidase family protein | insig. | 33 | 37 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS19895 | | AraC family transcriptional regulator | insig. | 37 | 33 |
| | Escherichia coli BL21 | ECD_01356 | | transcriptional activator for tynA and feaB | no data | 26 | 62 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02327 | | Transcriptional activator FeaR | insig. | 26 | 62 |
| | Variovorax sp. SCN45 | GFF5188 | | no description | insig. | 26 | 90 |
| | Variovorax sp. OAS795 | ABID97_RS24570 | | helix-turn-helix domain-containing protein | insig. | 29 | 50 |
| | Pseudomonas sp. SVBP6 | COO64_RS13730 | feaR | transcriptional regulator FeaR | insig. | 35 | 29 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1324 | | Transcriptional regulator, AraC family | insig. | 34 | 37 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02372 | | Transcriptional activator FeaR | no data | 35 | 29 |
| | Escherichia coli ECOR27 | NOLOHH_19510 | feaR | transcriptional regulator FeaR | insig. | 25 | 62 |
| | Escherichia coli ECRC62 | BNILDI_17965 | feaR | transcriptional regulator FeaR | cofit | 25 | 62 |
| | Escherichia coli BW25113 | b1384 | feaR | DNA-binding transcriptional dual regulator (NCBI) | sig. | 25 | 62 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_25510 | | transcriptional regulator | insig. | 35 | 29 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS21385 | | AraC family transcriptional regulator | insig. | 31 | 49 |
| | Ralstonia solanacearum UW163 | UW163_RS17805 | | AraC family transcriptional regulator | no data | 31 | 49 |
| | Ralstonia solanacearum UW163 | UW163_RS23635 | | AraC family transcriptional regulator | no data | 31 | 49 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3207 | | Transcriptional regulator, AraC family | insig. | 30 | 58 |
| | Variovorax sp. OAS795 | ABID97_RS13065 | | helix-turn-helix domain-containing protein | insig. | 29 | 63 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS02940 | | response regulator | insig. | 34 | 29 |
| | Pseudomonas orientalis W4I3 | QF045_RS12855 | | transcriptional regulator FeaR | insig. | 33 | 29 |
| | Paraburkholderia graminis OAS925 | ABIE53_001928 | | acetamidase/formamidase/AraC-like DNA-binding protein | insig. | 29 | 52 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS04695 | | AraC family transcriptional regulator | insig. | 25 | 70 |
| | Pseudomonas simiae WCS417 | PS417_17900 | | transcriptional regulator | insig. | 34 | 29 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS05430 | | hybrid sensor histidine kinase/response regulator transcription factor | insig. | 30 | 32 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS12065 | | helix-turn-helix domain-containing protein | insig. | 24 | 91 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_16340 | | AraC family transcriptional regulator | insig. | 43 | 24 |
| | Variovorax sp. SCN45 | GFF6734 | | Transcriptional regulator, AraC family | insig. | 32 | 49 |
| | Cellulophaga baltica 18 | M666_RS02185 | | two-component regulator propeller domain-containing protein | insig. | 33 | 28 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS16000 | | transcriptional regulator FeaR | insig. | 33 | 29 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS16000 | | transcriptional regulator FeaR | insig. | 33 | 29 |
| | Variovorax sp. OAS795 | ABID97_RS17450 | | helix-turn-helix domain-containing protein | insig. | 24 | 93 |
| | Caulobacter crescentus NA1000 | CCNA_02482 | | AraC-family transcriptional regulator | cofit | 27 | 90 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02482 | | AraC-family transcriptional regulator | cofit | 27 | 90 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2340 | | Transcriptional regulator, AraC family | insig. | 32 | 44 |
| | Pseudomonas putida KT2440 | PP_3516 | | Transcriptional regulator, AraC family | strong | 23 | 90 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS40200 | | AraC family transcriptional regulator | insig. | 41 | 24 |
| | Escherichia coli BL21 | ECD_03839 | | AraC family putative transcriptional activator | insig. | 33 | 47 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04096 | | HTH-type transcriptional activator RhaS | insig. | 33 | 47 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS10630 | | helix-turn-helix domain-containing protein | insig. | 31 | 34 |
| | Variovorax sp. OAS795 | ABID97_RS13025 | | helix-turn-helix domain-containing protein | insig. | 27 | 62 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0008 | | transcriptional regulator, AraC family | insig. | 24 | 60 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0008 | | transcriptional regulator, AraC family | insig. | 24 | 60 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_20980 | | transcriptional regulator FeaR | insig. | 23 | 89 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS00840 | | AraC family transcriptional regulator | sig. | 41 | 24 |
| | Shewanella loihica PV-4 | Shew_0371 | | AraC family transcriptional regulator (RefSeq) | insig. | 36 | 25 |
| | Escherichia coli ECOR27 | NOLOHH_05750 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 33 | 47 |
| | Escherichia coli ECOR38 | HEPCGN_12250 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 33 | 47 |
| | Escherichia coli ECRC100 | OKFHMN_13605 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 33 | 47 |
| | Escherichia coli ECRC101 | MCAODC_04105 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 33 | 47 |
| | Escherichia coli ECRC102 | NIAGMN_11355 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 33 | 47 |
| | Escherichia coli ECRC62 | BNILDI_05775 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 33 | 47 |
| | Escherichia coli ECRC98 | JDDGAC_17230 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 33 | 47 |
| | Escherichia coli ECRC99 | KEDOAH_14555 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | no data | 33 | 47 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS22825 | | AraC family transcriptional regulator | insig. | 33 | 47 |
| | Escherichia coli BW25113 | b3954 | yijO | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 33 | 47 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02661 | | transcriptional regulator, AraC family with amidase-like domain | insig. | 33 | 37 |
| | Rahnella sp. WP5 | EX31_RS14690 | | helix-turn-helix transcriptional regulator | insig. | 33 | 35 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS14910 | | helix-turn-helix domain-containing protein | insig. | 31 | 34 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS47830 | feaR;go_function=DNA-binding | transcriptional regulator FeaR | insig. | 23 | 89 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS27820 | feaR;go_function=DNA-binding | transcriptional regulator FeaR | insig. | 23 | 89 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3750 | | Transcriptional activator feaR | insig. | 30 | 60 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01894 | | transcriptional regulator, AraC family | strong | 32 | 32 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_09345 | | AraC family transcriptional regulator | insig. | 34 | 35 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1645 | | Signal transduction histidine kinase | insig. | 29 | 29 |
| | Escherichia fergusonii Becca | EFB2_04660 | | HTH-type transcriptional activator RhaS | insig. | 32 | 47 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02865 | | HTH-type transcriptional activator RhaR | insig. | 36 | 31 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02648 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | cofit | 35 | 29 |
| | Rahnella sp. WP5 | EX31_RS16720 | | helix-turn-helix domain-containing protein | sig. | 32 | 36 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS32145 | | hypothetical protein | insig. | 36 | 34 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05614 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | insig. | 33 | 29 |
| | Acinetobacter baumannii LAC-4 | RR41_RS13635 | | transcriptional regulator FeaR | no data | 30 | 29 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4417 | | Helix-turn-helix domain | insig. | 30 | 44 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2623 | | transcriptional regulator, AraC family | insig. | 27 | 56 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS00635 | | substrate-binding domain-containing protein | strong | 29 | 36 |
| | Pseudomonas sp. SVBP6 | COO64_RS21800 | | AraC family transcriptional regulator | insig. | 38 | 24 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_28535 | | AraC family transcriptional regulator | insig. | 38 | 31 |
| | Pseudomonas sp. BP01 | JOY50_RS01115 | | AraC family transcriptional regulator | insig. | 34 | 30 |
| | Pseudomonas putida KT2440 | PP_4508 | | putative transcriptional regulator, AraC family | sig. | 34 | 30 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS20105 | | helix-turn-helix domain-containing protein | insig. | 34 | 30 |